Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000438-TA|BGIBMGA000438-PA|IPR000618|Insect cuticle
protein
(210 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 33 0.20
Z96047-4|CAB09414.1| 796|Caenorhabditis elegans Hypothetical pr... 32 0.35
AL132876-24|CAD21671.1| 418|Caenorhabditis elegans Hypothetical... 31 0.61
AC024778-1|AAF60567.1| 393|Caenorhabditis elegans Collagen prot... 31 0.61
U13876-14|AAA21168.1| 2500|Caenorhabditis elegans Not-like (yeas... 30 1.1
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 30 1.1
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 30 1.1
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 30 1.1
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 30 1.1
Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z66565-7|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 29 1.9
AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical ... 29 1.9
Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical pr... 29 2.5
U97593-7|AAB52878.1| 591|Caenorhabditis elegans Prion-like-(q/n... 29 3.2
U97593-5|AAB52880.1| 1175|Caenorhabditis elegans Prion-like-(q/n... 29 3.2
Z49128-3|CAA88958.1| 832|Caenorhabditis elegans Hypothetical pr... 28 4.3
U97593-6|AAB52879.2| 925|Caenorhabditis elegans Prion-like-(q/n... 28 4.3
U42436-6|AAM15564.1| 615|Caenorhabditis elegans Not-like (yeast... 28 4.3
U42436-5|AAF99894.2| 796|Caenorhabditis elegans Not-like (yeast... 28 4.3
U00048-1|AAB53825.2| 425|Caenorhabditis elegans Lethal protein ... 28 4.3
AJ010553-1|CAA09234.1| 425|Caenorhabditis elegans LET-756 prote... 28 4.3
Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z72512-6|CAD44143.1| 660|Caenorhabditis elegans Hypothetical pr... 27 7.5
AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein. 27 7.5
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 27 7.5
AF078157-2|AAN84818.1| 176|Caenorhabditis elegans Hypothetical ... 27 7.5
AF078157-1|AAG24071.1| 235|Caenorhabditis elegans Hypothetical ... 27 7.5
Z70756-9|CAA94796.1| 228|Caenorhabditis elegans Hypothetical pr... 27 9.9
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p... 27 9.9
U55374-6|AAP82641.1| 286|Caenorhabditis elegans Uncoordinated p... 27 9.9
U55374-5|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated p... 27 9.9
U55374-4|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p... 27 9.9
U50071-8|AAV34806.1| 795|Caenorhabditis elegans Uncoordinated p... 27 9.9
U50071-7|AAV34805.1| 905|Caenorhabditis elegans Uncoordinated p... 27 9.9
U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated p... 27 9.9
U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated p... 27 9.9
U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated p... 27 9.9
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 27 9.9
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 27 9.9
U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin pr... 27 9.9
U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin pr... 27 9.9
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 27 9.9
U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein. 27 9.9
