Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000434-TA|BGIBMGA000434-PA|IPR000618|Insect cuticle
protein
         (114 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   0.57 
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       23   0.75 
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   3.0  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    20   5.3  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    20   7.0  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    20   7.0  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.4 bits (48), Expect = 0.57
 Identities = 8/21 (38%), Positives = 15/21 (71%)

Query: 84  QPDGSIRHVDYHGDHHSGLVS 104
           Q DG++RH+D + D  +G ++
Sbjct: 64  QADGNVRHLDEYLDVDAGTIA 84


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 23.0 bits (47), Expect = 0.75
 Identities = 13/44 (29%), Positives = 20/44 (45%)

Query: 54  YKVSDPHTGDHKSQHESRDGDDVKGYYSLHQPDGSIRHVDYHGD 97
           Y V   +   ++ +  + DG  V  Y  +   DGS+R V Y  D
Sbjct: 195 YVVEGRNYRKYRVEERTSDGFIVGEYGVVSHDDGSLRGVRYTAD 238


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)

Query: 84  QPDGSIRHVDY 94
           QPD +I H DY
Sbjct: 137 QPDNAIEHSDY 147


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 20.2 bits (40), Expect = 5.3
 Identities = 7/11 (63%), Positives = 8/11 (72%)

Query: 65  KSQHESRDGDD 75
           K +HES D DD
Sbjct: 281 KEEHESMDDDD 291


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 19.8 bits (39), Expect = 7.0
 Identities = 8/28 (28%), Positives = 14/28 (50%)

Query: 73  GDDVKGYYSLHQPDGSIRHVDYHGDHHS 100
           G+D+  Y       GS+ H+  +  HH+
Sbjct: 69  GEDIVTYSGHKLKAGSMVHLHIYDMHHN 96


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 19.8 bits (39), Expect = 7.0
 Identities = 10/35 (28%), Positives = 15/35 (42%)

Query: 72  DGDDVKGYYSLHQPDGSIRHVDYHGDHHSGLVSCN 106
           D  D++   SLH P   +   +Y  D  S +   N
Sbjct: 88  DRMDIRDRRSLHGPQQQMDGQEYRPDSPSSMHMAN 122


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.135    0.420 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,346
Number of Sequences: 317
Number of extensions: 949
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 114
length of database: 114,650
effective HSP length: 49
effective length of query: 65
effective length of database: 99,117
effective search space:  6442605
effective search space used:  6442605
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.4 bits)
S2: 38 (19.4 bits)