Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000431-TA|BGIBMGA000431-PA|IPR000618|Insect cuticle
protein
(59 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50965| Best HMM Match : HEAT (HMM E-Value=1.2e-12) 28 1.3
SB_43387| Best HMM Match : DUF1103 (HMM E-Value=1.5e-07) 27 2.2
SB_36312| Best HMM Match : Ion_trans (HMM E-Value=0) 27 2.2
SB_35651| Best HMM Match : NUMOD3 (HMM E-Value=3.2) 27 2.2
SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.2
SB_34021| Best HMM Match : Zip (HMM E-Value=0) 27 2.2
SB_10578| Best HMM Match : NUMOD3 (HMM E-Value=3.2) 27 2.2
SB_44681| Best HMM Match : DUF1109 (HMM E-Value=0.85) 27 2.9
SB_14021| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 3.8
SB_38722| Best HMM Match : OmpH (HMM E-Value=1.4) 26 3.8
SB_48322| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 6.7
SB_32651| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 6.7
SB_45248| Best HMM Match : rve (HMM E-Value=2.1e-05) 25 6.7
SB_43038| Best HMM Match : AAA (HMM E-Value=0.84) 25 6.7
SB_28193| Best HMM Match : rve (HMM E-Value=2.1e-05) 25 6.7
SB_20150| Best HMM Match : Pox_A32 (HMM E-Value=0.049) 25 6.7
SB_32896| Best HMM Match : F5_F8_type_C (HMM E-Value=8.6e-17) 25 8.9
SB_25337| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.9
SB_41631| Best HMM Match : Ank (HMM E-Value=0.00018) 25 8.9
>SB_50965| Best HMM Match : HEAT (HMM E-Value=1.2e-12)
Length = 492
Score = 27.9 bits (59), Expect = 1.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 6 PKYEFEYKVEDHHTKDHKSQHETRDGDAVKG 36
P E + K H +K H QHE DG++ G
Sbjct: 237 PDSEQDIKPRFHKSKTHSQQHEDGDGESDDG 267
>SB_43387| Best HMM Match : DUF1103 (HMM E-Value=1.5e-07)
Length = 644
Score = 27.1 bits (57), Expect = 2.2
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 9/64 (14%)
Query: 3 KTHPKYEFEYKVEDHHTK----DHKSQH-ETRDGDAVKGYYALHEPDGSERHVH----YH 53
K H + + +DHH D+K H +RD D + +PD ++H+H Y+
Sbjct: 332 KDHHIHSKDPDNKDHHIHSKDPDNKDYHIHSRDPDNKDHHIHSKDPDNKDQHIHSRDPYN 391
Query: 54 GDKH 57
D H
Sbjct: 392 KDHH 395
Score = 26.2 bits (55), Expect = 3.8
Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Query: 3 KTHPKYEFEYKVEDHHTK----DHKSQH-ETRDGDAVKGYYALHEPDGSERHVH 51
K H + + +DHH D+K H ++D D + + +PD + H+H
Sbjct: 92 KDHHIHSKDPDNKDHHIHIRDTDNKDHHIHSKDPDNMDHHIHSKDPDNKDHHIH 145
Score = 25.0 bits (52), Expect = 8.9
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 16 DHHTKDHKSQHETRDGDAVKGYYALHEPDGSERHVH 51
D + KDH ++D D + +PD +RH+H
Sbjct: 484 DPNNKDHHIH--SKDPDNKDHHIRSKDPDNKDRHIH 517
>SB_36312| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 1283
Score = 27.1 bits (57), Expect = 2.2
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 7 KYEFEYKVEDHHTKDHKSQHETRDGDAVKGYYAL-HEPDGSERHVHYHG-DKHS 58
+Y E E HT + + TR +V+ Y+ H P R+ HG KHS
