Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000423-TA|BGIBMGA000423-PA|IPR000771|Ketose-bisphosphate
aldolase, class-II
(65 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g17665.1 68414.m02187 expressed protein 27 1.2
At3g46380.1 68416.m05024 hypothetical protein 27 1.5
At3g10030.1 68416.m01203 aspartate/glutamate/uridylate kinase fa... 27 2.0
At5g27690.1 68418.m03321 heavy-metal-associated domain-containin... 26 2.7
At1g08550.1 68414.m00948 violaxanthin de-epoxidase precursor, pu... 26 2.7
At4g37460.1 68417.m05302 tetratricopeptide repeat (TPR)-containi... 26 3.6
At4g38630.1 68417.m05467 26S proteasome regulatory subunit S5A (... 25 4.7
At4g01900.1 68417.m00250 P II nitrogen sensing protein (GLB I) i... 25 4.7
At2g17740.1 68415.m02055 DC1 domain-containing protein 25 4.7
At1g53210.1 68414.m06031 sodium/calcium exchanger family protein... 25 4.7
At1g52780.1 68414.m05966 expressed protein 25 4.7
At5g51990.1 68418.m06452 DRE-binding protein, putative / CRT/DRE... 25 6.2
At3g59640.1 68416.m06654 glycine-rich protein 25 8.3
At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family... 25 8.3
At2g22795.1 68415.m02704 expressed protein 25 8.3
At1g50710.1 68414.m05702 expressed protein 25 8.3
At1g33980.1 68414.m04213 Smg-4/UPF3 family protein contains Pfam... 25 8.3
>At1g17665.1 68414.m02187 expressed protein
Length = 338
Score = 27.5 bits (58), Expect = 1.2
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 17 REGDIRGDNSNGGNEVREGEIG 38
++ DIRGD S G ++ EGE G
Sbjct: 127 KKSDIRGDESGGEKQLGEGEDG 148
>At3g46380.1 68416.m05024 hypothetical protein
Length = 117
Score = 27.1 bits (57), Expect = 1.5
Identities = 12/46 (26%), Positives = 22/46 (47%)
Query: 17 REGDIRGDNSNGGNEVREGEIGRNGELVEFEKVILEEIILMECNEV 62
R GD+ NS G ++ G G NG++ ++ E+ ++ V
Sbjct: 54 RSGDVDSSNSGGNDDDGSGGCGTNGDVDVVILIVSSEMTMVSAMTV 99
>At3g10030.1 68416.m01203 aspartate/glutamate/uridylate kinase
family protein low similarity to SP|Q9Z5K8 Uridylate
kinase (EC 2.7.4.-) (UK) (Uridine monophosphate kinase)
(UMP kinase) {Lactococcus lactis}; contains Pfam profile
PF00696: Amino acid kinase family
Length = 542
Score = 26.6 bits (56), Expect = 2.0
Identities = 10/39 (25%), Positives = 20/39 (51%)
Query: 8 EEEMGVNGAREGDIRGDNSNGGNEVREGEIGRNGELVEF 46
+E++G N +R G +R + E+ +G GE+ +
Sbjct: 100 DEDLGANRSRIGGVRVEKRQSQEELSDGGTTNGGEITPY 138
>At5g27690.1 68418.m03321 heavy-metal-associated domain-containing
protein very low similarity to copper homeostasis factor
from Arabidopsis thaliana [gi:3168840]; contains Pfam
heavy metal associated domain PF00403
Length = 352
Score = 26.2 bits (55), Expect = 2.7
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 4 EKVLEEEMGVNGAREGDIRGDNSNGGNEVREGEIGRNGELVEFEKVI 50
+K ++ +G + D +N+NGG +V G G G + ++V+
Sbjct: 110 KKPKKDNEETSGDEDDDENNNNNNGGGDVGGGGGGGGGNFDQVKQVV 156
>At1g08550.1 68414.m00948 violaxanthin de-epoxidase precursor,
putative (AVDE1) similar to EST gb|N37612
Length = 462
Score = 26.2 bits (55), Expect = 2.7
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 2 KFEKVLEEEMGVNGAREGDIRGDNSNGGNEVREGEIGRNGELVEFEKVILEEIILMECNE 61
+ E+ +E+E+ G E + + G NE+++ E EL + E L+E I ME +E
Sbjct: 389 EIEEEVEKEVEKVGRTEMTLFQRLAEGFNELKQDEENFVRELSKEEMEFLDE-IKMEASE 447
Query: 62 VE 63
VE
Sbjct: 448 VE 449
>At4g37460.1 68417.m05302 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515: TPR Domain
Length = 883
Score = 25.8 bits (54), Expect = 3.6
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 23 GDNSNGGNEVREGEIGRNGELVEFEKV 49
G +SNG + E+G ++V F KV
Sbjct: 163 GASSNGNSHESSSELGEQSKIVSFSKV 189
>At4g38630.1 68417.m05467 26S proteasome regulatory subunit S5A
(RPN10) identical to multiubiquitin chain binding
protein (MBP1) SP:P55034, GI:1165206
Length = 386
Score = 25.4 bits (53), Expect = 4.7
Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Query: 1 MKFEKVLEEEMGVNGAREG---DIRGDNSNGGNEVREGEIGRNGELVEFEKVILEEIILM 57
M+ E+ +E A E D GD ++ E +N E ++ + +L++ I M
Sbjct: 234 MEEERARQEAAAKKAADEAGQKDKDGDTASASQETVARTTDKNAEPMDEDSALLDQAIAM 293
Query: 58 ECNEVEM 64
+V M
Sbjct: 294 SVGDVNM 300
>At4g01900.1 68417.m00250 P II nitrogen sensing protein (GLB I)