U21732-1|AAA85853.1| 970|Caenorhabditis elegans UNC-44 protein. 27 9.9
U21731-1|AAA85852.1| 985|Caenorhabditis elegans UNC-44 protein. 27 9.9
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ... 27 9.9
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 32.7 bits (71), Expect = 0.20
Identities = 38/191 (19%), Positives = 56/191 (29%), Gaps = 11/191 (5%)
Query: 24 HHAASGQQDSQENSGERGIYQYVQEQNEDVKVRQPTTHKYQGVHYPVHYPAPVQHEAPAA 83
HH G S + G G + + + H GVH+ H H APA
Sbjct: 548 HHGHHGSHHSPAHHGHHGEHHHAPAHHG-----HHGHHGSHGVHHGHHESHGHGHHAPAH 602
Query: 84 KPVYKPQ-VHYTRPQEGFSFHRG---VHLEQAPVYQQTEGHAHESHDEPIDXXXXXXXXX 139
+ VH+ G+ H G H AP ++ E H H
Sbjct: 603 HGHHGEHGVHHGHHGAGYGAHHGHHGAHHHHAPHHEHHEHHGDHHHGSH-GVHHGHHGTH 661
Query: 140 XXKVEDPHTGDNKFQHEIRDGDVVKGVYGLHEADGSVRTVEYS-SDKHKGFSAIVKHSAP 198
H G + H G +G H G+ + D + HS
Sbjct: 662 HSLAHHGHHGGHGTHHGAHHSPAHHGHHGAHHEHGAHHGAHHGHHDDKENHHHHGHHSKH 721
Query: 199 GQHVHIESHHE 209
+ H + H+
Sbjct: 722 SKKQHTKKSHK 732
Score = 29.5 bits (63), Expect = 1.9
Identities = 36/196 (18%), Positives = 54/196 (27%), Gaps = 11/196 (5%)
Query: 24 HHAASGQQDSQENSGERGIYQYVQEQNEDVKVRQPTTHKY----QGVHYP----VHYPAP 75
HH + S +S ++ED K P H++ G H+ H+
Sbjct: 334 HHKKAASSSSSSSSSSSSSSSSSSSESEDEKKHAPAHHEHHEHKDGAHHEHKEGEHHEHA 393
Query: 76 VQHEAPAAKPVYKPQVHYTRPQEGFSFHRGVHLEQAPVYQQTEGH--AHESHDEPIDXXX 133
H+ + + H T G H + H HESH
Sbjct: 394 AHHDEHGVHHRHHGEHHGTHHSPAHHGEHGTHHGHHGEHHHAPAHHGHHESHGHGHHSPA 453
Query: 134 XXXXXXXXKVEDPHTGDNKFQHEIRDGDVVKGVYGLHEA-DGSVRTVEYSSDKHKGFSAI 192
H G + H G +G H GS + + + A
Sbjct: 454 HHGHHGEHHHAPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAP 513
Query: 193 VKHSAPGQHVHIESHH 208
H G+H HH
Sbjct: 514 AHHGHHGEHGTHHGHH 529
Score = 29.5 bits (63), Expect = 1.9
Identities = 44/219 (20%), Positives = 64/219 (29%), Gaps = 15/219 (6%)
Query: 4 HQFHRGSRGRKNNMLAK--SIIHHAASGQQD-SQENSGERGIYQYVQEQNEDVKVRQPTT 60
H H G G + S HH G+ + + G G + + P
Sbjct: 480 HHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGEHG-THHGHHGEHHHAPAH 538
Query: 61 HKYQGVHYPVHYPAPVQHEAPAAKPVYKPQVHYTRPQEGFSFHRGVH-LEQAPVYQQTEG 119
H + G H H+ H +PA + + H+ G H G H + G
Sbjct: 539 HGHHGEH-GTHHGHHGSHHSPAHHG-HHGEHHHAPAHHGHHGHHGSHGVHHGHHESHGHG 596
Query: 120 H---AHESHDEPIDXXXXXXXXXXXKVEDPHTGDNKF----QHEIRDGDVVKGVYGLHEA 172
H AH H H + +H GD G +G+H
Sbjct: 597 HHAPAHHGHHGEHGVHHGHHGAGYGAHHGHHGAHHHHAPHHEHHEHHGDHHHGSHGVHHG 656
Query: 173 DGSVRTVEYSSDKHKGFSAIV-KHSAPGQHVHIESHHEN 210
H G H +P H H +HHE+
Sbjct: 657 HHGTHHSLAHHGHHGGHGTHHGAHHSPAHHGHHGAHHEH 695
>Z96047-4|CAB09414.1| 796|Caenorhabditis elegans Hypothetical
protein DY3.5 protein.
Length = 796
Score = 31.9 bits (69), Expect = 0.35
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 26 AASGQQDSQENSGERGIYQYVQEQNEDVKVRQPTTHKYQGVHYPVHYPAPVQHEAPAAKP 85
A QQ +Q+ + + Q +++Q + +Q ++Y G+ P Y VQ +AP +
Sbjct: 428 ARLAQQQAQQAQQAQQLQQQIRQQQLQQQQQQQQQNQYGGMQ-PNPY---VQPQAPVQQQ 483
Query: 86 VYKPQVHYTRPQEGFSFHRGVHLEQAPVYQ 115
+ +P PQ+ +F + QAP+ Q
Sbjct: 484 IAQPPPQQPAPQQPMNF---LPAPQAPIIQ 510
>AL132876-24|CAD21671.1| 418|Caenorhabditis elegans Hypothetical
protein Y105E8A.25 protein.
