Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000425-TA|BGIBMGA000425-
PA|IPR002123|Phospholipid/glycerol acyltransferase
(310 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0498 - 24344454-24344660,24344840-24344944,24345324-243454... 149 2e-36
05_05_0387 + 24577448-24577638,24580375-24580767,24581078-245812... 144 6e-35
01_06_0932 - 33147656-33148098,33148631-33148675,33148815-331489... 131 8e-31
07_03_0696 - 20754773-20754821,20754930-20755028,20755107-207552... 32 0.51
04_04_1200 + 31690611-31690914,31690993-31691293,31691391-31696251 31 1.6
06_01_0385 - 2766467-2766562,2766596-2766754 28 8.3
05_01_0515 + 4343067-4344206,4344293-4344478,4344884-4345018,434... 28 8.3
>11_06_0498 -
24344454-24344660,24344840-24344944,24345324-24345407,
24345523-24345615,24345795-24345920,24347157-24347315,
24347398-24347475,24348316-24348375,24349433-24349555,
24349961-24350041
Length = 371
Score = 149 bits (362), Expect = 2e-36
Identities = 75/197 (38%), Positives = 115/197 (58%), Gaps = 4/197 (2%)
Query: 29 IDWLMGWQFCDGIGVLGNCKAYAKKSIQYLPPIGWMWKFSEFVFLERSFEKDKEIIKKQI 88
+DW W G LG+ A KKS ++LP IGW F+E++FLERS+ KD++ +K +
Sbjct: 61 VDW---WAGVKRSGCLGSTLAVMKKSSKFLPVIGWSMWFAEYLFLERSWAKDEKTLKWGL 117
Query: 89 SELCDYPDPVWLLLTPEGTRYTKTKHEASVNFAKEKNLPILKHHLTPRTRGFTTSLQFFR 148
L D+P P WL L EGTR+T K A+ +A + LP ++ L PRT+GF +++ R
Sbjct: 118 QRLKDFPRPFWLALFVEGTRFTPAKLLAAQEYAVSQGLPAPRNVLIPRTKGFVSAVTIMR 177
Query: 149 GKIPAIYNIQLAFEKESKTPPTLTSLLYGKPVHAHMYIERIPVENIPEDEAEATKWMHDL 208
+PAIY+ + K+S PT+ +L G+ H+ ++R + +P+ E + +KW D+
Sbjct: 178 DFVPAIYDTTVIIPKDS-PQPTMLRILKGQSSVVHVRMKRHAMSEMPKSEDDVSKWCKDI 236
Query: 209 FVTKDKMQDSFLNTGDF 225
FV KD + D L TG F
Sbjct: 237 FVAKDALLDKHLATGTF 253
>05_05_0387 +
24577448-24577638,24580375-24580767,24581078-24581208,
24581460-24581899
Length = 384
Score = 144 bits (350), Expect = 6e-35
Identities = 77/211 (36%), Positives = 114/211 (54%), Gaps = 4/211 (1%)
Query: 16 KEHGYLIMNHSYEIDWLMGWQFCDGIGVLGNCKAYAKKSIQYLPPIGWMWKFSEFVFLER 75
KE L NH E+DW+ W G L K KKS+ LP W + EF+ +ER
Sbjct: 101 KERVLLFANHRTEVDWMYLWDLALRKGRLQCIKYILKKSLMKLPIFNWAFHIIEFIPVER 160
Query: 76 SFEKDKEIIKKQISELCDYPDPVWLLLTPEGTRYTKTKHEASVNFAKEKNLPILKHHLTP 135
+E D+ +I+ ++SEL + DP+WL + PEGT YT+ K S +AKE LPIL + L P
Sbjct: 161 KWEVDEPLIRSRLSELKNPKDPLWLAVFPEGTDYTEKKCIKSQEYAKEHGLPILNNVLLP 220
Query: 136 RTRGFTTSLQFFRGKIPAIYNIQLAFEKESKTPPTLTSLLYG-KPVHAHMYIERIPVENI 194
+T+GF LQ R + ++ +I +A++ PPT +YG P H++++ I V +I
Sbjct: 221 KTKGFHCCLQELRDSMDSVCDITIAYKHR---PPTFMDNVYGIDPSEVHIHVKIIQVSDI 277
Query: 195 PEDEAEATKWMHDLFVTKDKMQDSFLNTGDF 225
P E E W+ + F K+K+ F G F
Sbjct: 278 PTSEDEVADWLIERFKLKNKLLSDFSALGHF 308
>01_06_0932 -
33147656-33148098,33148631-33148675,33148815-33148945,
33149192-33149817
Length = 414
Score = 131 bits (316), Expect = 8e-31
Identities = 77/231 (33%), Positives = 113/231 (48%), Gaps = 19/231 (8%)
Query: 11 EKFYGKEHGYLIMNHSYEIDWLMGWQFCDGIGVLGNCKAYAKKSIQYLPPIGWMWKFSEF 70
E K+ L NH E+DW+ W G LG K K S+ LP W + EF
