Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000435-TA|BGIBMGA000435-PA|IPR000618|Insect cuticle
protein
(109 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485... 27 3.2
11_03_0010 - 8922361-8922375,8923888-8924610 26 5.6
11_05_0016 - 18410889-18411104,18411326-18411381,18412883-184130... 26 7.4
08_02_1446 + 27156449-27156790,27157961-27158042,27158698-271587... 26 7.4
06_01_0289 - 2111768-2114377,2114970-2115025,2115272-2115323 26 7.4
05_03_0263 + 11234850-11235044,11235413-11237341 26 7.4
03_03_0191 + 15302384-15302422,15302780-15303246,15303356-153035... 26 7.4
10_06_0143 - 11183574-11183761,11183989-11184344,11184437-111845... 25 9.8
06_01_0838 - 6360232-6360460,6360571-6360719,6360825-6360933,636... 25 9.8
03_02_0065 + 5358388-5358397,5358492-5358562,5359132-5359219,535... 25 9.8
>05_03_0235 -
10747649-10748118,10748226-10748314,10748477-10748574,
10748934-10749046,10749107-10749200,10749557-10749589,
10749734-10749851,10750110-10750210,10751036-10751233,
10751337-10751471,10751752-10751830,10753650-10753738,
10753835-10753987,10754100-10754285
Length = 651
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/23 (47%), Positives = 12/23 (52%)
Query: 77 KGYYSLHQPDGSIRHVDYHGDHH 99
KG + H D RH HGDHH
Sbjct: 532 KGRHHRHHHDHRHRHGHSHGDHH 554
>11_03_0010 - 8922361-8922375,8923888-8924610
Length = 245
Score = 26.2 bits (55), Expect = 5.6
Identities = 13/23 (56%), Positives = 14/23 (60%)
Query: 71 RDGDVVKGYYSLHQPDGSIRHVD 93
RDG V YS P GSIR+VD
Sbjct: 195 RDGSDVPAAYSTGCPAGSIRNVD 217
>11_05_0016 -
18410889-18411104,18411326-18411381,18412883-18413009,
18413113-18413307
Length = 197
Score = 25.8 bits (54), Expect = 7.4
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 87 GSIRHVDYHGDHHSGLVTNIV 107
G I +V Y G+HH LV ++V
Sbjct: 19 GEIAYVSYGGEHHLPLVMSLV 39
>08_02_1446 +
27156449-27156790,27157961-27158042,27158698-27158792,
27159421-27159492,27159572-27159651,27159728-27159827,
27160064-27160141,27160408-27160455,27160570-27160638,
27161035-27161175,27161262-27161516
Length = 453
Score = 25.8 bits (54), Expect = 7.4
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 58 DPHTGDHKSQHESRDGDVVKGYYSLHQPD 86
DP T DH +E+ D + + HQ D
Sbjct: 343 DPETTDHPQDYETEDASQISEAHLDHQAD 371
>06_01_0289 - 2111768-2114377,2114970-2115025,2115272-2115323
Length = 905
Score = 25.8 bits (54), Expect = 7.4
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 88 SIRHVDYHGDHHSGLVTNIVRS 109
++RH+D G+H SG +T + +
Sbjct: 319 NLRHIDLSGNHFSGDITRLANT 340
>05_03_0263 + 11234850-11235044,11235413-11237341
Length = 707
Score = 25.8 bits (54), Expect = 7.4
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Query: 56 VSDPHTGDHK---SQHESRDGDVVKGYYSLHQPDGSIRHVDYHGDHH 99
+SD HT S H+ R +V ++ LHQ DG H++ GD +
Sbjct: 460 ISDLHTIHEDVVTSAHQKRAALIVLPFHKLHQMDG---HMESLGDEY 503
>03_03_0191 +
15302384-15302422,15302780-15303246,15303356-15303563,
15303723-15303794,15304295-15304430,15304619-15304890,
15305197-15305345,15305818-15305947,15306244-15306258
Length = 495
Score = 25.8 bits (54), Expect = 7.4
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 52 FEYKVSDPHTGDHKSQHESRDGDV-VKGYYSLHQPDGSIR-HVDYHG 96
FE K+ D + S+HE+ G V + S H+ D + HVD G
Sbjct: 17 FEGKLKDGFARSNNSEHENGAGTVSISSKKSKHRVDSEKKPHVDISG 63
>10_06_0143 -
11183574-11183761,11183989-11184344,11184437-11184592,
11184825-11184994,11185906-11186064,11186856-11187164,
11187281-11187576,11187825-11188174,11188279-11188434,
11188634-11188803,11189289-11189447,11190702-11191010,
11191172-11191458,11191911-11192263,11192366-11192521,
11192680-11192849,11195800-11195958,11196937-11197254,
11197658-11197786
Length = 1449
Score = 25.4 bits (53), Expect = 9.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 64 HKSQHESRDGDVVKGYYSLHQPDGSIRHVDYHG 96
H H S + + GY SL+QP IR V+ G
Sbjct: 470 HVQNHWSLEWMIKNGYISLNQPKLPIRAVNLGG 502
>06_01_0838 -
6360232-6360460,6360571-6360719,6360825-6360933,
6361446-6362276,6362865-6362969,6363084-6363180,
6363303-6363341,6363435-6363477
Length = 533
Score = 25.4 bits (53), Expect = 9.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 73 GDVVKGYYSLHQPDGSIRHVDYHGD 97
G ++KGYYSL+ G R + GD
Sbjct: 507 GKIMKGYYSLNARIGGDRSQCHQGD 531
>03_02_0065 +
5358388-5358397,5358492-5358562,5359132-5359219,
5359730-5359815,5360211-5360265,5360357-5360544
Length = 165
Score = 25.4 bits (53), Expect = 9.8
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 51 DFEYKVSDPHTGDHKSQHESRDGDVV 76
D + +P DH S HE RDG +
Sbjct: 88 DTNAEAGEPERKDHLSGHEMRDGSTM 113
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.415
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,676,021
Number of Sequences: 37544
Number of extensions: 90269
Number of successful extensions: 149
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 141
Number of HSP's gapped (non-prelim): 10
length of query: 109
length of database: 14,793,348
effective HSP length: 72
effective length of query: 37
effective length of database: 12,090,180
effective search space: 447336660
effective search space used: 447336660
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 53 (25.4 bits)
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