Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000433-TA|BGIBMGA000433-PA|IPR000618|Insect cuticle
protein, IPR006025|Peptidase M, neutral zinc metallopeptidases,
zinc-binding site
(215 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34021| Best HMM Match : Zip (HMM E-Value=0) 43 2e-04
SB_3662| Best HMM Match : Cu-oxidase_3 (HMM E-Value=2.5) 39 0.003
SB_54180| Best HMM Match : Mfp-3 (HMM E-Value=1.9) 38 0.008
SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.026
SB_4030| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034
SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2) 35 0.059
SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5) 35 0.059
SB_9084| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.55
SB_51978| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_39107| Best HMM Match : Lyase_8 (HMM E-Value=0.016) 30 1.7
SB_59672| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_43576| Best HMM Match : EGF_CA (HMM E-Value=2.7e-38) 29 2.2
SB_38212| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_47890| Best HMM Match : DUF652 (HMM E-Value=7) 29 2.9
SB_8814| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_33717| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_30500| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29) 29 3.9
SB_44298| Best HMM Match : Herpes_US9 (HMM E-Value=8.9) 29 3.9
SB_32573| Best HMM Match : His_leader (HMM E-Value=0.0014) 28 5.1
SB_32416| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0021) 28 5.1
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 28 5.1
SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_35955| Best HMM Match : EMP24_GP25L (HMM E-Value=9.1) 28 6.8
SB_39183| Best HMM Match : LEA_4 (HMM E-Value=2.7) 27 9.0
SB_5942| Best HMM Match : Sec7 (HMM E-Value=3.1e-09) 27 9.0
>SB_34021| Best HMM Match : Zip (HMM E-Value=0)
Length = 808
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 20 DGHGHGHAVSSQSIV-LHTSHGHEHQGQAPAHHQILTTQHFEHGGHYDLGHHEVQHHGYA 78
DGHGH H S ++ H +HGH H+ +H H HG +D H ++HG++
Sbjct: 307 DGHGHSHGHSHENHGHSHENHGHSHENHGHSHEN-HGHSHKHHGHSHDNHGHSHENHGHS 365
Score = 34.3 bits (75), Expect = 0.078
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 20 DGHGHGHAVSSQSIVLHTSHGHEHQGQAPAHHQILTTQHFEHGGHYDLGHHE 71
+ HGH H S H H H++ G + +H EH DL HHE
Sbjct: 332 ENHGHSHENHGHSHK-HHGHSHDNHGHSHENHGHSHGHSHEHEPKQDLYHHE 382
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 9/59 (15%)
Query: 20 DGHGHGHAVSSQSIVLHTSHGHEHQ--GQAPAHHQILTTQHFEHG-GHYDLGHHEVQHH 75
+ HGH H S H +HGH H+ G + HH H HG H + GH H
Sbjct: 318 ENHGHSHENHGHS---HENHGHSHENHGHSHKHH---GHSHDNHGHSHENHGHSHGHSH 370
>SB_3662| Best HMM Match : Cu-oxidase_3 (HMM E-Value=2.5)
Length = 265
Score = 39.1 bits (87), Expect = 0.003
