Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000438-TA|BGIBMGA000438-PA|IPR000618|Insect cuticle
protein
(210 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0256 - 2083973-2084816,2084922-2086093 31 0.52
02_03_0381 - 18339290-18339994,18340083-18340103,18341925-183419... 31 0.68
02_05_0718 + 31203358-31203717,31203826-31204011 29 2.8
01_06_1328 + 36347963-36347984,36348609-36348764,36349083-363492... 29 3.7
06_02_0015 + 10599131-10600248,10601009-10602752 28 4.8
01_01_0187 + 1624159-1624279,1624530-1624590,1625118-1625574 28 4.8
07_01_1143 - 10711023-10711884,10713603-10713826,10714253-107145... 28 6.4
06_02_0213 + 13087707-13088423 28 6.4
06_03_0743 + 24069752-24070483,24071890-24072345 27 8.4
04_04_1237 - 31991817-31992569,31993452-31993550,31994343-319949... 27 8.4
>01_01_0256 - 2083973-2084816,2084922-2086093
Length = 671
Score = 31.5 bits (68), Expect = 0.52
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 25 HAASGQQDSQENSGERGI-YQYVQEQNEDVKVRQPTTHKYQGVHYPVHYPAPVQ-HEAPA 82
HA QQ ++ + QYV QN+ + P T + + H+P P Q + P
Sbjct: 450 HAPPPQQQPPPPQQQQPVPQQYVTAQNQHF-IHNPATGTFIPIQSYYHHPVPQQAPQPPM 508
Query: 83 AKPVYKP-QVHYTRPQEGFSF 102
+PV +P Q H P G +
Sbjct: 509 PQPVPQPQQSHAFDPNTGMYY 529
>02_03_0381 -
18339290-18339994,18340083-18340103,18341925-18341982,
18342084-18342220,18342480-18342650
Length = 363
Score = 31.1 bits (67), Expect = 0.68
Identities = 20/102 (19%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 5 QFHRGSRG--RKNNMLAKSIIHHAASGQQDSQENSGERGIYQYVQ----EQNEDVKVRQP 58
+F+RG+ G ++ K + +A G+ + +EN R + + + P
Sbjct: 91 EFYRGTHGFIKRGGYDPKKNVGYANLGKGEKEENWSVRISHLIPNFACLSGSGNYGSGYP 150
Query: 59 TTHKYQGVHYPVHYPAPVQHEAPAAKPVYKPQVHYTRPQEGF 100
H++ P+H P+ + H++P P ++ + + P G+
Sbjct: 151 PPHQHHMAPPPIHTPSRLSHDSPGGSP-WRSPMQFQAPMSGY 191
>02_05_0718 + 31203358-31203717,31203826-31204011
Length = 181
Score = 29.1 bits (62), Expect = 2.8
Identities = 23/98 (23%), Positives = 37/98 (37%), Gaps = 8/98 (8%)
Query: 72 YPAPVQHEAPAAKPVYKPQVHYTRPQEGFSFHRGVHLEQAPVY-------QQTEGHAHES 124
Y P Q P A+ + H RP + + H G + + P Y + T G +
Sbjct: 60 YDRPQQGRRPPAEETHLSAGHGRRPDDDEATHGGGYRKPKPAYGDDEQQRRHTSGGGRKK 119
Query: 125 H-DEPIDXXXXXXXXXXXKVEDPHTGDNKFQHEIRDGD 161
H + D K +D G+ K +++ RD D
Sbjct: 120 HGGDDDDGSGDERKPRYKKHDDDDDGERKPRYKKRDDD 157
>01_06_1328 +
36347963-36347984,36348609-36348764,36349083-36349261,
36349347-36349442,36349525-36349594,36349635-36349705,
36350654-36351286
Length = 408
Score = 28.7 bits (61), Expect = 3.7
Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 4/78 (5%)
Query: 24 HHAASGQQDSQENSGERGIYQ----YVQEQNEDVKVRQPTTHKYQGVHYPVHYPAPVQHE 79
+HA + Q S GIYQ Y + V R T +Q +P+ + +Q