Sbjct: 965 RYRIERSHESVHTPNDHRRSSTRSEHSVQRRYSNEHSPSRKRRNSDNHGHKKHS 1018
>SB_35651| Best HMM Match : NUMOD3 (HMM E-Value=3.2)
Length = 228
Score = 27.1 bits (57), Expect = 2.2
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 16 DHHTKDHKSQHE-TRDGDAVKGYYALHEPDGSERHVHYHGDKH 57
DHH KDHK Q + +D H D S+ H H H
Sbjct: 77 DHHHKDHKDQKDHAKDQSKDHKDQKDHAKDHSKDHPKDHPKNH 119
>SB_24438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 27.1 bits (57), Expect = 2.2
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 3 KTHPKYEFEYKVEDHHTKDH-KSQHETRDGDAVKGYYALHEPDGSERHVH 51
KT +K H T H +S+HETR + + + HE E+ H
Sbjct: 50 KTSRHERSRHKTSRHETSRHERSRHETRQHERSRHKTSRHETSRHEKSRH 99
>SB_34021| Best HMM Match : Zip (HMM E-Value=0)
Length = 808
Score = 27.1 bits (57), Expect = 2.2
Identities = 14/44 (31%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Query: 16 DHHTKDHKSQHETRDGDAVKGYYALHEPDGSERHVHYHGDKHSG 59
D H H HE G + + + HE G H H KH G
Sbjct: 307 DGHGHSHGHSHENH-GHSHENHGHSHENHGHSHENHGHSHKHHG 349
>SB_10578| Best HMM Match : NUMOD3 (HMM E-Value=3.2)
Length = 379
Score = 27.1 bits (57), Expect = 2.2
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 16 DHHTKDHKSQHE-TRDGDAVKGYYALHEPDGSERHVHYHGDKH 57
DHH KDHK Q + +D H D S+ H H H
Sbjct: 18 DHHHKDHKDQKDHAKDQSKDHKDQKDHAKDHSKDHPKDHPKNH 60
>SB_44681| Best HMM Match : DUF1109 (HMM E-Value=0.85)
Length = 377
Score = 26.6 bits (56), Expect = 2.9
Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Query: 6 PKYEFEYKVEDHHTKDHKSQHETRDGDAVKGYYALHEPDGSERHVHYH 53
P Y +Y DHH D+ D Y+ H + R +HYH
Sbjct: 84 PHYHDDYHYYDHHYDDYHHDDYHHDYHH-HDYHHDHYEEPEYRSLHYH 130
>SB_14021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 26.2 bits (55), Expect = 3.8
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 17 HHTKDHKSQHETRDGDAVKGYYALHEPDGSERHVHYHGDKH 57
HHT +SQ++ R+ D++ +P ER+ H+ +H
Sbjct: 132 HHTHRQRSQYKPRENDSLH----RRKPLDHERYQHHQTTRH 168
>SB_38722| Best HMM Match : OmpH (HMM E-Value=1.4)
Length = 469
Score = 26.2 bits (55), Expect = 3.8
Identities = 13/48 (27%), Positives = 20/48 (41%)
Query: 4 THPKYEFEYKVEDHHTKDHKSQHETRDGDAVKGYYALHEPDGSERHVH 51
TH + V+D +D+K H R + + Y L G R +H
Sbjct: 246 THIRTSVHRNVDDAAEQDYKDHHRRRSHNRPRRRYRLGWAQGLTRELH 293
>SB_48322| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 169
Score = 25.4 bits (53), Expect = 6.7
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 13 KVEDHHTKDHKSQHETRDGDAVKGYYALHEPDGSERHVHYH 53
++ H ++QH+ RD K + A PDG E V H
Sbjct: 35 ELSKHQLTLAEAQHKARDRRKWKRFVAALCPDGDEEQVPAH 75
>SB_32651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 725
Score = 25.4 bits (53), Expect = 6.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 12 YKVEDHHTKDHKSQHETRDGDAVK 35
++V DH T D K QHE A++
Sbjct: 566 FEVSDHVTPDEKYQHELNKNRALR 589
>SB_45248| Best HMM Match : rve (HMM E-Value=2.1e-05)
