Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000436-TA|BGIBMGA000436-PA|IPR000618|Insect cuticle
protein
(124 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44298| Best HMM Match : Herpes_US9 (HMM E-Value=8.9) 35 0.017
SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2) 33 0.051
SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08) 33 0.068
SB_50530| Best HMM Match : Pencillinase_R (HMM E-Value=3.3) 33 0.068
SB_54180| Best HMM Match : Mfp-3 (HMM E-Value=1.9) 32 0.12
SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.16
SB_52135| Best HMM Match : RCSD (HMM E-Value=4.8) 31 0.21
SB_47874| Best HMM Match : Keratin_B2 (HMM E-Value=4.9) 31 0.27
SB_44749| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.27
SB_23120| Best HMM Match : Mucin (HMM E-Value=0.033) 30 0.63
SB_44681| Best HMM Match : DUF1109 (HMM E-Value=0.85) 30 0.63
SB_39988| Best HMM Match : NAD_kinase (HMM E-Value=1.8) 29 0.84
SB_36131| Best HMM Match : His_leader (HMM E-Value=2.7e-10) 29 1.1
SB_11521| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.1
SB_9084| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.5
SB_5942| Best HMM Match : Sec7 (HMM E-Value=3.1e-09) 28 1.9
SB_53370| Best HMM Match : GnRH (HMM E-Value=7.1) 28 1.9
SB_38258| Best HMM Match : Sec7 (HMM E-Value=5.1e-22) 28 2.6
SB_34999| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.6
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 28 2.6
SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45) 28 2.6
SB_56821| Best HMM Match : His_leader (HMM E-Value=0.41) 27 3.4
SB_45852| Best HMM Match : I-set (HMM E-Value=0) 27 3.4
SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29) 27 3.4
SB_14700| Best HMM Match : MbeB_N (HMM E-Value=1.8) 27 3.4
SB_44132| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.5
SB_40736| Best HMM Match : DAP10 (HMM E-Value=1.2) 26 7.8
SB_19608| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.8
SB_31213| Best HMM Match : SNF2_N (HMM E-Value=0) 26 7.8
SB_5797| Best HMM Match : PH (HMM E-Value=3.7e-37) 26 7.8
SB_2648| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.8
>SB_44298| Best HMM Match : Herpes_US9 (HMM E-Value=8.9)
Length = 138
Score = 35.1 bits (77), Expect = 0.017
Identities = 15/65 (23%), Positives = 27/65 (41%)
Query: 60 VSDPHTGDHKSQHESRDGDVVKGYYSLHQPDGSIRHVDYHGDHHSGFHADVKYSTHHIVP 119
+ + + G++ ++H Y+ L P H +H +H H + HH
Sbjct: 12 IDNSNIGNNVTRHSDMHLRFYGCYHKLKNPRHRYHHHHHHQHNHHQHHHHHNHHHHHQQH 71
Query: 120 HHHHY 124
HHHH+
Sbjct: 72 HHHHH 76
>SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2)
Length = 694
Score = 33.5 bits (73), Expect = 0.051
Identities = 13/46 (28%), Positives = 19/46 (41%)
Query: 79 VVKGYYSLHQPDGSIRHVDYHGDHHSGFHADVKYSTHHIVPHHHHY 124
+ + ++ HQ H H HH H + HH HHHH+
Sbjct: 206 IYRRHHQHHQHHHHHHHQHNHHHHHHNHHHHHHHHYHHYHHHHHHH 251
Score = 26.2 bits (55), Expect = 7.8
Identities = 12/36 (33%), Positives = 14/36 (38%)