Identities = 43/202 (21%), Positives = 68/202 (33%), Gaps = 16/202 (7%)
Query: 22 HGHGHAVSSQSIVLHTSHGHEHQGQAPAHHQILTTQHFEHGGH--YDLGHHEVQHHGYAQ 79
H GH + T +G + G + I T+ ++G H ++ GH + G+ +
Sbjct: 17 HNTGHTKYIIRVTRSTQYGVHNTGHTK--YIIRVTRSTQYGSHEVHNTGHTKYTIRGHTK 74
Query: 80 VXXXXXXXXXXGLXXXXXXXXXXXXXXXXXXXXXXXXAHPKYAFEYKVEDPHTGDNKYQ- 138
G +Y E +TG KY
Sbjct: 75 YTIRVTRSTQYGSHEVHNTGHTKYTIRGHTKYTIRVTRSTQYGSH---EVHNTGHTKYII 131
Query: 139 HETRDGDVVKGVYSLHEADGTIRTVK---YAADK--HSGFNAEVHREGHITNDICKFVNR 193
TR G + +H TIR + Y ++ + VH GH T I +
Sbjct: 132 RVTRSTQY--GSHEVHNTGYTIRVTRSTQYGVHNTGYTKYTIRVHNTGH-TKYIIRGTQY 188
Query: 194 FNAEVHREGHAKHVVPEHQHGH 215
+ EVH GH K+++ H GH
Sbjct: 189 GSHEVHNTGHTKYIIRVHNTGH 210
>SB_54180| Best HMM Match : Mfp-3 (HMM E-Value=1.9)
Length = 125
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 39 HGHEHQGQAPAHHQILTTQHFEHGGH--YDLGHHEVQHHGY 77
+G H G H + H ++GGH YD GHH+ HH Y
Sbjct: 63 YGGYHHGYHGYHDHDVHIHHHDYGGHDHYDGGHHDGMHHDY 103
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 36 HTSHGHEHQGQAPAHHQILTTQHFEHGGHYDLGHHEVQH 74
H HG+ HH H++ GGH+D HH+ H
Sbjct: 68 HGYHGYHDHDVHIHHHDYGGHDHYD-GGHHDGMHHDYGH 105
>SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 736
Score = 35.9 bits (79), Expect = 0.026
Identities = 16/54 (29%), Positives = 20/54 (37%)
Query: 22 HGHGHAVSSQSIVLHTSHGHEHQGQAPAHHQILTTQHFEHGGHYDLGHHEVQHH 75
+G H + + H H H HQ HH H H H+ HH HH
Sbjct: 244 YGCYHKLKNPRHRYHHHHHHHHQHNHHQHHHHHHHHHHNHHHHHQQHHHHHHHH 297
>SB_4030| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 809
Score = 35.5 bits (78), Expect = 0.034
Identities = 22/57 (38%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 15 SARPQDGHGH--GHAVSSQSIVLHTSHGHEHQGQAPAHHQILTTQHFEHGGHYDLGH 69
S R +GHGH GHAVS H H+ Q A H + HFEH H H
Sbjct: 356 SQRHINGHGHTGGHAVSPTGSKCGIRH-HQTQHLARNHDHLARILHFEHHQHLPNAH 411
>SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2)
Length = 694
Score = 34.7 bits (76), Expect = 0.059
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Query: 30 SQSIVLHTSHGHEHQGQAPAHHQILTTQHFEHGGHYDLGHHEVQHH 75
S SIV++ H HQ HHQ H H H+ HH H+
Sbjct: 201 SPSIVIYRRHHQHHQHHHHHHHQ--HNHHHHHHNHHHHHHHHYHHY 244
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Query: 36 HTSHGHEHQGQAPAHHQILTTQHFEHGGHYDLGHHEVQHH 75
H H H H Q HH H H HY HH HH
Sbjct: 213 HHQHHHHHHHQHNHHHH-HHNHHHHHHHHYHHYHHHHHHH 251
>SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5)
Length = 237
Score = 34.7 bits (76), Expect = 0.059
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Query: 17 RPQDGHGHGHAVSSQSIVLHTSHGHEHQGQAPAHHQILTTQHFEHGGHYDLGHHEVQHHG 76
R + H H H S+ I+L H +H + HH +H H ++ HH HH
Sbjct: 168 RHRHHHHHHHHPSTIIIILRHRH-RQHYNRHRRHHHHHRHRHHHHHPNHPYSHHYPNHHR 226
Query: 77 YAQ 79
Q
Sbjct: 227 QQQ 229
