GeneModel BLAST Result against nematostella

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000428-TA|BGIBMGA000428-PA|IPR000618|Insect cuticle
protein
         (224 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_44749| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.3  
SB_31903| Best HMM Match : Amino_oxidase (HMM E-Value=3.36312e-44)     28   5.4  
SB_26858| Best HMM Match : ANF_receptor (HMM E-Value=2.4e-15)          27   9.4  

>SB_44749| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2250

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)

Query: 147  DFAYSVADGHSGDNKSQHESRDGDAV--HGEYTLVEADGSVRKVEYTAD 193
            D  +   +   GD+  +H+  DGD+V  H +Y     D  VR  +Y  D
Sbjct: 1863 DVRHDEYNDEDGDSDVRHDDYDGDSVVRHDDYNDDNGDSDVRHDDYDGD 1911


>SB_31903| Best HMM Match : Amino_oxidase (HMM E-Value=3.36312e-44)
          Length = 1021

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 13/62 (20%), Positives = 28/62 (45%), Gaps = 2/62 (3%)

Query: 136 HHEEEYAHPKYDFAYSVADGHSGDNKSQHESRDGDAVHGEYTLVEADGSVRKVEYTADDH 195
           H + +  H K +  +   D   G    +HE  +GD  HG+  +   +G +++ + + +  
Sbjct: 333 HEKGDMQHGKKNMGHEKGDMQHGKKNMEHE--EGDMQHGKKNMGHEEGDMQQGKKSMEHE 390

Query: 196 HG 197
            G
Sbjct: 391 KG 392



 Score = 28.3 bits (60), Expect = 5.4
 Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 2/51 (3%)

Query: 136 HHEEEYAHPKYDFAYSVADGHSGDNKSQHESRDGDAVHGEYTLVEADGSVR 186
           H E +  H K +  +   D   G    +HE   GD  HG+  +   +G ++
Sbjct: 361 HEEGDMQHGKKNMGHEEGDMQQGKKSMEHEK--GDMQHGKKNMGHEEGDMQ 409


>SB_26858| Best HMM Match : ANF_receptor (HMM E-Value=2.4e-15)
          Length = 846

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 141 YAHPKYDFAYSVADGHSGDNKSQHESRDGD-AVHGEYT 177
           Y    YD  Y+VA   SG  ++ H +R  D +V GEY+
Sbjct: 681 YTAQVYDAVYAVAHATSGLYRNGHVTRGNDWSVVGEYS 718


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.314    0.128    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,555,689
Number of Sequences: 59808
Number of extensions: 142902
Number of successful extensions: 222
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 217
Number of HSP's gapped (non-prelim): 8
length of query: 224
length of database: 16,821,457
effective HSP length: 80
effective length of query: 144
effective length of database: 12,036,817
effective search space: 1733301648
effective search space used: 1733301648
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 58 (27.5 bits)