Query: 89 PDGSIRHVDYHGDHHSGFHADVKYSTHHIVPHHHHY 124
P SI H HH H HH H+HH+
Sbjct: 200 PSPSIVIYRRHHQHHQHHHHHHHQHNHHHHHHNHHH 235
>SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08)
Length = 839
Score = 33.1 bits (72), Expect = 0.068
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 95 HVDYHGDHHSGFHADVKYSTHHIVPHHHHY 124
H +H HH H + HH PHHHH+
Sbjct: 567 HPHHHHLHHHRHHHRHHHYHHHHYPHHHHH 596
Score = 26.6 bits (56), Expect = 5.9
Identities = 11/29 (37%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Query: 96 VDYHGDHHSGFHADVKYSTHHIVPHHHHY 124
+ H HH H + HH HHHHY
Sbjct: 564 ISTHPHHHHLHHHRHHHRHHHY--HHHHY 590
>SB_50530| Best HMM Match : Pencillinase_R (HMM E-Value=3.3)
Length = 356
Score = 33.1 bits (72), Expect = 0.068
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 95 HVDYHGDHHSGFHADVKYSTHHIVPHHHHY 124
H DYH +H +H D Y H+ +H+HY
Sbjct: 319 HYDYH--YHYDYHYDYHYDYHYHYDYHYHY 346
Score = 30.7 bits (66), Expect = 0.36
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 83 YYSLHQPDGSIRHVDYHGDHHSGFHADVKYSTHHIVPHHH 122
YY H H DYH D+H +H Y H+ +++
Sbjct: 313 YYDYHYHYDYHYHYDYHYDYHYDYHYHYDYHYHYDYQYYY 352
Score = 27.5 bits (58), Expect = 3.4
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Query: 76 DGDVVKGYYSLHQPDGSIR----HVDYHGDHHSGFHADVKYSTHHIVPHHHHY 124
D DVV+G+ L + YH D++ +H Y H+ +H+HY
Sbjct: 274 DEDVVRGFDGLRSLVTLVALYPYDYYYHYDYYYHYHYYYYYDYHYHYDYHYHY 326
Score = 26.6 bits (56), Expect = 5.9
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 4/27 (14%)
Query: 98 YHGDHHSGFHADVKYSTHHIVPHHHHY 124
YH D+H +H D Y H+ +H+HY
Sbjct: 318 YHYDYH--YHYDYHYDYHY--DYHYHY 340
>SB_54180| Best HMM Match : Mfp-3 (HMM E-Value=1.9)
Length = 125
Score = 32.3 bits (70), Expect = 0.12
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Query: 82 GYYSLHQPDGSIRHVDYHG-DHHSGFHADVKYSTHHIVPH 120
GY+ H D I H DY G DH+ G H D HH H
Sbjct: 69 GYHGYHDHDVHIHHHDYGGHDHYDGGHHD---GMHHDYGH 105
>SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 736
Score = 31.9 bits (69), Expect = 0.16
Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Query: 60 VSDPHTGDHKSQHESRDGDVVKGYYSLHQPDGSIRHVDYHGDHHSGFHADVKYSTHHIVP 119
+ + + G++ ++H Y+ L P H +H H H + HH
Sbjct: 224 IDNSNIGNNVTRHSDMHLRFYGCYHKLKNPRHRYHH-HHHHHHQHNHHQHHHHHHHHHHN 282
Query: 120 HHHHY 124
HHHH+
Sbjct: 283 HHHHH 287
Score = 29.9 bits (64), Expect = 0.63
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 97 DYHGDHHSGFHADVKYSTHHIVPHHHHY 124
++H HH H + HH HHHH+
Sbjct: 268 NHHQHHHHHHHHHHNHHHHHQQHHHHHH 295
Score = 29.1 bits (62), Expect = 1.1
Identities = 12/41 (29%), Positives = 15/41 (36%)
Query: 83 YYSLHQPDGSIRHVDYHGDHHSGFHADVKYSTHHIVPHHHH 123
Y+ H H +H HH H + H HHHH
Sbjct: 257 YHHHHHHHHQHNHHQHHHHHHHHHHNHHHHHQQHHHHHHHH 297
Score = 28.7 bits (61), Expect = 1.5
Identities = 11/30 (36%), Positives = 12/30 (40%)
Query: 95 HVDYHGDHHSGFHADVKYSTHHIVPHHHHY 124
H H HH H HH HHHH+
Sbjct: 265 HQHNHHQHHHHHHHHHHNHHHHHQQHHHHH 294
Score = 27.9 bits (59), Expect = 2.6
