GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000434-TA|BGIBMGA000434-PA|IPR000618|Insect cuticle
protein
         (114 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC094696-1|AAH94696.1|  356|Homo sapiens zinc finger, CW type wi...    29   2.5  
BC036522-1|AAH36522.1|  780|Homo sapiens cation channel, sperm a...    28   7.7  
BC032950-1|AAH32950.1|  780|Homo sapiens cation channel, sperm a...    28   7.7  
AF407333-1|AAL14105.1|  780|Homo sapiens sperm ion channel protein.    28   7.7  

>BC094696-1|AAH94696.1|  356|Homo sapiens zinc finger, CW type with
           PWWP domain 2 protein.
          Length = 356

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)

Query: 74  DDVKGYYSLHQPDGSIR--HVDYHGDHHS 100
           D  KG Y  + PDG++   H+++ GD HS
Sbjct: 119 DRFKGKYVTYDPDGNVEEYHIEFLGDPHS 147


>BC036522-1|AAH36522.1|  780|Homo sapiens cation channel, sperm
           associated 1 protein.
          Length = 780

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 3/57 (5%)

Query: 57  SDPHTGDH---KSQHESRDGDDVKGYYSLHQPDGSIRHVDYHGDHHSGLVSCNFNSS 110
           S+ H GDH   +  H          Y+  H+     +H D+HG +HS  +  ++  S
Sbjct: 265 SEYHQGDHHPSEYHHGDHPHHTQHHYHQTHRHRDYHQHQDHHGAYHSSYLHGDYVQS 321


>BC032950-1|AAH32950.1|  780|Homo sapiens cation channel, sperm
           associated 1 protein.
          Length = 780

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 3/57 (5%)

Query: 57  SDPHTGDH---KSQHESRDGDDVKGYYSLHQPDGSIRHVDYHGDHHSGLVSCNFNSS 110
           S+ H GDH   +  H          Y+  H+     +H D+HG +HS  +  ++  S
Sbjct: 265 SEYHQGDHHPSEYHHGDHPHHTQHHYHQTHRHRDYHQHQDHHGAYHSSYLHGDYVQS 321


>AF407333-1|AAL14105.1|  780|Homo sapiens sperm ion channel protein.
          Length = 780

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 3/57 (5%)

Query: 57  SDPHTGDH---KSQHESRDGDDVKGYYSLHQPDGSIRHVDYHGDHHSGLVSCNFNSS 110
           S+ H GDH   +  H          Y+  H+     +H D+HG +HS  +  ++  S
Sbjct: 265 SEYHQGDHHPSEYHHGDHPHHTQHHYHQTHRHRDYHQHQDHHGAYHSSYLHGDYVQS 321


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.319    0.135    0.420 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,964,390
Number of Sequences: 224733
Number of extensions: 499240
Number of successful extensions: 894
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 894
Number of HSP's gapped (non-prelim): 4
length of query: 114
length of database: 73,234,838
effective HSP length: 80
effective length of query: 34
effective length of database: 55,256,198
effective search space: 1878710732
effective search space used: 1878710732
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)