Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000429-TA|BGIBMGA000429-PA|IPR000618|Insect cuticle
protein
(426 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0602 + 19183549-19184919 31 1.3
06_01_0025 - 244068-244177,244279-244333,244500-244527,244621-24... 31 1.8
03_05_0701 - 26925252-26925578,26929233-26930513 31 1.8
01_06_0666 + 31040768-31041079,31041716-31041889,31041996-31042646 31 1.8
06_03_0938 - 26126669-26127115,26127197-26127619,26127727-26128047 30 3.1
02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258 29 7.1
>08_02_0602 + 19183549-19184919
Length = 456
Score = 31.5 bits (68), Expect = 1.3
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Query: 97 ATNYIAAAAPVHYASPVHYAAPVAKVITPAHKVLLSAHHEEE---YAHPKYDFTYSVADG 153
A+ +AAA P A + A V + +LLSA HE YA+ + D ADG
Sbjct: 198 ASGSVAAALP---AGVLDDACADLDVTSSNQPLLLSAEHEVVDALYANQEADAAILHADG 254
Query: 154 HSGDNKSQHESRDG 167
H ++SQ E G
Sbjct: 255 HHNQDESQREHHHG 268
Score = 30.3 bits (65), Expect = 3.1
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Query: 301 ATNYIAAAAPVHYASPVHYTAPVAKVIAPAHKVLVSAHHEEE---YAHPKYDFAYSVADG 357
A+ +AAA P A + V + +L+SA HE YA+ + D A ADG
Sbjct: 198 ASGSVAAALP---AGVLDDACADLDVTSSNQPLLLSAEHEVVDALYANQEADAAILHADG 254
Query: 358 HSGDNKSQHESRDG 371
H ++SQ E G
Sbjct: 255 HHNQDESQREHHHG 268
>06_01_0025 -
244068-244177,244279-244333,244500-244527,244621-244691,
244829-244926,245069-245186,245573-245636,245744-245808,
245893-245928,246255-246311,246422-246691
Length = 323
Score = 31.1 bits (67), Expect = 1.8
Identities = 19/53 (35%), Positives = 23/53 (43%)
Query: 101 IAAAAPVHYASPVHYAAPVAKVITPAHKVLLSAHHEEEYAHPKYDFTYSVADG 153
+AAA P YA + AAP A + P S EY H Y FT + G
Sbjct: 43 LAAAHPYGYAPWLANAAPAALLRRPVSTTFYSFDLLREYPHDPYAFTQGLLYG 95
>03_05_0701 - 26925252-26925578,26929233-26930513
Length = 535
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/61 (27%), Positives = 22/61 (36%)
Query: 360 GDNKSQHESRDGDAVHGEYTLLEADGSVRKVEYTADDHHGFNAVVSNSAPAHHVAHAGHT 419
G K Q + GDA HG S + +H A +S P+ H A A
Sbjct: 9 GGRKGQRAADGGDAAHGRPAAAAPSSSSGGAQPPVTVNHASRAAAPSSPPSPHAAAAASA 68
Query: 420 P 420
P
Sbjct: 69 P 69
>01_06_0666 + 31040768-31041079,31041716-31041889,31041996-31042646
Length = 378
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 85 SSQTILRHDQPHATNYIAAAAPVHYASPVHYAAPVAKVITPAHKVLLSAHHEEEYAHPK 143
SS+ +RH + H+++ + A P+ A P+ ++P++ P + S HHE + H K
Sbjct: 209 SSRIAIRHSRDHSSDCLTPA-PMPPA-PLSCSSPISIKQPPRLSIQRSQHHERDTRHAK 265
Score = 30.7 bits (66), Expect = 2.3
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 289 SSQTILRHDQPHATNYIAAAAPVHYASPVHYTAPVAKVIAPAHKVLVSAHHEEEYAHPK 347
SS+ +RH + H+++ + A P+ A P+ ++P++ P + S HHE + H K
Sbjct: 209 SSRIAIRHSRDHSSDCLTPA-PMPPA-PLSCSSPISIKQPPRLSIQRSQHHERDTRHAK 265
>06_03_0938 - 26126669-26127115,26127197-26127619,26127727-26128047
Length = 396
Score = 30.3 bits (65), Expect = 3.1
Identities = 34/141 (24%), Positives = 55/141 (39%), Gaps = 12/141 (8%)
Query: 296 HDQPHATNYIAAAAPVHYASPVHYTAPVAKVIAPAHKVL---VSAHHEEEYAH-PKYDFA 351
H + + ++AAAA YASP A A A +V+ + + H D +
Sbjct: 188 HHRKPSPPFVAAAAAAAYASPDQMECTSAAAAAAAKRVVREDCKPKVSKRFVHADPSDLS 247
Query: 352 YSVADGHSGDNKSQHESRDGDAVHGEY--TLLEADGSVRKVEYTADDHHGFNAVV----S 405
V DG+ Q ++D + + A +KV+ +ADD+ A +
Sbjct: 248 LVVKDGYQWRKYGQKVTKDNPCPRAYFRCSFAPACPVKKKVQRSADDNTVLVATYEGEHN 307
Query: 406 NSAPAHHVAHAGHTPVLLAHH 426
++ P HH AG A H
Sbjct: 308 HAQPPHH--DAGSKTAAAAKH 326
Score = 28.7 bits (61), Expect = 9.4
Identities = 31/146 (21%), Positives = 51/146 (34%), Gaps = 10/146 (6%)
Query: 92 HDQPHATNYIAAAAPVHYASPVHYAAPVAKVITPAHKVL---LSAHHEEEYAH-PKYDFT 147
H + + ++AAAA YASP A A +V+ + + H D +
Sbjct: 188 HHRKPSPPFVAAAAAAAYASPDQMECTSAAAAAAAKRVVREDCKPKVSKRFVHADPSDLS 247
Query: 148 YSVADGHSGDNKSQHESRDGDAVHGEY--TLLEADGSVRKVEYTADDHHGFNAVV----S 201
V DG+ Q ++D + + A +KV+ +ADD+ A +
Sbjct: 248 LVVKDGYQWRKYGQKVTKDNPCPRAYFRCSFAPACPVKKKVQRSADDNTVLVATYEGEHN 307
Query: 202 NTAPAHHIXXXXXXXXXXXXXXXPEP 227
+ P HH P P
Sbjct: 308 HAQPPHHDAGSKTAAAAKHSQHQPPP 333
>02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258
Length = 874
Score = 29.1 bits (62), Expect = 7.1
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 386 SVRKVEYTADDHHGFNAVVSNSAPA 410
SV K++ DDHHG AV + ++P+
Sbjct: 801 SVEKLDQDGDDHHGKEAVAAAASPS 825
Score = 28.7 bits (61), Expect = 9.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 182 SVRKVEYTADDHHGFNAVVSNTAPA 206
SV K++ DDHHG AV + +P+
Sbjct: 801 SVEKLDQDGDDHHGKEAVAAAASPS 825
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.128 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,582,407
Number of Sequences: 37544
Number of extensions: 416741
Number of successful extensions: 1007
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 998
Number of HSP's gapped (non-prelim): 12
length of query: 426
length of database: 14,793,348
effective HSP length: 84
effective length of query: 342
effective length of database: 11,639,652
effective search space: 3980760984
effective search space used: 3980760984
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)
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