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 6/38 (15%)
Query: 87 HQPDGSIRHVDYHGDHHSGFHADVKYSTHHIVPHHHHY 124
HQ + H +H HH+ H + HH HHHH+
Sbjct: 265 HQHNHHQHHHHHHHHHHNHHH---HHQQHH---HHHHH 296
>SB_52135| Best HMM Match : RCSD (HMM E-Value=4.8)
Length = 476
Score = 31.5 bits (68), Expect = 0.21
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 59 KVSDPHTGDHKSQHESRDGDVVKGYYSLHQPDGSIRHVDYHGDHHSGFHADVKYSTHHIV 118
K SD H DH S H + D V G+ Q G HV H DH +G V ++H+
Sbjct: 335 KHSD-HVTDH-SDHVTGHSDHVTGHSD--QVTGHSDHVTDHNDHVTGRSDHVTGHSYHVT 390
Query: 119 PHHHH 123
H+ +
Sbjct: 391 GHNDY 395
>SB_47874| Best HMM Match : Keratin_B2 (HMM E-Value=4.9)
Length = 253
Score = 31.1 bits (67), Expect = 0.27
Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Query: 61 SDPHTGDHKSQHESRDGDV-VKGYYSLHQPDGSIRHVDYHGDHHSGFHADVKYSTH---H 116
+D H H H + D V+ + H + HV H DHH H D +H H
Sbjct: 182 TDHHVQSHTDHHVLSNTDHNVQSHTDHHVLSNTDHHVQSHTDHHVQSHTDQHVQSHTDQH 241
Query: 117 IVPH 120
+ H
Sbjct: 242 VQSH 245
>SB_44749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2250
Score = 31.1 bits (67), Expect = 0.27
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 55 DFEYKVSDPHTGDHKSQHESRDGDVVKGY--YSLHQPDGSIRHVDYHGD 101
D + + GD +H+ DGD V + Y+ D +RH DY GD
Sbjct: 1863 DVRHDEYNDEDGDSDVRHDDYDGDSVVRHDDYNDDNGDSDVRHDDYDGD 1911
Score = 26.6 bits (56), Expect = 5.9
Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 5/52 (9%)
Query: 55 DFEYKVSDPHTGDHKSQHESR-----DGDVVKGYYSLHQPDGSIRHVDYHGD 101
D + ++ GD +H+ D DV Y+ D +RH DY GD
Sbjct: 1835 DVRHDDNNDDDGDSDVRHDDNNDDDGDSDVRHDEYNDEDGDSDVRHDDYDGD 1886
>SB_23120| Best HMM Match : Mucin (HMM E-Value=0.033)
Length = 382
Score = 29.9 bits (64), Expect = 0.63
Identities = 18/54 (33%), Positives = 21/54 (38%)
Query: 71 QHESRDGDVVKGYYSLHQPDGSIRHVDYHGDHHSGFHADVKYSTHHIVPHHHHY 124
Q R KG L Q +G + + HS H Y HH HHHHY
Sbjct: 90 QKSQRPEKEKKGLGFLWQKNGVLLSLPPPQFRHSHDHDRHHYHRHHNNIHHHHY 143
>SB_44681| Best HMM Match : DUF1109 (HMM E-Value=0.85)
Length = 377
Score = 29.9 bits (64), Expect = 0.63
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Query: 95 HVDYHG-DHHSG--FHADVKYSTHHIVPHHHHY 124
H DYH DHH H D + HH HH HY
Sbjct: 87 HDDYHYYDHHYDDYHHDDYHHDYHHHDYHHDHY 119
Score = 28.7 bits (61), Expect = 1.5
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Query: 83 YYSLHQPDGSIRHVDYHGD-HHSGFHADVKYSTHHIVPHHH 122
YY H D H DYH D HH +H D + H+H
Sbjct: 92 YYDHHYDD--YHHDDYHHDYHHHDYHHDHYEEPEYRSLHYH 130
>SB_39988| Best HMM Match : NAD_kinase (HMM E-Value=1.8)
Length = 581
Score = 29.5 bits (63), Expect = 0.84
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Query: 93 IRHVDYHGDHHSGFHADVKYSTHHIV--PHHHHY 124
++H D+H HH H D ++ HH+ HHHHY
Sbjct: 226 VKH-DHHHYHHHLCH-DRRHHYHHVHYDHHHHHY 257
>SB_36131| Best HMM Match : His_leader (HMM E-Value=2.7e-10)
Length = 416
Score = 29.1 bits (62), Expect = 1.1
Identities = 14/56 (25%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Query: 68 HKSQHESRDGDVVKGYYSLHQPDGSIRHVDYHGDHHSGFHADVKYSTHHIVPHHHH 123
