Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000434-TA|BGIBMGA000434-PA|IPR000618|Insect cuticle
protein
(114 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g67870.1 68414.m07750 glycine-rich protein contains non-conse... 33 0.035
At1g69690.1 68414.m08020 TCP family transcription factor, putati... 30 0.43
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 29 0.99
At1g78070.1 68414.m09097 WD-40 repeat family protein contains Pf... 29 0.99
At2g40110.1 68415.m04931 yippee family protein similar to mdgl-1... 27 2.3
At1g51680.2 68414.m05823 4-coumarate--CoA ligase 1 / 4-coumaroyl... 27 3.0
At1g51680.1 68414.m05822 4-coumarate--CoA ligase 1 / 4-coumaroyl... 27 3.0
At2g39580.1 68415.m04855 expressed protein 26 7.0
At2g04620.1 68415.m00470 cation efflux family protein potential ... 26 7.0
At3g60750.1 68416.m06796 transketolase, putative strong similari... 25 9.2
>At1g67870.1 68414.m07750 glycine-rich protein contains
non-consensus GG donor splice site at exon2; modeled to
est match.
Length = 279
Score = 33.5 bits (73), Expect = 0.035
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 60 HTGDHKSQHESRDGDDVKGYYSL-HQPDGSIRHVDYHGDHHSG 101
H G H QH+ G +G + + HQ ++H D HG H G
Sbjct: 170 HQGGHGMQHQGMHGMQHQGGHGMEHQGGHGMQHQDMHGMQHQG 212
Score = 31.1 bits (67), Expect = 0.19
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 60 HTGDHKSQHESRDGDDVKGYYSL-HQPDGSIRHVDYHGDHHSG 101
H G H QH+ G +G + + HQ ++H HG H G
Sbjct: 194 HQGGHGMQHQDMHGMQHQGRHGMQHQGGHEMQHQGMHGMQHQG 236
Score = 30.7 bits (66), Expect = 0.24
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 60 HTGDHKSQHESRDGDDVKGYYSL-HQPDGSIRHVDYHGDHHSG 101
H G H QH+ G +G + + HQ ++H HG H G
Sbjct: 146 HQGGHGMQHQGMHGMQHQGGHGMQHQGGHGMQHQGMHGMQHQG 188
Score = 29.1 bits (62), Expect = 0.75
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 60 HTGDHKSQHESRDGDDVKGYYSL-HQPDGSIRHVDYHGDHHSGLVSCN 106
H G H QH+ +G + + HQ I+H HG H G V N
Sbjct: 210 HQGRHGMQHQGGHEMQHQGMHGMQHQGGHRIQHQGMHGMQHPGGVVVN 257
Score = 27.9 bits (59), Expect = 1.7
Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 60 HTGDHKSQHESRDGDDVKGYYSL-HQPDGSIRHVDYHGDHHSGL 102
H G H QH+ G +G + + HQ + H HG H +
Sbjct: 162 HQGGHGMQHQGGHGMQHQGMHGMQHQGGHGMEHQGGHGMQHQDM 205
>At1g69690.1 68414.m08020 TCP family transcription factor, putative
similar to PCF1 (GI:2580438) and PCF2 [(GI:2580440)
Oryza sativa]
Length = 325
Score = 29.9 bits (64), Expect = 0.43
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 4/31 (12%)
Query: 61 TGDHKSQHESRDGDDVKGYYSLHQPDGSIRH 91
TG+H + ++RDGD ++ HQ DGS H
Sbjct: 297 TGNHNNNQQNRDGD----HHHNHQEDGSTSH 323
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 28.7 bits (61), Expect = 0.99
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 51 DFEYKVSDPHTGDHKSQHESRDGDDVKG 78
DF++++S+ T + S E+R+G D++G
Sbjct: 43 DFDFELSESKTNNETSALEARNGKDIQG 70
>At1g78070.1 68414.m09097 WD-40 repeat family protein contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 229
Score = 28.7 bits (61), Expect = 0.99
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 51 DFEYKVSDPHTGDHKSQHESRDGDDVKG 78
DF++++S+ T + S E+R+G D++G
Sbjct: 43 DFDFELSESKTNNETSALEARNGKDIQG 70
>At2g40110.1 68415.m04931 yippee family protein similar to mdgl-1
[Mus musculus] GI:10441648, Yippee protein [Drosophila