Length = 418
Score = 31.1 bits (67), Expect = 0.61
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 28 SGQQDSQENSGERGIYQYVQEQNEDVKVRQPTTHKYQGVHYPV-HYPAPVQHEAPAAKPV 86
S + + +S RG ++ ++ + + + H+ Q +H P HYP P A P
Sbjct: 157 SNENTNPLDSTPRGHSADDRKHSDLPAISEESEHEQQSIHIPYNHYPPHSSSVGPGAAPA 216
Query: 87 YKPQVHYTRP 96
+ V +T P
Sbjct: 217 VREVVEHTYP 226
>AC024778-1|AAF60567.1| 393|Caenorhabditis elegans Collagen protein
115 protein.
Length = 393
Score = 31.1 bits (67), Expect = 0.61
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 28 SGQQ-DSQENSGERGIYQYVQEQNEDVKVRQPTTHKYQGVHYPVHYPAPVQHEAPAAKPV 86
SGQQ DS N+ G Y++ E E ++ R+PT + Q + Y Q A++
Sbjct: 105 SGQQYDSTGNAATNGQYRFFPEVIEAIRARRPTLYSLQQDYNSGGYAG--QGGCGASQQG 162
Query: 87 YKPQVHYTRPQEG 99
Y + + PQ G
Sbjct: 163 YASRPVFVGPQTG 175
>U13876-14|AAA21168.1| 2500|Caenorhabditis elegans Not-like (yeast
ccr4/not complexcomponent) protein 1 protein.
Length = 2500
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 46 VQEQNEDVKVRQPTTHKYQGVHYPVHYPAPVQHEAP-AAKPVYKPQ 90
+Q+Q+ + P T Q +H P P+Q A A +P++ PQ
Sbjct: 706 LQQQHSQQSLPTPPTTSQQQIHVQQSVPGPIQRPAQFAPQPMFPPQ 751
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/61 (27%), Positives = 23/61 (37%)
Query: 69 PVHYPAPVQHEAPAAKPVYKPQVHYTRPQEGFSFHRGVHLEQAPVYQQTEGHAHESHDEP 128
P PAP + P +P T P E + V E APV + E +EP
Sbjct: 170 PAEEPAPAEEAPQEEVPAEEPVAEETAPAEEAAVEEPVVEEAAPVEEAPEAEETAPAEEP 229
Query: 129 I 129
+
Sbjct: 230 L 230
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/61 (27%), Positives = 23/61 (37%)
Query: 69 PVHYPAPVQHEAPAAKPVYKPQVHYTRPQEGFSFHRGVHLEQAPVYQQTEGHAHESHDEP 128
P PAP + P +P T P E + V E APV + E +EP
Sbjct: 120 PAEEPAPAEEAPQEEVPAEEPVAEETAPAEEAAVEEPVVEEAAPVEEAPEAEETAPAEEP 179
Query: 129 I 129
+
Sbjct: 180 L 180
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/61 (27%), Positives = 23/61 (37%)
Query: 69 PVHYPAPVQHEAPAAKPVYKPQVHYTRPQEGFSFHRGVHLEQAPVYQQTEGHAHESHDEP 128
P PAP + P +P T P E + V E APV + E +EP
Sbjct: 170 PAEEPAPAEEAPQEEVPAEEPVAEETAPAEEAAVEEPVVEEAAPVEEAPEAEETAPAEEP 229
Query: 129 I 129
+
Sbjct: 230 L 230
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/61 (27%), Positives = 23/61 (37%)
Query: 69 PVHYPAPVQHEAPAAKPVYKPQVHYTRPQEGFSFHRGVHLEQAPVYQQTEGHAHESHDEP 128
P PAP + P +P T P E + V E APV + E +EP
Sbjct: 170 PAEEPAPAEEAPQEEVPAEEPVAEETAPAEEAAVEEPVVEEAAPVEEAPEAEETAPAEEP 229
Query: 129 I 129
+
Sbjct: 230 L 230
>Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical protein
C05C9.3 protein.