H H S ++ + H P S + H HH + + I+ HHHH
Sbjct: 264 HHHHHPSSSSSIIIIIHHHHHPSSSSSIIIIHHHHHPSSSSSIIIII--IIHHHHH 317
>SB_11521| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 953
Score = 29.1 bits (62), Expect = 1.1
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Query: 80 VKGYYSLHQPDGSIRHVDYHGDHH---SGFHADVKYSTHHIVPHHHHY 124
V GY + H P + HV + HH + H Y+THH+ + H+
Sbjct: 783 VPGYTTHHVPGNTTHHVPGNTTHHVPGNTTHHVSGYTTHHVPGNTTHH 830
Score = 28.3 bits (60), Expect = 1.9
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Query: 82 GYYSLHQPDGSIRHVDYHGDHH---SGFHADVKYSTHHIVPHHHHY 124
GY + H P + HV + HH + H Y+THH+ + H+
Sbjct: 537 GYATRHVPGNTTHHVPGNTTHHVPGNTTHHVPGYTTHHVPGNTTHH 582
Score = 27.9 bits (59), Expect = 2.6
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Query: 80 VKGYYSLHQPDGSIRHVDYHGDHHSGFHADVKYSTHHIVPHHHHY 124
V GY + H P + HV + HH Y+THH+ + H+
Sbjct: 567 VPGYTTHHVPGNTTHHVPGYATHHV-----PGYTTHHVPGNTTHH 606
Score = 27.5 bits (58), Expect = 3.4
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 80 VKGYYSLHQPDGSIRHVDYHGDHH-SGF--HADVKYSTHHIVPHHHHY 124
V GY + H P ++ HV + HH G+ H Y+TH + + H+
Sbjct: 687 VPGYTTHHVPGYTVHHVPGNTTHHVPGYTAHHVPGYTTHQVPGYTTHH 734
Score = 27.1 bits (57), Expect = 4.5
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 80 VKGYYSLHQPDGSIRHVDYHGDHH-SGF--HADVKYSTHHIVPHHHHY 124
V GY + H P ++ HV + HH G+ H +THH+ + H+
Sbjct: 639 VPGYTTHHVPGYTVHHVPGNTTHHVPGYTVHHVPGNTTHHVPGYTAHH 686
Score = 26.6 bits (56), Expect = 5.9
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Query: 80 VKGYYSLHQPDGSIRHVDYHGDHH-SGF--HADVKYSTHHIVPHHHHY 124
V GY + H P + HV + HH G+ H +THH+ + H+
Sbjct: 591 VPGYTTHHVPGNTTHHVPGYTTHHVPGYTVHHVPGNTTHHVPGNTAHH 638
Score = 26.6 bits (56), Expect = 5.9
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Query: 80 VKGYYSLHQPDGSIRHVDYHGDHH---SGFHADVKYSTHHIVPHHHHY 124
V GY + H P + HV + HH + H Y+TH + + H+
Sbjct: 735 VPGYTTHHVPGNTTHHVPGNTTHHVPGNTTHQVSGYTTHQVPGYTTHH 782
>SB_9084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 28.7 bits (61), Expect = 1.5
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 89 PDGSIRHVDYHGD--HHSGFHADVKYSTHHIVPHHHH 123
P+ H +H D HH H D ++ H HHHH
Sbjct: 3 PNHHHHHDHHHHDHHHHDHQHHDHQHHDHQHHDHHHH 39
Score = 27.9 bits (59), Expect = 2.6
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Query: 95 HVDYHGD--HHSGFHADVKYSTHHIVPHHH 122
H +H D HH H D ++ HH HHH
Sbjct: 14 HDHHHHDHQHHDHQHHDHQHHDHHHHDHHH 43
>SB_5942| Best HMM Match : Sec7 (HMM E-Value=3.1e-09)
Length = 304
Score = 28.3 bits (60), Expect = 1.9
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 102 HHSGFHADVKYSTHHIVPHHHHY 124
HH +H + + HH HHHH+
Sbjct: 155 HHHYYHHHLLHHHHHHWHHHHHH 177
>SB_53370| Best HMM Match : GnRH (HMM E-Value=7.1)
Length = 244
Score = 28.3 bits (60), Expect = 1.9
Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 5/63 (7%)