identical to P II nitrogen sensing protein GLB I
(GI:7268574) [Arabidopsis thaliana]; similar to nitrogen
regulatory protein P-II (PII signal transducing protein)
(SP:O30794) {Nostoc punctiforme}
Length = 196
Score = 25.4 bits (53), Expect = 4.7
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 10 EMGVNGAREGDIRGDNSNGGNEVREG 35
++G+ G D+RG + GG+ R G
Sbjct: 95 KIGIRGVTVSDVRGFGAQGGSTERHG 120
>At2g17740.1 68415.m02055 DC1 domain-containing protein
Length = 248
Score = 25.4 bits (53), Expect = 4.7
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 8 EEEMGVNGAREGDIRGDNSNGGNEVREGEIGRNGELVEFEK 48
EEE G R G+ +GGN V G N EL K
Sbjct: 177 EEEKSKKGGRGRG--GEGGSGGNGVNRGRSSANSELAAMLK 215
>At1g53210.1 68414.m06031 sodium/calcium exchanger family protein /
calcium-binding EF hand family protein contains Pfam
profiles: PF01699 sodium/calcium exchanger protein,
PF00036 EF hand
Length = 585
Score = 25.4 bits (53), Expect = 4.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 13 VNGAREGDIRGDNSNGGNEVREGEI 37
V RE + GDN NG N+ GE+
Sbjct: 398 VQTKREHALLGDNENGENDEEGGEV 422
>At1g52780.1 68414.m05966 expressed protein
Length = 1059
Score = 25.4 bits (53), Expect = 4.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 1 MKFEKVLEEEMGVNGAREGDIRGD 24
+K+E+V+ E V+GAR RGD
Sbjct: 1034 VKYERVMSESEMVSGARVNGNRGD 1057
>At5g51990.1 68418.m06452 DRE-binding protein, putative /
CRT/DRE-binding factor, putative similar to DREB1C
GI:3738228 from [Arabidopsis thaliana]; contains Pfam
profile PF00847: AP2 domain
Length = 224
Score = 25.0 bits (52), Expect = 6.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 9 EEMGVNGAREGDIRGDNSNGG 29
EE G REG+ R + NGG
Sbjct: 154 EEAAGEGVREGERRAEEQNGG 174
>At3g59640.1 68416.m06654 glycine-rich protein
Length = 246
Score = 24.6 bits (51), Expect = 8.3
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 4 EKVLEEEMGVNGAREGDIRGDNSNGGNEVREGEIGRNGELVEFEKVILEEII 55
E++ +++ G R G NGGN G G +G L F L+ ++
Sbjct: 111 EQIQKKDTGGIPPRGRGGGGGGRNGGNNGSGGSSGEDGGLASFGDETLQVVL 162
>At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family
protein Common family members: At4g18570, At4g04980,
At5g61090 [Arabidopsis thaliana]; identical to cDNA
CHUP1 for actin binding protein GI:28071264
Length = 1004
Score = 24.6 bits (51), Expect = 8.3
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 23 GDNSNGGNEVREGEIGRNGELVEFEKVI 50
GD SN NE EG+ N V K++
Sbjct: 615 GDQSNESNESNEGKASENAATVTKMKLV 642
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 24.6 bits (51), Expect = 8.3
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 4 EKVLEEEMGVNGAREGDIRGDNSNGGNEVREGEIGRNGELVEFEKV 49
EK ++E+ + ARE + +GD+++ V E E + E EKV
Sbjct: 285 EKDIDEKANIEEARENNYKGDDAS-SEVVHESE-EKTSESENSEKV 328
>At1g50710.1 68414.m05702 expressed protein
Length = 423
Score = 24.6 bits (51), Expect = 8.3
Identities = 13/57 (22%), Positives = 33/57 (57%)
Query: 2 KFEKVLEEEMGVNGAREGDIRGDNSNGGNEVREGEIGRNGELVEFEKVILEEIILME 58
++ VLE+ +GV D++ ++ + NE+++ + + E + + +LE ++L+E
Sbjct: 290 EYYNVLEQILGVLIKLVKDLKLEHQHKYNEMQKTWLCKRCETMNAKLRVLENVLLLE 346
>At1g33980.1 68414.m04213 Smg-4/UPF3 family protein contains Pfam
PF03467: Smg-4/UPF3 family; similar to hUPF3B
(GI:12232324) [Homo sapiens]
Length = 482
Score = 24.6 bits (51), Expect = 8.3
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 33 REGEIGRNGELVEFEKVILEEIILMECNEVEM 64
REG I ++ + +EF KVI + + + E+++
Sbjct: 108 REGSISKDPDYLEFLKVIAQPVENLPSAEIQL 139
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.310 0.138 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,706,265
Number of Sequences: 28952
Number of extensions: 66162
Number of successful extensions: 166
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 148
Number of HSP's gapped (non-prelim): 22
length of query: 65
length of database: 12,070,560
effective HSP length: 45
effective length of query: 20
effective length of database: 10,767,720
effective search space: 215354400
effective search space used: 215354400
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 51 (24.6 bits)
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