melanogaster] GI:5713279; contains Pfam profile PF03226:
Yippee putative zinc-binding protein
Length = 130
Score = 27.5 bits (58), Expect = 2.3
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 64 HKSQHESRDGDDVKGYYSLHQPDGSIRHVDYHGDHHSG 101
H+ + ++G V + + PDGS V HG H G
Sbjct: 87 HEKNQKYKEGKSVLERFKISGPDGSNYWVSSHGRHIGG 124
>At1g51680.2 68414.m05823 4-coumarate--CoA ligase 1 /
4-coumaroyl-CoA synthase 1 (4CL1) identical to SP|Q42524
4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1)
(4-coumaroyl-CoA synthase 1) {Arabidopsis thaliana}
Length = 490
Score = 27.1 bits (57), Expect = 3.0
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 7/54 (12%)
Query: 53 EYKVSDPHTGDHKSQHES-----RDGDDVKGYYSLHQPDGSIRHVDYHGDHHSG 101
E K+ DP TGD S+++ R +KGY L+ P + +D G H+G
Sbjct: 389 EMKIVDPDTGDSLSRNQPGEICIRGHQIMKGY--LNNPAATAETIDKDGWLHTG 440
>At1g51680.1 68414.m05822 4-coumarate--CoA ligase 1 /
4-coumaroyl-CoA synthase 1 (4CL1) identical to SP|Q42524
4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1)
(4-coumaroyl-CoA synthase 1) {Arabidopsis thaliana}
Length = 561
Score = 27.1 bits (57), Expect = 3.0
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 7/54 (12%)
Query: 53 EYKVSDPHTGDHKSQHES-----RDGDDVKGYYSLHQPDGSIRHVDYHGDHHSG 101
E K+ DP TGD S+++ R +KGY L+ P + +D G H+G
Sbjct: 389 EMKIVDPDTGDSLSRNQPGEICIRGHQIMKGY--LNNPAATAETIDKDGWLHTG 440
>At2g39580.1 68415.m04855 expressed protein
Length = 1567
Score = 25.8 bits (54), Expect = 7.0
Identities = 13/47 (27%), Positives = 20/47 (42%)
Query: 54 YKVSDPHTGDHKSQHESRDGDDVKGYYSLHQPDGSIRHVDYHGDHHS 100
Y++ D S +D D + SLH PDG + + H+S
Sbjct: 811 YELRGRCNNDECSWQHFKDFSDDSLHQSLHDPDGRVGSSSHQKTHNS 857
>At2g04620.1 68415.m00470 cation efflux family protein potential
member of the cation diffusion facilitator (CDF) family,
or cation efflux (CE) family, see PMID:11500563
Length = 798
Score = 25.8 bits (54), Expect = 7.0
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 60 HTGDHKSQHESRDGDDVK---GYYSLHQPDGSIRHVDYHGDHH 99
H DH+ Q S + ++ ++S HQP+ S + H DH+
Sbjct: 613 HNHDHEHQSHSHNHEECNHNHDHHSDHQPEKSEKKEHRHIDHN 655
>At3g60750.1 68416.m06796 transketolase, putative strong similarity
to transketolase 1 [Capsicum annuum] GI:3559814;
contains Pfam profiles PF02779: Transketolase, pyridine
binding domain, PF02780: Transketolase, C-terminal
domain, PF00456: Transketolase, thiamine diphosphate
binding domain
Length = 741
Score = 25.4 bits (53), Expect = 9.2
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 74 DDVKGYYSLHQPDGSIRHVDY 94
DDVK ++S H P+G+ D+
Sbjct: 367 DDVKSHWSRHTPEGATLESDW 387
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.319 0.135 0.420
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,551,242
Number of Sequences: 28952
Number of extensions: 89613
Number of successful extensions: 246
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 233
Number of HSP's gapped (non-prelim): 17
length of query: 114
length of database: 12,070,560
effective HSP length: 72
effective length of query: 42
effective length of database: 9,986,016
effective search space: 419412672
effective search space used: 419412672
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 53 (25.4 bits)
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