Query: 66 GDHKSQH---ESRDGDVVKGYYSLHQPDGSIR--HVDYHGDHHSGFHADVKYSTHHIVPH 120
G H+ QH E G + + S + G+ R HV Y +H + V Y H
Sbjct: 48 GTHRQQHVTYEEEHGTHRQQHVSYEEEHGTHRQQHVTYEEEHGTHRQQHVTYEEEHGTHR 107
Query: 121 HHH 123
HH
Sbjct: 108 QHH 110
Score = 26.2 bits (55), Expect = 7.8
Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 5/63 (7%)
Query: 66 GDHKSQH---ESRDGDVVKGYYSLHQPDGSIR--HVDYHGDHHSGFHADVKYSTHHIVPH 120
G H+ QH E G + + + + G+ R HV Y +H + V Y H
Sbjct: 160 GTHRQQHVTYEEEHGTHRQHHVTYEEEHGTHRQQHVTYEEEHGTHRQHHVTYEEKHGTHR 219
Query: 121 HHH 123
HH
Sbjct: 220 QHH 222
>SB_38258| Best HMM Match : Sec7 (HMM E-Value=5.1e-22)
Length = 237
Score = 27.9 bits (59), Expect = 2.6
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 92 SIRHVDYHGDHHSGFHADVKYSTHHIVPHHHHY 124
+I H Y+ HH H + HH++ HHH+
Sbjct: 167 AIHHHHYY-HHHLLHHHHHHWHHHHLIIRHHHH 198
>SB_34999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 356
Score = 27.9 bits (59), Expect = 2.6
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 66 GDHKSQHESRDG--DVVKGYYSLHQPDGSIR 94
GDH+S HE + G D+ +G ++ +P+ IR
Sbjct: 106 GDHQSHHEEKRGLQDLAQGLHACARPEKLIR 136
>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
Length = 330
Score = 27.9 bits (59), Expect = 2.6
Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 9/66 (13%)
Query: 68 HKSQHESRD-GDVVKGYYSLHQPD---GSIRHVDYHG----DHHSGFHADVK-YSTHHIV 118
HKS H SR G G S + D GS R H HS H+ +ST+
Sbjct: 165 HKSHHSSRQHGHSKSGRTSSYSSDSSPGSGREKSSHSRSVHKSHSSKHSHPSSHSTNRSH 224
Query: 119 PHHHHY 124
HHHH+
Sbjct: 225 HHHHHH 230
>SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45)
Length = 453
Score = 27.9 bits (59), Expect = 2.6
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 95 HVDYHGDHHSGFHADVKYSTHHIVPHHHHY 124
H +H HH H ++ H HHHH+
Sbjct: 314 HHRHHHHHHHHHHQRHRHRHRHRHRHHHHH 343
Score = 26.6 bits (56), Expect = 5.9
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 94 RHVDYHGDHHSGFHADVKYSTHHIVPHHHHY 124
RH +H HH H ++ H HHHH+
Sbjct: 316 RHHHHHHHHHHQRHRH-RHRHRHRHHHHHHH 345
>SB_56821| Best HMM Match : His_leader (HMM E-Value=0.41)
Length = 131
Score = 27.5 bits (58), Expect = 3.4
Identities = 11/26 (42%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Query: 99 HGDHHSGFHADVKYSTHHIVPHHHHY 124
H HH H V + HH HHHH+
Sbjct: 51 HYHHHHRQHITVHHHYHHY--HHHHH 74
Score = 26.6 bits (56), Expect = 5.9
Identities = 12/32 (37%), Positives = 14/32 (43%)
Query: 92 SIRHVDYHGDHHSGFHADVKYSTHHIVPHHHH 123
SI + Y+ HH H S HH H HH
Sbjct: 2 SIITLHYYHRHHQHHHPPSSPSYHHHRHHQHH 33
>SB_45852| Best HMM Match : I-set (HMM E-Value=0)
Length = 1122
Score = 27.5 bits (58), Expect = 3.4
Identities = 10/29 (34%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
Query: 95 HVDYHGDHHSGFHADVKYSTHHIVPHHHH 123
H +H H +H ++ HH HHHH
Sbjct: 1031 HYHHHRRRHHHYHHQQQHQFHH---HHHH 1056
>SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29)
Length = 1779
Score = 27.5 bits (58), Expect = 3.4
Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 9/81 (11%)