Length = 1225
Score = 29.9 bits (64), Expect = 1.4
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 4 HQFHRGSRGRKNNM-LAKSIIHHAASGQQDSQENSGERGIYQYVQEQNEDVKVRQPTTHK 62
H +G R++ M ++ +HH Q+ Q NSG++ + Q+QN++ VRQ +
Sbjct: 1073 HYQQQGEMKRQDGMHQMQNQLHH----HQNFQFNSGQQATQVHEQQQNQNHHVRQAVQEE 1128
Query: 63 -YQGVHYPVHYPAPVQHEAPAAKPVYKPQVHYTRPQEGFSFHRGVHLEQAPVYQQTE 118
+Q +P H VQ + Q +++ Q+ + FH L PV Q +
Sbjct: 1129 VFQS--FPRH---DVQRHIHGQTNYQQNQRQHSQ-QQVYKFHMQPQLPIQPVPNQVQ 1179
>Z66565-7|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 69 PVHYPAPVQHEAPAAKPVYKPQVHYTRPQEGFSFHRG 105
P P P H PA +P+ KP Y +P + + G
Sbjct: 128 PQPEPQPEPHPEPAPEPIVKPYNSYAQPHNSYVRYGG 164
>AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical
protein H11E01.3 protein.
Length = 1464
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Query: 73 PAPV--QHEAPAAKPVYKPQVHYTRPQEGFSFHRGVHLEQA---PVYQQTEGHAHESHDE 127
P+PV + + P+A+ ++ E SFH H+++A PV H H
Sbjct: 610 PSPVASERDVPSAESPLVQSENFEHHAEVHSFHASEHIDEALPSPVQSVHSSHDHHDRSS 669
Query: 128 PI 129
P+
Sbjct: 670 PV 671
>Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical
protein R07E5.6 protein.
Length = 443
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/68 (23%), Positives = 29/68 (42%)
Query: 29 GQQDSQENSGERGIYQYVQEQNEDVKVRQPTTHKYQGVHYPVHYPAPVQHEAPAAKPVYK 88
G +D+Q+ ++ + +E+ + K R + + V + H+ PV PV
Sbjct: 329 GAKDAQKKKKQQDVVDKKKEKRKLKKTRTMEASRSREVSHEEHHQPPVLSTLATPSPVPS 388
Query: 89 PQVHYTRP 96
P V T P
Sbjct: 389 PSVPPTAP 396
>U97593-7|AAB52878.1| 591|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform b protein.
Length = 591
Score = 28.7 bits (61), Expect = 3.2
Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 1/84 (1%)
Query: 42 IYQYVQEQNEDVKVRQPTTHKYQGVHYPVHYPAPVQHEAPAAKPVYKPQVHYTRPQEGFS 101
+Y+ N+ + T H+ Q V +Y E + +PQ P + S
Sbjct: 261 VYEVSSNYNKSYSSQTTTQHQPQPVAANNNYSTSYHTERSSTTTAQQPQTIALPPPQNNS 320
Query: 102 FHRGVHLEQAPVYQQTE-GHAHES 124
H H P+ + GH+ +S
Sbjct: 321 SHTETHSSTGPIMMHSPGGHSMKS 344
>U97593-5|AAB52880.1| 1175|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform a protein.
Length = 1175
Score = 28.7 bits (61), Expect = 3.2
Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 1/84 (1%)
Query: 42 IYQYVQEQNEDVKVRQPTTHKYQGVHYPVHYPAPVQHEAPAAKPVYKPQVHYTRPQEGFS 101
+Y+ N+ + T H+ Q V +Y E + +PQ P + S
Sbjct: 845 VYEVSSNYNKSYSSQTTTQHQPQPVAANNNYSTSYHTERSSTTTAQQPQTIALPPPQNNS 904
Query: 102 FHRGVHLEQAPVYQQTE-GHAHES 124
H H P+ + GH+ +S
Sbjct: 905 SHTETHSSTGPIMMHSPGGHSMKS 928
>Z49128-3|CAA88958.1| 832|Caenorhabditis elegans Hypothetical
protein M03C11.3 protein.
