Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000423-TA|BGIBMGA000423-PA|IPR000771|Ketose-bisphosphate
aldolase, class-II
         (65 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91509-1|CAA62809.1|  103|Apis mellifera histone H4 protein.           21   1.6  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    20   2.1  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    20   2.1  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       20   2.8  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    19   4.9  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                19   4.9  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    19   6.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    19   6.4  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    18   8.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    18   8.5  

>X91509-1|CAA62809.1|  103|Apis mellifera histone H4 protein.
          Length = 103

 Score = 20.6 bits (41), Expect = 1.6
 Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 1/44 (2%)

Query: 11 MGVNGA-REGDIRGDNSNGGNEVREGEIGRNGELVEFEKVILEE 53
          +G  GA R   + GDN  G  +     + R G +     +I EE
Sbjct: 11 LGKGGAKRHRKVLGDNIQGITKPAIRRLARRGGVKRISGLIYEE 54


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 20.2 bits (40), Expect = 2.1
 Identities = 9/36 (25%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 11  MGVNGAREGDIRGDNSNGGNEVREGEI-GRNGELVE 45
           M  NG   G++  D+ + G++  + ++   NG+  E
Sbjct: 379 MNANGEAVGEVDEDDDDDGDDDDDDDVEAANGKPAE 414


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 20.2 bits (40), Expect = 2.1
 Identities = 9/22 (40%), Positives = 14/22 (63%)

Query: 35  GEIGRNGELVEFEKVILEEIIL 56
           G+ G  G+L+    +IL EII+
Sbjct: 255 GQFGAQGKLIVDFFMILNEIIM 276


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 19.8 bits (39), Expect = 2.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)

Query: 22  RGDNSNGGNEVREGE 36
           RG +  GG +VRE E
Sbjct: 595 RGISKFGGEDVRESE 609


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 19.0 bits (37), Expect = 4.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)

Query: 26  SNGGNEVREGEIGRNGELVEFEKV 49
           S G   +REG++G    ++E  KV
Sbjct: 124 SAGSTIIREGDVGSIVYVMEEGKV 147


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 19.0 bits (37), Expect = 4.9
 Identities = 6/12 (50%), Positives = 8/12 (66%)

Query: 20  DIRGDNSNGGNE 31
           D+    S+GGNE
Sbjct: 252 DVESSTSSGGNE 263


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 18.6 bits (36), Expect = 6.4
 Identities = 6/24 (25%), Positives = 12/24 (50%)

Query: 17  REGDIRGDNSNGGNEVREGEIGRN 40
           + G+ + DN   GN   + +  +N
Sbjct: 505 QNGNRQNDNKRNGNRQNDNQNNQN 528


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 18.6 bits (36), Expect = 6.4
 Identities = 9/28 (32%), Positives = 16/28 (57%)

Query: 33  REGEIGRNGELVEFEKVILEEIILMECN 60
           RE  I    ++ E  K++ EE++ +E N
Sbjct: 848 RETIISAAEKIAEELKIVPEELVPLEGN 875


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 18.2 bits (35), Expect = 8.5
 Identities = 6/13 (46%), Positives = 8/13 (61%)

Query: 21   IRGDNSNGGNEVR 33
            + GD   GG E+R
Sbjct: 1061 VSGDGEEGGAELR 1073


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 18.2 bits (35), Expect = 8.5
 Identities = 6/13 (46%), Positives = 8/13 (61%)

Query: 21   IRGDNSNGGNEVR 33
            + GD   GG E+R
Sbjct: 1057 VSGDGEEGGAELR 1069


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.310    0.138    0.374 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,504
Number of Sequences: 429
Number of extensions: 727
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of query: 65
length of database: 140,377
effective HSP length: 44
effective length of query: 21
effective length of database: 121,501
effective search space:  2551521
effective search space used:  2551521
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.5 bits)
S2: 35 (18.2 bits)