Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000430-TA|BGIBMGA000430-PA|IPR000618|Insect cuticle
protein
(222 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribo... 31 0.50
AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribo... 31 0.50
AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribo... 31 0.50
Z70756-11|CAI46587.1| 228|Caenorhabditis elegans Hypothetical p... 28 4.6
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 28 6.1
U64852-4|AAB04967.1| 192|Caenorhabditis elegans Galectin protei... 27 8.1
U13875-11|AAA21158.1| 1193|Caenorhabditis elegans Rna polymerase... 27 8.1
U10333-1|AAA50224.1| 859|Caenorhabditis elegans RNA polymerase ... 27 8.1
AB038501-1|BAB11966.1| 192|Caenorhabditis elegans galectin LEC-... 27 8.1
>AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-5 protein.
Length = 2238
Score = 31.5 bits (68), Expect = 0.50
Identities = 20/70 (28%), Positives = 31/70 (44%)
Query: 103 AAAPVHYASPVHYAAPVAKVIAPAHKVLVSAHHEEEYAHPKYDFAYSVADGHSGDNKSQH 162
A P A P+ + A I A V A E + + S DG + +NKS+H
Sbjct: 1504 ATGPRCVAVPMRFGATSRAFIPAAAFASVPARVESDEEEEDNSGSESGEDGAASENKSEH 1563
Query: 163 ESRDGDAVHG 172
S +G++ +G
Sbjct: 1564 GSENGESGNG 1573
>AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform a protein.
Length = 2276
Score = 31.5 bits (68), Expect = 0.50
Identities = 20/70 (28%), Positives = 31/70 (44%)
Query: 103 AAAPVHYASPVHYAAPVAKVIAPAHKVLVSAHHEEEYAHPKYDFAYSVADGHSGDNKSQH 162
A P A P+ + A I A V A E + + S DG + +NKS+H
Sbjct: 1542 ATGPRCVAVPMRFGATSRAFIPAAAFASVPARVESDEEEEDNSGSESGEDGAASENKSEH 1601
Query: 163 ESRDGDAVHG 172
S +G++ +G
Sbjct: 1602 GSENGESGNG 1611
>AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform b protein.
Length = 2238
Score = 31.5 bits (68), Expect = 0.50
Identities = 20/70 (28%), Positives = 31/70 (44%)
Query: 103 AAAPVHYASPVHYAAPVAKVIAPAHKVLVSAHHEEEYAHPKYDFAYSVADGHSGDNKSQH 162
A P A P+ + A I A V A E + + S DG + +NKS+H
Sbjct: 1504 ATGPRCVAVPMRFGATSRAFIPAAAFASVPARVESDEEEEDNSGSESGEDGAASENKSEH 1563
Query: 163 ESRDGDAVHG 172
S +G++ +G
Sbjct: 1564 GSENGESGNG 1573
>Z70756-11|CAI46587.1| 228|Caenorhabditis elegans Hypothetical
protein T06E4.12 protein.
Length = 228
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 101 IAAAAPVHYASPVHYAAPVAKVIAPAHKVLVSA 133
+ AAAP A+P AP A ++AP VL +A
Sbjct: 55 VLAAAPTVLAAPAPLLAPPAPLLAPPAPVLAAA 87
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.9 bits (59), Expect = 6.1
Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 3/66 (4%)
Query: 133 AHHEEEYAHPKYDFAYSVADGHSGDNKSQ---HESRDGDAVHGEYTLVEADGSVRKVEYT 189
AHH E H + + A H G ++S H S HGE+ A +
Sbjct: 417 AHHGEHGTHHGHHGEHHHAPAHHGHHESHGHGHHSPAHHGHHGEHHHAPAHHGHHGEHHH 476
Query: 190 ADDHHG 195
A HHG
Sbjct: 477 APAHHG 482
>U64852-4|AAB04967.1| 192|Caenorhabditis elegans Galectin protein
10 protein.
Length = 192
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 106 PVHYASPVHYAAPVAKVIAPAHKVLVSAHHEEEYAHPKYDFAYSVADGHSGD 157
P+H++ H + KV A + + V+ HH +Y H +Y + A G GD
Sbjct: 82 PLHHSEHFHLSI---KVHAGYYHISVNGHHLADYPH-RYPYQSVQAIGLKGD 129
>U13875-11|AAA21158.1| 1193|Caenorhabditis elegans Rna polymerase ii
(b) subunit protein2 protein.
Length = 1193
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 148 YSVADGHSGDNKSQHESRDG 167
YS+A G+ GD K H+SR G
Sbjct: 452 YSLATGNWGDQKKAHQSRAG 471
>U10333-1|AAA50224.1| 859|Caenorhabditis elegans RNA polymerase II,
second largestsubunit protein.
Length = 859
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 148 YSVADGHSGDNKSQHESRDG 167
YS+A G+ GD K H+SR G
Sbjct: 253 YSLATGNWGDQKKAHQSRAG 272
>AB038501-1|BAB11966.1| 192|Caenorhabditis elegans galectin LEC-10
protein.
Length = 192
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 106 PVHYASPVHYAAPVAKVIAPAHKVLVSAHHEEEYAHPKYDFAYSVADGHSGD 157
P+H++ H + KV A + + V+ HH +Y H +Y + A G GD
Sbjct: 82 PLHHSEHFHLSI---KVHAGYYHISVNGHHLADYPH-RYPYQSVQAIGLKGD 129
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.314 0.128 0.383
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,777,994
Number of Sequences: 27539
Number of extensions: 134027
Number of successful extensions: 368
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 354
Number of HSP's gapped (non-prelim): 16
length of query: 222
length of database: 12,573,161
effective HSP length: 79
effective length of query: 143
effective length of database: 10,397,580
effective search space: 1486853940
effective search space used: 1486853940
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 58 (27.5 bits)
- SilkBase 1999-2023 -