Length = 832
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 36 NSGERGIYQYVQEQNEDVKVRQ-PTTHKYQGVHYPVHYPAP 75
N+G Y + NED+ V Q PT YQ +H P + P
Sbjct: 650 NNGIYLDYLFEDFMNEDICVSQLPTLVSYQSIHVPTYRTIP 690
>U97593-6|AAB52879.2| 925|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform c protein.
Length = 925
Score = 28.3 bits (60), Expect = 4.3
Identities = 22/101 (21%), Positives = 36/101 (35%), Gaps = 2/101 (1%)
Query: 26 AASGQQDSQENSGERGIYQYVQEQ-NEDVKVRQPTTHKYQGVHYPVHYPAPVQHEAPAAK 84
+A Q SQ + + Y N+ + T H+ Q V +Y E +
Sbjct: 578 SAYNSQSSQHQTKSIPVQNYQSSNYNKSYSSQTTTQHQPQPVAANNNYSTSYHTERSSTT 637
Query: 85 PVYKPQVHYTRPQEGFSFHRGVHLEQAPVYQQTE-GHAHES 124
+PQ P + S H H P+ + GH+ +S
Sbjct: 638 TAQQPQTIALPPPQNNSSHTETHSSTGPIMMHSPGGHSMKS 678
>U42436-6|AAM15564.1| 615|Caenorhabditis elegans Not-like (yeast
ccr4/not complexcomponent) protein 4, isoform b protein.
Length = 615
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/51 (27%), Positives = 23/51 (45%)
Query: 145 DPHTGDNKFQHEIRDGDVVKGVYGLHEADGSVRTVEYSSDKHKGFSAIVKH 195
DP +N+F+ +I DV + L D + +S + + G A KH
Sbjct: 177 DPEGNENEFEEDIHRNDVSDLMSKLDVNDDRLARTSFSENDYLGIPAPAKH 227
>U42436-5|AAF99894.2| 796|Caenorhabditis elegans Not-like (yeast
ccr4/not complexcomponent) protein 4, isoform a protein.
Length = 796
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/51 (27%), Positives = 23/51 (45%)
Query: 145 DPHTGDNKFQHEIRDGDVVKGVYGLHEADGSVRTVEYSSDKHKGFSAIVKH 195
DP +N+F+ +I DV + L D + +S + + G A KH
Sbjct: 358 DPEGNENEFEEDIHRNDVSDLMSKLDVNDDRLARTSFSENDYLGIPAPAKH 408
>U00048-1|AAB53825.2| 425|Caenorhabditis elegans Lethal protein 756
protein.
Length = 425
Score = 28.3 bits (60), Expect = 4.3
Identities = 25/118 (21%), Positives = 40/118 (33%), Gaps = 4/118 (3%)
Query: 11 RGRKNNMLAKSIIHHAASGQQDSQENSGERGIYQYVQEQNEDVKVRQPTTHKYQGVHYPV 70
R R++ + + I A + S R YQ Q+Q + R YP
Sbjct: 289 RRREDRLRKEEQIREARRQELKSLREEELRRRYQQQQQQQASTQTRYNRPQNPANP-YPT 347
Query: 71 HYPAPVQHEAPAAKPVYKP--QVHYTR-PQEGFSFHRGVHLEQAPVYQQTEGHAHESH 125
+ P P + + +P Y P Q T+ P H H + + H + H
Sbjct: 348 YRPLPTRSTVQSPRPAYNPYWQSPVTQAPHHNSHHHHHHHPRVSSSSDPQQRHQSQQH 405
>AJ010553-1|CAA09234.1| 425|Caenorhabditis elegans LET-756 protein
protein.