Sbjct: 321 YHALNSQHVIPALSQPAGIYQTVGPYQSNGHPQVYTRDVQTVGHQNYRHPMGHNTQLQTV 380
Query: 80 APAAKPVYKPQVHYTRPQ 97
P +PQVH T Q
Sbjct: 381 EPYQSNNSQPQVHATSIQ 398
>06_02_0015 + 10599131-10600248,10601009-10602752
Length = 953
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 26 AASGQQDSQENSGERGIYQYVQEQ 49
AA G+ D Q++SGER QY++ +
Sbjct: 755 AAGGEDDKQQDSGERHTEQYMKRK 778
>01_01_0187 + 1624159-1624279,1624530-1624590,1625118-1625574
Length = 212
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/16 (62%), Positives = 12/16 (75%)
Query: 68 YPVHYPAPVQHEAPAA 83
YP YPAP +H+ PAA
Sbjct: 131 YPATYPAPPRHQQPAA 146
>07_01_1143 -
10711023-10711884,10713603-10713826,10714253-10714522,
10715071-10715175
Length = 486
Score = 27.9 bits (59), Expect = 6.4
Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
Query: 32 DSQENSGERGIYQYVQEQ---NEDVKVRQPTTHKYQGVHYPVHYPAPVQHEAPAAKPVYK 88
+SQE G+ G Q Q Q + +P Y G YP +YP + P P +
Sbjct: 381 ESQEGDGKPGPQQAGQGQASSSSGQSYPEPPPPYYHGGQYPPYYPPYGGYMPPPRMPYQQ 440
Query: 89 P 89
P
Sbjct: 441 P 441
>06_02_0213 + 13087707-13088423
Length = 238
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/64 (23%), Positives = 30/64 (46%)
Query: 2 LIHQFHRGSRGRKNNMLAKSIIHHAASGQQDSQENSGERGIYQYVQEQNEDVKVRQPTTH 61
++ +FH + RK++ + +I H ++ + + N + +Q QNE +K Q
Sbjct: 65 VLSRFHATTTSRKHSSMGVTIQHDNSATIKLHELNQQHIELQNQLQAQNEKMKALQEVAK 124
Query: 62 KYQG 65
K G
Sbjct: 125 KESG 128
>06_03_0743 + 24069752-24070483,24071890-24072345
Length = 395
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 5/72 (6%)
Query: 61 HKYQGVHYPVHYPAPVQHEAP----AAKPVYKPQVHYTRPQEGFSFHRGVH-LEQAPVYQ 115
H + H+P+H+P P P + +Y +H P + L P
Sbjct: 13 HHHHRSHHPLHFPPPPPPPPPPYAASFSGLYSSYLHPPPPPSSPPIREALPLLSLTPSTT 72
Query: 116 QTEGHAHESHDE 127
+ H H HD+
Sbjct: 73 HDDDHHHRRHDQ 84
>04_04_1237 -
31991817-31992569,31993452-31993550,31994343-31994976,
31995329-31995585
Length = 580
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 8 RGSRGRKNNMLAKSIIHHAASGQQDSQENSGERGIYQYV 46
RG GR+ + AA+G+Q+ + G RG+ + V
Sbjct: 401 RGGGGRRRRRRRRPSAAAAAAGEQEGKVRQGPRGVQEQV 439
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.131 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,689,184
Number of Sequences: 37544
Number of extensions: 288610
Number of successful extensions: 534
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 529
Number of HSP's gapped (non-prelim): 10
length of query: 210
length of database: 14,793,348
effective HSP length: 79
effective length of query: 131
effective length of database: 11,827,372
effective search space: 1549385732
effective search space used: 1549385732
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 58 (27.5 bits)
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