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Query: 22 HGHGHAVSSQSIVLHTSHGHEHQGQAPAHHQILTTQHFEHGGHYDLGHHEVQH 74
H H H +S I H H H H IL +H +H + HH +H
Sbjct: 155 HHHHHPLSIAIIHRHR-HHHHHHHHPSTIIIILRHRHRQHYNRHRRHHHHHRH 206
>SB_9084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 31.5 bits (68), Expect = 0.55
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 47 APAHHQILTTQHFEHGGHYDLGHHEVQHHGY 77
AP HH H +H H+D HH+ QHH +
Sbjct: 2 APNHHHHHDHHHHDH-HHHDHQHHDHQHHDH 31
Score = 31.1 bits (67), Expect = 0.73
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Query: 36 HTSHGHEHQGQAPAHHQILTTQHFEHGGHYDLGHHEVQH 74
H H H H HQ QH +H H+D HH+ H
Sbjct: 6 HHHHDHHHHDHHHHDHQHHDHQHHDH-QHHDHHHHDHHH 43
Score = 31.1 bits (67), Expect = 0.73
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Query: 39 HGHEHQGQAPAHHQILTTQHFEHGGHYDLGHHEVQHHGY 77
H H+H HH QH +H H+D HH+ HH +
Sbjct: 7 HHHDHHHHDHHHHD---HQHHDH-QHHDHQHHDHHHHDH 41
>SB_51978| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 167
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 50 HHQILTTQHFEHGGHYDLGHHEVQHH 75
HHQ + HF H ++ L H ++ HH
Sbjct: 102 HHQKQSHHHFHHNPYHYLRHSQLHHH 127
>SB_39107| Best HMM Match : Lyase_8 (HMM E-Value=0.016)
Length = 872
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 125 YKVEDPHTGDNKYQHETRDGDVVKGVYSLHEADGTIRTVKYAADKHSGFNAEVHREGH 182
YK +P D + +DG KG Y L+ G++ +++ K G E GH
Sbjct: 135 YKTSNPTISDTTLEKRLQDGSPSKGSYYLNTI-GSLDILQWVVGKAGGAAPETTPSGH 191
>SB_59672| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 22 HGHGHAVSSQSIVLHTSHGHEHQGQAPAHHQILTTQHF 59
H H H + + HT H H H ++ LTT+H+
Sbjct: 57 HDHTHDTITLTTPAHTLHYHTHVATTQHYNITLTTRHY 94
>SB_43576| Best HMM Match : EGF_CA (HMM E-Value=2.7e-38)
Length = 641
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 32 SIVLHTSHGHEHQGQAPAHHQILTTQHFEHGGHYDLGHHEVQHH 75
+IV++ H + Q Q HHQ QH H H + +HH
Sbjct: 564 NIVINQHHHQKQQNQHHRHHQKQQNQHHRH--HQKKQNQHYRHH 605
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/35 (34%), Positives = 14/35 (40%)
Query: 36 HTSHGHEHQGQAPAHHQILTTQHFEHGGHYDLGHH 70
H H + Q Q HHQ QH+ H HH
Sbjct: 579 HHRHHQKQQNQHHRHHQKKQNQHYRHHQKQQNQHH 613
>SB_38212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1892
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/74 (27%), Positives = 26/74 (35%), Gaps = 3/74 (4%)
Query: 4 LTXXXXXXXXVSARPQDGHG-HGHAVSSQSIVLHTSHGHEHQGQAPAHHQILTTQHFEHG 62
+T V+ GH GHAV+ ++ HT GH G H + H
Sbjct: 1390 VTGHAVTGHTVTGHAVTGHTVTGHAVTGHTVTGHTVTGHTVTGHTVTDHTVTGHTVTGHA 1449
Query: 63 --GHYDLGHHEVQH 74
GH GH H
Sbjct: 1450 VTGHTVTGHAVTDH 1463
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Query: 25 GHAVSSQSIVLHTSHGHEHQGQAPAHHQILTTQHFEHGGHYDLGHHEVQH 74
GH V+ ++ HT GH +G H + T H GH GH H
Sbjct: 1272 GHTVTGHTVTGHTVRGHTVRGHTVRGHTV--TDH-TVTGHNVTGHKVTGH 1318