Length = 425
Score = 28.3 bits (60), Expect = 4.3
Identities = 25/118 (21%), Positives = 40/118 (33%), Gaps = 4/118 (3%)
Query: 11 RGRKNNMLAKSIIHHAASGQQDSQENSGERGIYQYVQEQNEDVKVRQPTTHKYQGVHYPV 70
R R++ + + I A + S R YQ Q+Q + R YP
Sbjct: 289 RRREDRLRKEEQIREARRQELKSLREEELRRRYQQQQQQQASTQTRYNRPQNPANP-YPT 347
Query: 71 HYPAPVQHEAPAAKPVYKP--QVHYTR-PQEGFSFHRGVHLEQAPVYQQTEGHAHESH 125
+ P P + + +P Y P Q T+ P H H + + H + H
Sbjct: 348 YRPLPTRSTVQSPRPAYNPYWQSPVTQAPHHNSHHHHHHHPRVSSSSDPQQRHQSQQH 405
>Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 48 EQNEDVKVRQPTTHKYQGVHYPVHYPAP--VQHEAPAAKPVY 87
++N ++ P H Y H+ HY P QH P + P+Y
Sbjct: 10 DENPPIESDVPMHHVYPSHHHHQHYQLPHLQQHPHPYSYPLY 51
>Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical
protein T23B5.3b protein.
Length = 540
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 48 EQNEDVKVRQPTTHKYQGVHYPVHYPAP--VQHEAPAAKPVY 87
++N ++ P H Y H+ HY P QH P + P+Y
Sbjct: 10 DENPPIESDVPMHHVYPSHHHHQHYQLPHLQQHPHPYSYPLY 51
>Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 48 EQNEDVKVRQPTTHKYQGVHYPVHYPAP--VQHEAPAAKPVY 87
++N ++ P H Y H+ HY P QH P + P+Y
Sbjct: 10 DENPPIESDVPMHHVYPSHHHHQHYQLPHLQQHPHPYSYPLY 51
>Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical
protein R03E1.1 protein.
Length = 1043
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/35 (31%), Positives = 13/35 (37%)
Query: 58 PTTHKYQGVHYPVHYPAPVQHEAPAAKPVYKPQVH 92
PT G+ P P+ AP PV P H
Sbjct: 221 PTDSSCSGISPSTRVPPPIPSRAPVMSPVQSPLTH 255
>Z72512-6|CAD44143.1| 660|Caenorhabditis elegans Hypothetical
protein R07B5.9 protein.
Length = 660
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 43 YQYVQEQNEDVKVRQPTTHKYQGVHYPVHYPAPVQHEAPAAKPVYKPQVHY 93
+Q+ Q+Q + + R QGVH + +P + PA P Y P +Y
Sbjct: 556 HQHQQQQPQQPQQRIAAPGVPQGVHPQMQFPMNAMNMMPAYPPFY-PYTNY 605
>AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein.
Length = 1043
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/35 (31%), Positives = 13/35 (37%)
Query: 58 PTTHKYQGVHYPVHYPAPVQHEAPAAKPVYKPQVH 92
PT G+ P P+ AP PV P H
Sbjct: 221 PTDSSCSGISPSTRVPPPIPSRAPVMSPVQSPLTH 255
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 69 PVHYPAPVQHEAPAAKP 85
P HYP P + +APAA P
Sbjct: 155 PEHYPGPPRPQAPAAPP 171
>AF078157-2|AAN84818.1| 176|Caenorhabditis elegans Hypothetical
protein F25E5.8b protein.
Length = 176
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 87 YKPQVHYTRPQEGFSFHRGVH--LEQAPVYQQTEGHAHESHDE 127
+KP+ H+ + G S + G H + P + +G H +H +
Sbjct: 44 HKPEEHHHKEHHGHSLYFGKHSGKKHLPPVVENDGDTHSNHSD 86
>AF078157-1|AAG24071.1| 235|Caenorhabditis elegans Hypothetical
protein F25E5.8a protein.
Length = 235
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 87 YKPQVHYTRPQEGFSFHRGVH--LEQAPVYQQTEGHAHESHDE 127
+KP+ H+ + G S + G H + P + +G H +H +
Sbjct: 44 HKPEEHHHKEHHGHSLYFGKHSGKKHLPPVVENDGDTHSNHSD 86
>Z70756-9|CAA94796.1| 228|Caenorhabditis elegans Hypothetical
protein T06E4.10 protein.
Length = 228
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/25 (48%), Positives = 13/25 (52%)
Query: 65 GVHYPVHYPAPVQHEAPAAKPVYKP 89
G+ P PAPV APA P Y P
Sbjct: 122 GLAAPAFAPAPVVAAAPALAPAYAP 146
>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
protein C34D4.14 protein.
