GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000425-TA|BGIBMGA000425-
PA|IPR002123|Phospholipid/glycerol acyltransferase
         (310 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       27   0.28 
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    24   2.0  
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    24   2.0  
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    23   2.6  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    23   2.6  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   6.0  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   6.0  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 26.6 bits (56), Expect = 0.28
 Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%)

Query: 8  DEYEKFYGKEHGYLIMNHSYEIDWLMG 34
          DE  + YGK  G++I N++ + DW +G
Sbjct: 21 DEGGRSYGKGRGFIIQNNNND-DWSVG 46


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 11/47 (23%), Positives = 26/47 (55%), Gaps = 10/47 (21%)

Query: 185 YIERIPV-ENIPEDEAEATKWMHDLFVTKDKMQDSFLNTGDFFLQSG 230
           +++ +P+ +N+PE+          L    D ++++F N GD+ ++ G
Sbjct: 214 FLKSVPIFKNLPEET---------LIKISDVLEETFYNNGDYIIRQG 251


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)

Query: 93  DYPDPVWLLLTPE 105
           DYP P W  +TPE
Sbjct: 130 DYPSPEWDTVTPE 142


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 78  EKDKEIIKKQISELCDYPDPVWLLL 102
           EK K+I  K +  L D    +W+LL
Sbjct: 80  EKQKKIADKVVQFLIDNKPEIWVLL 104


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 78  EKDKEIIKKQISELCDYPDPVWLLL 102
           EK K+I  K +  L D    +W+LL
Sbjct: 80  EKQKKIADKVVQFLIDNKPEIWVLL 104


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 6/12 (50%), Positives = 10/12 (83%)

Query: 98  VWLLLTPEGTRY 109
           VW+++ P GTR+
Sbjct: 644 VWMIIEPPGTRF 655


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 6/12 (50%), Positives = 10/12 (83%)

Query: 98  VWLLLTPEGTRY 109
           VW+++ P GTR+
Sbjct: 734 VWMIIEPPGTRF 745


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.138    0.429 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,662
Number of Sequences: 429
Number of extensions: 4497
Number of successful extensions: 17
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 7
length of query: 310
length of database: 140,377
effective HSP length: 58
effective length of query: 252
effective length of database: 115,495
effective search space: 29104740
effective search space used: 29104740
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 44 (21.8 bits)