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/64 (28%), Positives = 24/64 (37%), Gaps = 3/64 (4%)
Query: 14 VSARPQDGHG-HGHAVSSQSIVLHTSHGHEHQGQAPAHHQIL--TTQHFEHGGHYDLGHH 70
V+ GH GH V+ ++ HT GH G H + T + GH GH
Sbjct: 1240 VTGHTVTGHNVTGHTVTGHTVTGHTITGHTVTGHTVTGHTVTGHTVRGHTVRGHTVRGHT 1299
Query: 71 EVQH 74
H
Sbjct: 1300 VTDH 1303
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/52 (30%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Query: 25 GHAVSSQSIVLHTSHGHEHQGQAPAHHQILTTQHFEH--GGHYDLGHHEVQH 74
GH V+ + HT GH G A H + +H GH GH H
Sbjct: 1327 GHFVTDHIVTGHTITGHTVTGHAVTDHTVRGPTVTDHTVTGHTVTGHTVTDH 1378
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Query: 25 GHAVSSQSIVLHTSHGHEHQGQAPAHHQILTTQHFEHGGHYDLGHHEVQH 74
GH V+ ++ HT GH G A H + T H GH GH H
Sbjct: 1372 GHTVTDHTVTDHTVTGHTVTGHAVTGHTV--TGH-AVTGHTVTGHAVTGH 1418
>SB_47890| Best HMM Match : DUF652 (HMM E-Value=7)
Length = 384
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 120 KYAFEYKVEDPHTGDNKYQHETRDGDVVKGVYSLHEADGTIRTVKYAAD 168
KYA KV P KY H+ + KG Y+L+ T+ KYA D
Sbjct: 79 KYALNVKV--PKLDKGKYAHDVTVPTLDKGKYALNVTVPTLDKGKYAFD 125
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 120 KYAFEYKVEDPHTGDNKYQHETRDGDVVKGVYSLHEADGTIRTVKYA 166
KYAF+ V P KY H+ + KG Y+L+ T+ KYA
Sbjct: 219 KYAFDVTV--PTLDKGKYAHDVTVPTLDKGKYALNVTVPTLDKGKYA 263
>SB_8814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/53 (30%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Query: 24 HGHAVSSQSIVLHTSHGHEHQGQAPAHHQILTTQHFEHGGH-YDLGHHEVQHH 75
H H + LH +H HE H T + H H YD HE H
Sbjct: 454 HTHETTRHDTHLHDTHTHETTRHDTHLHDTHTHETTRHDTHLYDTHTHETTRH 506
>SB_33717| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 19 QDGHGHGHAVSSQSIVLHTSHGHEHQGQAP 48
Q GHGH H S HT+ G H +P
Sbjct: 136 QKGHGHSHGGMSGHGHSHTTRGQSHSHTSP 165
>SB_30500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2014
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 148 KGVYSLHEADGTIRTVKYAADKHSGFNAEVH 178
KG Y H+ DG RT++Y + G+ H
Sbjct: 1742 KGSYDTHDVDGRRRTIEYYSGTPQGYLPPAH 1772
>SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29)
Length = 1779
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 36 HTSHGHEHQG--QAPAHHQILTTQHFEHGGHYDLGHHEVQHH 75
H + G + G Q+ HH+ +H + H+ HH +HH
Sbjct: 324 HETFGRQRHGLRQSKKHHRNKHYRHHDRNHHHRHHHHHHKHH 365
>SB_44298| Best HMM Match : Herpes_US9 (HMM E-Value=8.9)
Length = 138
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 24 HGHAVSSQSIVLH-TSHGHEHQGQAPAHHQILTTQH-FEHGGHYDLGHHEVQHH 75
H A+ + +I + T H H +H++ +H + H H+ HH+ HH
Sbjct: 8 HSVAIDNSNIGNNVTRHSDMHLRFYGCYHKLKNPRHRYHHHHHHQHNHHQHHHH 61
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 50 HHQILTTQHFEHGGHYDLGHHEVQHH 75
HH H +H H++ HH QHH
Sbjct: 47 HHHHHQHNHHQHHHHHNHHHHHQQHH 72