Length = 2761
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/63 (23%), Positives = 24/63 (38%)
Query: 28 SGQQDSQENSGERGIYQYVQEQNEDVKVRQPTTHKYQGVHYPVHYPAPVQHEAPAAKPVY 87
SG D ++G Y++ N D++ T H+Y H P V + Y
Sbjct: 1517 SGWVDVTWDNGNANSYRFGANGNFDIERVTSTGHRYSTPSLASHVPTSVMEAVRRNRAFY 1576
Query: 88 KPQ 90
P+
Sbjct: 1577 TPK 1579
>U55374-6|AAP82641.1| 286|Caenorhabditis elegans Uncoordinated
protein 2, isoform d protein.
Length = 286
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Query: 142 KVEDPHTGDNKFQHEIRDGDVVKGVYGLHEADGSVRTVEYSSDKHKGFSAIVKHSAPGQH 201
+ E P + +++Q IRD + + Y E S +Y D+ + H QH
Sbjct: 20 RTESPPSSRSEYQMSIRDPIIRRNRYNTMEHSRSSHDPQYHQDQQQ--QQQPHHQQHSQH 77
Query: 202 VHIESHHE 209
+ SHH+
Sbjct: 78 LQ-HSHHK 84
>U55374-5|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated
protein 2, isoform c protein.
Length = 1926
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Query: 142 KVEDPHTGDNKFQHEIRDGDVVKGVYGLHEADGSVRTVEYSSDKHKGFSAIVKHSAPGQH 201
+ E P + +++Q IRD + + Y E S +Y D+ + H QH
Sbjct: 1660 RTESPPSSRSEYQMSIRDPIIRRNRYNTMEHSRSSHDPQYHQDQQQ--QQQPHHQQHSQH 1717
Query: 202 VHIESHHE 209
+ SHH+
Sbjct: 1718 LQ-HSHHK 1724
>U55374-4|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
protein 2, isoform b protein.
Length = 2027
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Query: 142 KVEDPHTGDNKFQHEIRDGDVVKGVYGLHEADGSVRTVEYSSDKHKGFSAIVKHSAPGQH 201
+ E P + +++Q IRD + + Y E S +Y D+ + H QH
Sbjct: 1761 RTESPPSSRSEYQMSIRDPIIRRNRYNTMEHSRSSHDPQYHQDQQQ--QQQPHHQQHSQH 1818
Query: 202 VHIESHHE 209
+ SHH+
Sbjct: 1819 LQ-HSHHK 1825
>U50071-8|AAV34806.1| 795|Caenorhabditis elegans Uncoordinated
protein 44, isoform d protein.
Length = 795
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 84 KPVYKPQVHYTRPQEGFSFHRGVHLEQAPVYQQTEGHAHESHDEPI 129
+P Y VH++ E + + +TE H H+S D P+
Sbjct: 626 EPSYSAPVHHSPVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPV 671
>U50071-7|AAV34805.1| 905|Caenorhabditis elegans Uncoordinated
protein 44, isoform b protein.
Length = 905
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 84 KPVYKPQVHYTRPQEGFSFHRGVHLEQAPVYQQTEGHAHESHDEPI 129
+P Y VH++ E + + +TE H H+S D P+
Sbjct: 736 EPSYSAPVHHSPVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPV 781
>U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated
protein 44, isoform a protein.
Length = 2039
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 84 KPVYKPQVHYTRPQEGFSFHRGVHLEQAPVYQQTEGHAHESHDEPI 129
+P Y VH++ E + + +TE H H+S D P+
Sbjct: 1640 EPSYSAPVHHSPVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPV 1685
>U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated
protein 44, isoform e protein.
Length = 1841
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 84 KPVYKPQVHYTRPQEGFSFHRGVHLEQAPVYQQTEGHAHESHDEPI 129
+P Y VH++ E + + +TE H H+S D P+
Sbjct: 1640 EPSYSAPVHHSPVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPV 1685
>U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated
protein 44, isoform c protein.