Query: 53 KFDFEYKVSDPHTGDHKSQHESRDGDVVKGYYSLHQPDGSIRHVDY----HG-----DHH 103
K + K + TG H+ R D S++Q + +H + HG HH
Sbjct: 282 KHKYLLKHAKKSTGRHQKSVYQRKSDAKNRNISVNQIKTANKHETFGRQRHGLRQSKKHH 341
Query: 104 SGFHADVKYSTHHIVPHHHHY 124
H HH HHHH+
Sbjct: 342 RNKHYRHHDRNHHHRHHHHHH 362
>SB_14700| Best HMM Match : MbeB_N (HMM E-Value=1.8)
Length = 815
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 88 QPDGSIRHV-DYHGDHHSGFHADVKYSTHHIVPHHHHY 124
+P+ + H+ DY+ HH H HH + +HHY
Sbjct: 374 RPNRYLHHLHDYYLHHHHLHHNHKNDHKHHHLHDNHHY 411
>SB_44132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 64
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 92 SIRHVDYHGDHHSGFHADVKYSTHHIVPHHHH 123
SI + +HG HH + +Y HH +H H
Sbjct: 21 SIIIIKHHGYHHHHHYHQQQYRKHHNNHNHSH 52
>SB_40736| Best HMM Match : DAP10 (HMM E-Value=1.2)
Length = 306
Score = 26.2 bits (55), Expect = 7.8
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 65 TGDHKSQHESRDGDVVKGYYSLHQPDGSIRHVDYHGDHHSGFHADVKYSTHHIV 118
T D++S + +D Y +L PD S ++ G + + +K T H V
Sbjct: 138 TQDYESLEQPKDSTDHPVYNTLEDPDSSPQYCGLKGSTQNHVYKSLKPKTPHAV 191
>SB_19608| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 26.2 bits (55), Expect = 7.8
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 72 HESRDGDVVKGYYSLHQPDGSIRHVDYHGDHHSGFHADV 110
H S D DV SL PD I DY + ++ + DV
Sbjct: 239 HISEDADVASQVISLVSPDSMIEEGDYVLEAYTDSYDDV 277
>SB_31213| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 919
Score = 26.2 bits (55), Expect = 7.8
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 3/38 (7%)
Query: 87 HQPDGSIRHVDYHGDHHSGFHADVKYSTHHIVPHHHHY 124
H G +HG H G A ++ S H HHHH+
Sbjct: 405 HSTSGPFSPPRHHG--HGGLEA-IQTSKHQQDQHHHHH 439
>SB_5797| Best HMM Match : PH (HMM E-Value=3.7e-37)
Length = 1481
Score = 26.2 bits (55), Expect = 7.8
Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 65 TGDHKSQHESRDGDVVKGYYSLHQPDGSIRHVDYHGD 101
+ H S H+ D D + G+ + Q + R +DY G+
Sbjct: 123 SSSHMSAHKM-DDDYLSGFAADEQEESDARELDYEGE 158
>SB_2648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 26.2 bits (55), Expect = 7.8
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 72 HESRDGDVVKGYYSLHQPDGSIRHVDYHGDHHSGFHADV 110
H S D DV SL PD I DY + ++ + DV
Sbjct: 112 HISEDADVASQVISLVSPDSMIEEGDYVLEAYTDSYDDV 150
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.321 0.137 0.450
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,891,805
Number of Sequences: 59808
Number of extensions: 148698
Number of successful extensions: 620
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 438
Number of HSP's gapped (non-prelim): 115
length of query: 124
length of database: 16,821,457
effective HSP length: 74
effective length of query: 50
effective length of database: 12,395,665
effective search space: 619783250
effective search space used: 619783250
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 55 (26.2 bits)
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