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Query: 36 HTSHGHEHQGQAPAHHQILTTQHFEHGGHYDLGHHEVQHHGYAQV 80
H H+ HHQ QH H H+ HH+ HH + +
Sbjct: 36 HKLKNPRHRYHHHHHHQHNHHQHHHHHNHHH--HHQQHHHHHHHI 78
>SB_32573| Best HMM Match : His_leader (HMM E-Value=0.0014)
Length = 134
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Query: 24 HGHAVSSQSIVLHTSHGHEHQGQAPAHHQIL 54
H H SS I++H H H HHQ L
Sbjct: 104 HHHPSSSSIIIIHHHHHHPSSSSIINHHQSL 134
>SB_32416| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0021)
Length = 358
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 4/46 (8%)
Query: 39 HGHEHQGQAPAHHQILTTQHFEHGGHYD----LGHHEVQHHGYAQV 80
H H + P HH+ H +G H + + HH V H + V
Sbjct: 166 HPHPYPSSGPMHHRHYRRWHNSNGAHQEWAQPVDHHAVPIHAHTGV 211
>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
Length = 330
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Query: 23 GHGHAVSSQSIVLHTSHGHEHQGQAPAHHQILTTQHFEHGGHYDLGHHE 71
G G SS S +H SH +H P+ H + H H H+ H++
Sbjct: 192 GSGREKSSHSRSVHKSHSSKH--SHPSSHSTNRSHHHHH--HHSSSHYK 236
>SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2202
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/40 (32%), Positives = 15/40 (37%), Gaps = 6/40 (15%)
Query: 36 HTSHGHEHQGQAPAHHQILTTQHFEHGGHYDLGHHEVQHH 75
H H H H HH Q+ H H HH+ HH
Sbjct: 946 HKRHRHSH------HHHYQHYQYNHHHDHQSHQHHDSHHH 979
>SB_35955| Best HMM Match : EMP24_GP25L (HMM E-Value=9.1)
Length = 308
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Query: 120 KYAFEYKVEDPHTGDNKYQHETRDGDVVKGVYSLHEADGTIRTVKYAAD 168
KYA KV P KY H+ + KG Y+L T+ KYA D
Sbjct: 184 KYALNVKV--PTLDKGKYAHDVTVPTLDKGKYALDVTVPTLDKGKYAFD 230
>SB_39183| Best HMM Match : LEA_4 (HMM E-Value=2.7)
Length = 300
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 132 TGDNKYQHETRDGDVVKGVYSLHEADGTIRTVKYAAD 168
T + +Y E G + KG ++ + GT R +YA D
Sbjct: 42 TREARYAKEDTRGKICKGRHARQDMQGTKRETRYARD 78
>SB_5942| Best HMM Match : Sec7 (HMM E-Value=3.1e-09)
Length = 304
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Query: 50 HHQILTTQHFEHGGHYDLGHHEVQHHGYAQV 80
HH +L H H H+ HH HH + +
Sbjct: 160 HHHLL--HHHHHHWHHHHHHHRHHHHSFTTI 188
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.133 0.420
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,819,842
Number of Sequences: 59808
Number of extensions: 254240
Number of successful extensions: 869
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 681
Number of HSP's gapped (non-prelim): 117
length of query: 215
length of database: 16,821,457
effective HSP length: 79
effective length of query: 136
effective length of database: 12,096,625
effective search space: 1645141000
effective search space used: 1645141000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 58 (27.5 bits)
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