Length = 1867
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 84 KPVYKPQVHYTRPQEGFSFHRGVHLEQAPVYQQTEGHAHESHDEPI 129
+P Y VH++ E + + +TE H H+S D P+
Sbjct: 1640 EPSYSAPVHHSPVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPV 1685
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 84 KPVYKPQVHYTRPQEGFSFHRGVHLEQAPVYQQTEGHAHESHDEPI 129
+P Y VH++ E + + +TE H H+S D P+
Sbjct: 1646 EPSYSAPVHHSPVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPV 1691
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 27.1 bits (57), Expect = 9.9
Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 12/72 (16%)
Query: 69 PVHYPAPVQHEAPAAKPVYKPQVHYTRPQEGFSFHRG------VHLEQAPVY-QQTEGHA 121
P HYP P H P + + ++ P+ + H +Q P Y QQ + H+
Sbjct: 138 PPHYPPPPPHYPPPPPAPHSAYIDHSAPRPAYIEHSAPPPQPQYPQQQPPQYPQQRQQHS 197
Query: 122 HES-----HDEP 128
+ + H+EP
Sbjct: 198 YNAGPRTYHEEP 209
>U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin
protein.
Length = 1815
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 84 KPVYKPQVHYTRPQEGFSFHRGVHLEQAPVYQQTEGHAHESHDEPI 129
+P Y VH++ E + + +TE H H+S D P+
Sbjct: 1646 EPSYSAPVHHSPVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPV 1691
>U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin
protein.
Length = 1867
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 84 KPVYKPQVHYTRPQEGFSFHRGVHLEQAPVYQQTEGHAHESHDEPI 129
+P Y VH++ E + + +TE H H+S D P+
Sbjct: 1640 EPSYSAPVHHSPVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPV 1685
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 84 KPVYKPQVHYTRPQEGFSFHRGVHLEQAPVYQQTEGHAHESHDEPI 129
+P Y VH++ E + + +TE H H+S D P+
Sbjct: 1646 EPSYSAPVHHSPVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPV 1691
>U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein.
Length = 1786
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 84 KPVYKPQVHYTRPQEGFSFHRGVHLEQAPVYQQTEGHAHESHDEPI 129
+P Y VH++ E + + +TE H H+S D P+
Sbjct: 1646 EPSYSAPVHHSPVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPV 1691
>U21732-1|AAA85853.1| 970|Caenorhabditis elegans UNC-44 protein.
Length = 970
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 84 KPVYKPQVHYTRPQEGFSFHRGVHLEQAPVYQQTEGHAHESHDEPI 129
+P Y VH++ E + + +TE H H+S D P+
Sbjct: 743 EPSYSAPVHHSPVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPV 788
>U21731-1|AAA85852.1| 985|Caenorhabditis elegans UNC-44 protein.
Length = 985
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 84 KPVYKPQVHYTRPQEGFSFHRGVHLEQAPVYQQTEGHAHESHDEPI 129
+P Y VH++ E + + +TE H H+S D P+
Sbjct: 816 EPSYSAPVHHSPVPEEPEMEEEAPVAEMRTVVRTERHVHDSEDGPV 861
>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
activated calciumchannel alpha-1 subunit protein.
Length = 2027
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Query: 142 KVEDPHTGDNKFQHEIRDGDVVKGVYGLHEADGSVRTVEYSSDKHKGFSAIVKHSAPGQH 201
+ E P + +++Q IRD + + Y E S +Y D+ + H QH
Sbjct: 1761 RTESPPSSRSEYQMSIRDPIIRRNRYNTMEHSRSSHDPQYHQDQQQ--QQQPHHQQHSQH 1818
Query: 202 VHIESHHE 209
+ SHH+
Sbjct: 1819 LQ-HSHHK 1825
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.314 0.131 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,652,005
Number of Sequences: 27539
Number of extensions: 249072
Number of successful extensions: 548
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 500
Number of HSP's gapped (non-prelim): 64
length of query: 210
length of database: 12,573,161
effective HSP length: 78
effective length of query: 132
effective length of database: 10,425,119
effective search space: 1376115708
effective search space used: 1376115708
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 57 (27.1 bits)
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