Sbjct: 110 ESVLPKKRVLLFANHRTEVDWMYLWDLALRKGYLGYIKYILKSSLMKLPVFSWAFHIFEF 169
Query: 71 VFLERSFEKDKEIIKKQISELCDYPDPVWLLLTPEGTRYTKTKHEASVNFAKEKNLPILK 130
+ +ER +E D+ II+ ++S D DP+WL + PEGT YT+ K S +A E LPILK
Sbjct: 170 IPVERKWEIDEAIIQNKLSAFKDPRDPLWLAVFPEGTDYTEKKCIKSQEYASEHGLPILK 229
Query: 131 HHLTPRTRGFTTSLQFFRGKIPA---------------IYNIQLAFEKESKTPPTLTSLL 175
+ L P+T+GF LQ + + A IY++ +A++ P ++
Sbjct: 230 NVLLPKTKGFLCCLQELKSSLDADIRFHFCEKLEVLLLIYDVTIAYKHRL---PDFLDII 286
Query: 176 YG-KPVHAHMYIERIPVENIPEDEAEATKWMHDLFVTKDKMQDSFLNTGDF 225
YG P H++I + + +IP E E T WM + F KD++ F G F
Sbjct: 287 YGTDPSEVHIHIRTVKLCDIPTSEDEVTDWMIERFRQKDQLLSDFFMQGHF 337
>07_03_0696 -
20754773-20754821,20754930-20755028,20755107-20755226,
20755317-20755402,20756013-20756109,20756181-20756268,
20756358-20756454,20756797-20756892,20757029-20757125,
20757571-20757689,20758559-20758616,20758751-20758857
Length = 370
Score = 32.3 bits (70), Expect = 0.51
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 71 VFLERSFEKDKEIIKKQISELCDYPDPVWLLLTPEGT 107
++ R+ KD+E++ K++ + +PD LL+ PEGT
Sbjct: 205 IWFNRNDLKDREVVAKKLRDHVQHPDSNPLLIFPEGT 241
>04_04_1200 + 31690611-31690914,31690993-31691293,31691391-31696251
Length = 1821
Score = 30.7 bits (66), Expect = 1.6
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 51 AKKSIQYLPPIGWMWKFSEFVF--LERSFEKDKEIIKKQISELCDYPDPVWL-LLTPEGT 107
A K++++L + + K S F + +K + QISE C Y DP+ L+ P
Sbjct: 692 AVKAMKHLRTLVLIGKHSSLFFQSFKDVVQKGHHLRLLQISETCTYVDPLLCNLVNPAHI 751
Query: 108 RYTKT-KHEASVNFAKEKNLPIL 129
RY K K +F+K +L +L
Sbjct: 752 RYMKLHKRALPQSFSKFYHLQVL 774
>06_01_0385 - 2766467-2766562,2766596-2766754
Length = 84
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 148 RGKIPAIYNIQLAFEKESKTPPTLTSLLYGKPVHAHMYIERIPVENIPEDEAE-ATKWMH 206
+G + Y+ + E ++ TPP ++S L K V E+ PVE E+E + KW
Sbjct: 4 KGSLWHRYSTKAVAEVKASTPPYVSSALEAKRVQKGKEHEK-PVEKGKEEERKRKKKWPE 62
Query: 207 DLFV 210
L V
Sbjct: 63 TLMV 66
>05_01_0515 +
4343067-4344206,4344293-4344478,4344884-4345018,
4346652-4346753,4346973-4347068,4347146-4347238,
4347351-4347470,4347580-4347612,4347699-4347749,
4347874-4347952,4348398-4348456
Length = 697
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 155 YNIQLAFEKESKTPPTLTSLLYGKPVHAHMYIERIPVENIPEDEAEATKWMH 206
Y+ + E ++ T P ++S L K V E+ PVE E+E E +W H
Sbjct: 445 YSGKAVAEVKASTAPYVSSALEAKRVEKGKEQEK-PVEKGKEEEVEFLEWEH 495
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.322 0.138 0.429
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,908,213
Number of Sequences: 37544
Number of extensions: 360525
Number of successful extensions: 664
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 657
Number of HSP's gapped (non-prelim): 8
length of query: 310
length of database: 14,793,348
effective HSP length: 82
effective length of query: 228
effective length of database: 11,714,740
effective search space: 2670960720
effective search space used: 2670960720
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 60 (28.3 bits)
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