Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000432-TA|BGIBMGA000432-PA|IPR000618|Insect cuticle
protein
(59 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1101 - 26079214-26080368 30 0.27
10_08_1052 - 22567937-22568329,22568436-22568669,22568787-225691... 27 1.5
06_03_1283 - 28957729-28959258,28959354-28959550,28959824-289600... 27 1.9
06_01_0504 + 3632108-3632281,3633532-3633699,3633797-3633883,363... 27 2.5
08_02_0707 - 20212190-20214592 26 3.3
07_03_0363 + 17225472-17226778,17226910-17226917,17227313-172274... 26 4.4
06_01_0946 + 7289182-7289226,7291366-7291441,7291542-7291655,729... 26 4.4
12_02_1096 + 26050224-26051058,26051599-26051831,26051940-260522... 25 5.9
06_03_0742 + 24027506-24027721,24028835-24029004,24029893-240300... 25 5.9
05_01_0136 + 915140-915487,915781-916392 25 5.9
03_02_0797 - 11296426-11297258,11297745-11297901 25 5.9
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 25 5.9
05_06_0266 + 26779191-26779227,26781089-26781218,26781344-26782013 25 7.7
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485... 25 7.7
01_06_0430 + 29299970-29300031,29300162-29300294,29301057-293011... 25 7.7
>12_02_1101 - 26079214-26080368
Length = 384
Score = 29.9 bits (64), Expect = 0.27
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 16 DHHTKDHKSQHETRDGDAVKGYYALHEPDGSERYIHYHG 54
DH+ DHK+ GD V+ Y D E+ +HY+G
Sbjct: 35 DHNHPDHKADI-LMYGDMVEAAYKAFAGDDDEKEVHYYG 72
>10_08_1052 -
22567937-22568329,22568436-22568669,22568787-22569111,
22569239-22569484,22569576-22569916,22570070-22570150,
22570275-22570394,22570549-22570650,22570900-22571035,
22571210-22571362,22572605-22572906
Length = 810
Score = 27.5 bits (58), Expect = 1.5
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 13 KVEDHHTKD-HKSQHETRDGDAVKGYY-ALHEPDGSERYIHYHGDKH 57
K + HH + + + E++ A YY HE + + HYH +H
Sbjct: 736 KAQQHHHRQVEEEEEESKSSQATTHYYHHHHEQTTTTTHHHYHQHEH 782
>06_03_1283 -
28957729-28959258,28959354-28959550,28959824-28960026,
28960097-28960424,28960524-28960661,28960765-28961020,
28961529-28961626,28963104-28963367,28964395-28964584
Length = 1067
Score = 27.1 bits (57), Expect = 1.9
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
Query: 4 THPKYEFEYKVE---DHHTKDHKSQHETRD 30
THP E +E DHH H +H+ D
Sbjct: 962 THPVQEHSISIEESSDHHEHHHNEEHKAED 991
>06_01_0504 +
3632108-3632281,3633532-3633699,3633797-3633883,
3634766-3634876,3635114-3635205,3635288-3635393,
3635475-3635561,3637796-3638209
Length = 412
Score = 26.6 bits (56), Expect = 2.5
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 29 RDGDAVKGYYALHEPDGS 46
RDG AV GY A +PDG+
Sbjct: 6 RDGAAVAGYMAEDDPDGA 23
>08_02_0707 - 20212190-20214592
Length = 800
Score = 26.2 bits (55), Expect = 3.3
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 7/46 (15%)
Query: 15 EDHHTKDHKSQ---HE----TRDGDAVKGYYALHEPDGSERYIHYH 53
EDHH DH Q H GDA K ++ H D S H++
Sbjct: 521 EDHHNHDHALQGVNHNGACCEHHGDANKSHHHDHHHDSSNEESHHN 566
>07_03_0363 +
17225472-17226778,17226910-17226917,17227313-17227488,
17227822-17227882,17227955-17228053,17228155-17228249,
17228411-17228482,17228668-17228735,17228934-17229390,
17229486-17229596
Length = 817
Score = 25.8 bits (54), Expect = 4.4
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 3 KTHPKYEFEYKVEDHHTKDHKSQ-HETRDGD 32
KT PK E +++ +D KD K + TRD D
Sbjct: 230 KTEPKTEDKFRDKDRKKKDEKHRDFGTRDND 260
>06_01_0946 +
7289182-7289226,7291366-7291441,7291542-7291655,
7291881-7292447,7293047-7293792
Length = 515
Score = 25.8 bits (54), Expect = 4.4
Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 22 HKSQHETRDGDAVKGYYALHEPDGSERYIHYHGDKH 57
H+ + RD ++ +Y L++ +YIH HG H
Sbjct: 247 HEGKANYRDDQNMEKFY-LYKKGEEHKYIHSHGHGH 281
>12_02_1096 +
26050224-26051058,26051599-26051831,26051940-26052230,