Length = 809
Score = 25.4 bits (53), Expect = 6.7
Identities = 13/48 (27%), Positives = 20/48 (41%)
Query: 4 THPKYEFEYKVEDHHTKDHKSQHETRDGDAVKGYYALHEPDGSERHVH 51
TH + V+D +D+K H R + + Y L G R +H
Sbjct: 350 THIRTSVHRNVDDAAEQDYKDHHRRRSHNRPRRRYRLGWAQGLARGLH 397
>SB_43038| Best HMM Match : AAA (HMM E-Value=0.84)
Length = 957
Score = 25.4 bits (53), Expect = 6.7
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 12 YKVEDHHTKDHKSQHETRDGDAVKGYYALHEPDGSERHVH 51
Y V+D +D+K H R + + Y L G R +H
Sbjct: 826 YNVDDAAEQDYKDHHRRRSHNRPRRRYRLGWAQGLTRGLH 865
>SB_28193| Best HMM Match : rve (HMM E-Value=2.1e-05)
Length = 983
Score = 25.4 bits (53), Expect = 6.7
Identities = 13/48 (27%), Positives = 20/48 (41%)
Query: 4 THPKYEFEYKVEDHHTKDHKSQHETRDGDAVKGYYALHEPDGSERHVH 51
TH + V+D +D+K H R + + Y L G R +H
Sbjct: 524 THIRTSVHRNVDDAAEQDYKDHHRRRSHNRPRRRYRLGWAQGLARGLH 571
>SB_20150| Best HMM Match : Pox_A32 (HMM E-Value=0.049)
Length = 849
Score = 25.4 bits (53), Expect = 6.7
Identities = 13/48 (27%), Positives = 20/48 (41%)
Query: 4 THPKYEFEYKVEDHHTKDHKSQHETRDGDAVKGYYALHEPDGSERHVH 51
TH + V+D +D+K H R + + Y L G R +H
Sbjct: 767 THIRTSVHRNVDDAAEQDYKDHHRRRSHNRPRRRYRLGWAQGLARGLH 814
>SB_32896| Best HMM Match : F5_F8_type_C (HMM E-Value=8.6e-17)
Length = 278
Score = 25.0 bits (52), Expect = 8.9
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 5 HPKYEFEYKVEDHH-TKDHKSQHETRDGDAVKGYY 38
HP Y Y+ DH+ +DH +H + YY
Sbjct: 57 HPHYHHHYRHNDHYFHQDHLYRHYLSTSALYEYYY 91
>SB_25337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1879
Score = 25.0 bits (52), Expect = 8.9
Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Query: 6 PKYEFEYKVEDHHTKDHKSQHETRDGDAVKGYYALHEPDGSE--RHVHYHGDKHSG 59
PK E DH + + H+ D KG+ ++ PD + + DK+ G
Sbjct: 347 PKEFRELSKFDHQRRYRRYDHQNFTDDLEKGHGTMNAPDAGDLWKEGQQFADKYHG 402
>SB_41631| Best HMM Match : Ank (HMM E-Value=0.00018)
Length = 353
Score = 25.0 bits (52), Expect = 8.9
Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 15 EDHHTKDHKSQHETRDG-DAVKGYYALHEPD 44
+ HH DH+ + RDG K Y H D
Sbjct: 170 DSHHHSDHRDEESHRDGRKRSKDYEKQHHND 200
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.312 0.133 0.416
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,623,757
Number of Sequences: 59808
Number of extensions: 92084
Number of successful extensions: 211
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 198
Number of HSP's gapped (non-prelim): 24
length of query: 59
length of database: 16,821,457
effective HSP length: 38
effective length of query: 21
effective length of database: 14,548,753
effective search space: 305523813
effective search space used: 305523813
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 52 (25.0 bits)
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