GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000432-TA|BGIBMGA000432-PA|IPR000618|Insect cuticle
protein
         (59 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC094696-1|AAH94696.1|  356|Homo sapiens zinc finger, CW type wi...    29   2.3  
Y00064-1|CAA68271.1|  677|Homo sapiens protein ( Human mRNA for ...    27   7.0  
CR456726-1|CAG33007.1|  677|Homo sapiens CHGB protein.                 27   7.0  
BC000375-1|AAH00375.1|  677|Homo sapiens chromogranin B (secreto...    27   7.0  
AL035461-1|CAB55272.1|  677|Homo sapiens chromogranin B (secreto...    27   7.0  
AB209712-1|BAD92949.1|  711|Homo sapiens chromogranin B precurso...    27   9.3  

>BC094696-1|AAH94696.1|  356|Homo sapiens zinc finger, CW type with
           PWWP domain 2 protein.
          Length = 356

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%)

Query: 32  DAVKGYYALHEPDGS--ERYIHYHGDKHS 58
           D  KG Y  ++PDG+  E +I + GD HS
Sbjct: 119 DRFKGKYVTYDPDGNVEEYHIEFLGDPHS 147


>Y00064-1|CAA68271.1|  677|Homo sapiens protein ( Human mRNA for
           secretogranin I (chromogranin B). ).
          Length = 677

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 16  DHHTKDHK-SQHETRDGDAVKGYYALHEPDGSERYIHYHG 54
           DHH+  ++ S+ E   G+ +KGY  +  P+  E +  Y G
Sbjct: 326 DHHSTHYRASEEEPEYGEEIKGYPGVQAPEDLE-WERYRG 364


>CR456726-1|CAG33007.1|  677|Homo sapiens CHGB protein.
          Length = 677

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 16  DHHTKDHK-SQHETRDGDAVKGYYALHEPDGSERYIHYHG 54
           DHH+  ++ S+ E   G+ +KGY  +  P+  E +  Y G
Sbjct: 326 DHHSTHYRASEEEPEYGEEIKGYPGVQAPEDLE-WERYRG 364


>BC000375-1|AAH00375.1|  677|Homo sapiens chromogranin B
           (secretogranin 1) protein.
          Length = 677

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 16  DHHTKDHK-SQHETRDGDAVKGYYALHEPDGSERYIHYHG 54
           DHH+  ++ S+ E   G+ +KGY  +  P+  E +  Y G
Sbjct: 326 DHHSTHYRASEEEPEYGEEIKGYPGVQAPEDLE-WERYRG 364


>AL035461-1|CAB55272.1|  677|Homo sapiens chromogranin B
           (secretogranin 1) protein.
          Length = 677

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 16  DHHTKDHK-SQHETRDGDAVKGYYALHEPDGSERYIHYHG 54
           DHH+  ++ S+ E   G+ +KGY  +  P+  E +  Y G
Sbjct: 326 DHHSTHYRASEEEPEYGEEIKGYPGVQAPEDLE-WERYRG 364


>AB209712-1|BAD92949.1|  711|Homo sapiens chromogranin B precursor
           variant protein.
          Length = 711

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 16  DHHTKDHK-SQHETRDGDAVKGYYALHEPDGSERYIHYHG 54
           DHH+  ++ S+ E   G+ +KGY  +  P+  E +  Y G
Sbjct: 360 DHHSTHYRASEEEPEYGEEIKGYPGVQGPEDLE-WERYRG 398


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.314    0.134    0.425 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,306,262
Number of Sequences: 224733
Number of extensions: 365598
Number of successful extensions: 468
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 468
Number of HSP's gapped (non-prelim): 6
length of query: 59
length of database: 73,234,838
effective HSP length: 39
effective length of query: 20
effective length of database: 64,470,251
effective search space: 1289405020
effective search space used: 1289405020
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 57 (27.1 bits)