26052860-26052988,26053082-26053255,26053334-26053547,
26053881-26053968,26054195-26054239,26056969-26057015,
26057441-26057727,26057812-26058051,26058141-26058257
Length = 899
Score = 25.4 bits (53), Expect = 5.9
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 3 KTHPKYEFEYKVEDHHTKDHKSQHETRDGDAVKGYYALHEPDGSERYIHYHGDKHS 58
K H K++ + + +D K HK +H+ R D K + D S H G HS
Sbjct: 802 KKHKKHKDKDRDKDKEHKKHKHRHKDRSKDKDKDKDKDKKKDKSGH--HDSGGDHS 855
>06_03_0742 + 24027506-24027721,24028835-24029004,24029893-24030052,
24030162-24030455,24031490-24031717,24031827-24032006,
24032079-24032238,24032591-24032617,24033426-24033613,
24034269-24034532,24035123-24035218,24035311-24035399,
24035473-24035620,24035842-24036051,24036141-24036440,
24037906-24038248,24038747-24038952,24039071-24039273,
24040021-24040117,24040148-24040222,24040328-24040602,
24041116-24041256,24041469-24042339,24042481-24042520,
24042605-24043050
Length = 1808
Score = 25.4 bits (53), Expect = 5.9
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 4 THPKYEFEYKVEDHHTKDHKSQHETRD 30
THPK + E + H +DH+++ + D
Sbjct: 999 THPKEDHEAEDSTHPKEDHEAEGDDED 1025
>05_01_0136 + 915140-915487,915781-916392
Length = 319
Score = 25.4 bits (53), Expect = 5.9
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 11 EYKVEDHHTKDHKSQHETRDGDAVKGYYALHEPDG--SERYIHY 52
EYK + H KSQH + DA+ +A+ + Y HY
Sbjct: 37 EYKKDQHANFIWKSQHHMKCADALNKEFAMGVTSAQVTRHYRHY 80
>03_02_0797 - 11296426-11297258,11297745-11297901
Length = 329
Score = 25.4 bits (53), Expect = 5.9
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 18 HTKDHKSQHETRDGDAVKGYYALHEPDGSERYIHYHGD 55
H +D S+ E GD +G + + E YI HG+
Sbjct: 5 HERDASSEEEVMGGDLRRGPWTVEEDLLLVNYIAAHGE 42
>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 25.4 bits (53), Expect = 5.9
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 4 THPKYEFEYKVEDHHTK-DHKSQHETRDGDAVKGYYALHEPD 44
T PK E +E+ T+ H+S HE R G + +L EPD
Sbjct: 2665 TSPKASQEDALEEVGTELPHESLHENRHGAKDEQTLSLIEPD 2706
>05_06_0266 + 26779191-26779227,26781089-26781218,26781344-26782013
Length = 278
Score = 25.0 bits (52), Expect = 7.7
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 1 MFKTHPKYEFEYKVEDHHTKDHK 23
M + H Y EY+VED T +HK
Sbjct: 236 MEQQHSGYGGEYQVEDDATLEHK 258
>05_03_0235 -
10747649-10748118,10748226-10748314,10748477-10748574,
10748934-10749046,10749107-10749200,10749557-10749589,
10749734-10749851,10750110-10750210,10751036-10751233,
10751337-10751471,10751752-10751830,10753650-10753738,
10753835-10753987,10754100-10754285
Length = 651
Score = 25.0 bits (52), Expect = 7.7
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 35 KGYYALHEPDGSERYIHYHGDKH 57
KG + H D R+ H HGD H
Sbjct: 532 KGRHHRHHHDHRHRHGHSHGDHH 554
>01_06_0430 +
29299970-29300031,29300162-29300294,29301057-29301160,
29302201-29302372,29302488-29302628,29302707-29303055,
29303133-29305477
Length = 1101
Score = 25.0 bits (52), Expect = 7.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 11 EYKVEDHHTKDHKSQHETRDGDAVKGYYA 39
E ++ H+ KD +S+H T D + YY+
Sbjct: 516 EAQLGGHNIKDTESKHATFDQENTDNYYS 544
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.134 0.425
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,159,199
Number of Sequences: 37544
Number of extensions: 73494
Number of successful extensions: 148
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 137
Number of HSP's gapped (non-prelim): 18
length of query: 59
length of database: 14,793,348
effective HSP length: 39
effective length of query: 20
effective length of database: 13,329,132
effective search space: 266582640
effective search space used: 266582640
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 52 (25.0 bits)
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