GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000423-TA|BGIBMGA000423-PA|IPR000771|Ketose-bisphosphate
aldolase, class-II
         (65 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    35   8e-05
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    23   0.26 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    19   4.2  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           19   5.6  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    18   9.8  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    18   9.8  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    18   9.8  

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 34.7 bits (76), Expect = 8e-05
 Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 6/46 (13%)

Query: 16  AREGDIRGDNSNGGNE----VREGEIGRNGELVEF--EKVILEEII 55
           AR+G ++ DNSN G E    V E EIG+N + VE   EK++ + ++
Sbjct: 230 ARKGKLKHDNSNEGGEGFATVEESEIGKNTKQVELTDEKIVAQALL 275


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.0 bits (47), Expect = 0.26
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)

Query: 15  GAREGDIRGDNSNGGNEVREGE--IGRNGELVE--FEKVILEEIILMECNEVEM 64
           G R G   GD  +GG E ++ E  I    E VE  F   I   +  M+ +E+E+
Sbjct: 93  GGRGGGRDGDRGDGGGEEKKREFYIPPEVENVEDLFTSGITTGVNFMKLDEIEV 146



 Score = 19.0 bits (37), Expect = 4.2
 Identities = 8/27 (29%), Positives = 13/27 (48%)

Query: 28  GGNEVREGEIGRNGELVEFEKVILEEI 54
           GG ++R  + GR  +      V  EE+
Sbjct: 553 GGRDIRGDDFGRGQDFSNAAAVQEEEV 579


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 19.0 bits (37), Expect = 4.2
 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)

Query: 32  VREGEIGRNGELVEFEKV-ILEEII 55
           V  G+ G+N  L EFE + +L  II
Sbjct: 323 VVRGDNGQNIPLTEFEGIDVLGNII 347


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 18.6 bits (36), Expect = 5.6
 Identities = 7/19 (36%), Positives = 10/19 (52%)

Query: 24  DNSNGGNEVREGEIGRNGE 42
           DN N  +   +GE  RN +
Sbjct: 395 DNRNNTSSRAQGETSRNSK 413


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
          3-monooxygenase protein.
          Length = 290

 Score = 17.8 bits (34), Expect = 9.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)

Query: 44 VEFEKVILEEIILME 58
          V  EK+ILE  I M+
Sbjct: 67 VGIEKIILESAIPMK 81


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
          3-monooxygenase protein.
          Length = 445

 Score = 17.8 bits (34), Expect = 9.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)

Query: 44 VEFEKVILEEIILME 58
          V  EK+ILE  I M+
Sbjct: 67 VGIEKIILESAIPMK 81


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
          3-monooxygenase protein.
          Length = 445

 Score = 17.8 bits (34), Expect = 9.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)

Query: 44 VEFEKVILEEIILME 58
          V  EK+ILE  I M+
Sbjct: 67 VGIEKIILESAIPMK 81


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.310    0.138    0.374 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,868
Number of Sequences: 317
Number of extensions: 434
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 65
length of database: 114,650
effective HSP length: 43
effective length of query: 22
effective length of database: 101,019
effective search space:  2222418
effective search space used:  2222418
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.1 bits)
S2: 34 (17.8 bits)