GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000424-TA|BGIBMGA000424-PA|IPR002076|GNS1/SUR4 membrane
protein
         (185 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist mic...    26   0.61 
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    25   1.1  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    25   1.1  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    25   1.1  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   4.3  

>DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist
           michelob_x protein.
          Length = 201

 Score = 26.2 bits (55), Expect = 0.61
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 115 MHAVMFFFLFKDFYDQSYSKPKVRAKSPQP 144
           + AV+   LF+   D S S PK + + P+P
Sbjct: 126 VRAVLHDILFRHLLDTSASAPKKKKRKPKP 155


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 9/17 (52%), Positives = 12/17 (70%)

Query: 67  GPHMRKYLWWKKYLTTL 83
           GP +R+  +WKKYL  L
Sbjct: 677 GPRLRQCAFWKKYLPQL 693


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 9/17 (52%), Positives = 12/17 (70%)

Query: 67  GPHMRKYLWWKKYLTTL 83
           GP +R+  +WKKYL  L
Sbjct: 677 GPRLRQCAFWKKYLPQL 693


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 9/17 (52%), Positives = 12/17 (70%)

Query: 67  GPHMRKYLWWKKYLTTL 83
           GP +R+  +WKKYL  L
Sbjct: 563 GPRLRQCAFWKKYLPQL 579


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 2/32 (6%)

Query: 133 SKPKVRAKSPQPELE--TTEIKELTYQNGSLK 162
           ++PK  + +P PELE     I+ L  QN ++K
Sbjct: 104 AEPKAASATPAPELELLRATIQRLEEQNCAMK 135


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.330    0.141    0.469 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,453
Number of Sequences: 2123
Number of extensions: 8422
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 14
Number of HSP's gapped (non-prelim): 5
length of query: 185
length of database: 516,269
effective HSP length: 60
effective length of query: 125
effective length of database: 388,889
effective search space: 48611125
effective search space used: 48611125
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.9 bits)
S2: 45 (22.2 bits)