Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000423-TA|BGIBMGA000423-PA|IPR000771|Ketose-bisphosphate
aldolase, class-II
(65 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC12G12.03 |cip2||RNA-binding protein Cip2|Schizosaccharomyces... 26 0.71
SPCC1259.14c |meu27||S. pombe specific UPF0300 family protein 5|... 25 1.6
SPAC24C9.05c |mug70||conserved protein |Schizosaccharomyces pomb... 25 1.6
SPCC548.05c |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 24 2.9
SPBC13G1.09 |||bystin-family protein|Schizosaccharomyces pombe|c... 23 3.8
SPAC16A10.06c |nse2||Smc5-6 complex non-SMC subunit 2 |Schizosac... 23 3.8
SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces po... 23 5.0
SPAC186.05c |||human TMEM165 homolog|Schizosaccharomyces pombe|c... 23 6.6
SPBC336.10c |tif512||translation initiation factor|Schizosacchar... 23 6.6
SPBC18H10.03 |tif35||translation initiation factor eIF3g|Schizos... 22 8.7
SPAC26H5.10c |tif51||translation initiation factor eIF5A|Schizos... 22 8.7
>SPAC12G12.03 |cip2||RNA-binding protein Cip2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 576
Score = 25.8 bits (54), Expect = 0.71
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 13 VNGAREGDIRGDNSNGGNEVREGEIGRN 40
+NGA++ ++RG N GG+ E GR+
Sbjct: 53 LNGAQDEEMRGLNIPGGSGYLENRYGRD 80
>SPCC1259.14c |meu27||S. pombe specific UPF0300 family protein
5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 736
Score = 24.6 bits (51), Expect = 1.6
Identities = 12/23 (52%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Query: 40 NGELVE-FEKVILEEIILMECNE 61
N +L+E FE+VI EE+ L++ NE
Sbjct: 689 NEDLLESFERVISEELSLLKSNE 711
>SPAC24C9.05c |mug70||conserved protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 730
Score = 24.6 bits (51), Expect = 1.6
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 4 EKVLEEEMGVNGAREGDIRGDNSNGGNEVREGEIGRNGELVE 45
E+ EEE V E D + SNG + ++ +G + E+VE
Sbjct: 379 EQTPEEEEEVFDQAENDAGIEPSNGFEDQQQQLLGNSNEVVE 420
>SPCC548.05c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 468
Score = 23.8 bits (49), Expect = 2.9
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 12 GVNGAREGDIRGDNSNGGN 30
G N + + GDN+ GGN
Sbjct: 228 GENAESDSSLNGDNTRGGN 246
>SPBC13G1.09 |||bystin-family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 449
Score = 23.4 bits (48), Expect = 3.8
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 38 GRNGELVEFEKVILEEIILMECNEVE 63
G G+L E + L ++I+ + NE E
Sbjct: 144 GEEGDLTEEKTTSLSDLIMQKINEAE 169
>SPAC16A10.06c |nse2||Smc5-6 complex non-SMC subunit 2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 250
Score = 23.4 bits (48), Expect = 3.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 35 GEIGRNGELVEFEKVILEE 53
G+ G GE +EF+K I E
Sbjct: 122 GKYGTQGEYIEFKKTIWHE 140
>SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 23.0 bits (47), Expect = 5.0
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 4 EKVLEEEMGVNGAREGDIRGDNSNGGNEVREGE 36
E+ E++ +G +GD G+N G+E E E
Sbjct: 199 EEEEEDDGDGDGEGDGDGEGENDGKGSEEEEEE 231
>SPAC186.05c |||human TMEM165 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 262
Score = 22.6 bits (46), Expect = 6.6
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 31 EVREGEIGRNGELVEFEKVILEEIILMECNEVEMP 65
EVRE + E + EK+I+ E + + E+ +P
Sbjct: 111 EVRESQQSLENEFDKVEKIIVNEEDMKKTLELGLP 145
>SPBC336.10c |tif512||translation initiation
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 157
Score = 22.6 bits (46), Expect = 6.6
Identities = 13/46 (28%), Positives = 20/46 (43%)
Query: 11 MGVNGAREGDIRGDNSNGGNEVREGEIGRNGELVEFEKVILEEIIL 56
M +G + D+R GNE+ EG ++ + EEI L
Sbjct: 104 MTTDGTTKDDVRLPEGELGNEIEEGFEEGKDLIITVVSAMGEEIAL 149
>SPBC18H10.03 |tif35||translation initiation factor
eIF3g|Schizosaccharomyces pombe|chr 2|||Manual
Length = 282
Score = 22.2 bits (45), Expect = 8.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 24 DNSNGGNEVREGEIGRNGELVEFEKVILEEII 55
DN +G + E I NG+ V+ +VI + +I
Sbjct: 26 DNPDGTKTMIEFRIDDNGKKVKVTRVIRKTVI 57
>SPAC26H5.10c |tif51||translation initiation factor
eIF5A|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 22.2 bits (45), Expect = 8.7
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 11 MGVNGAREGDIRGDNSNGGNEVREG 35
M +G + D+R GNE+ EG
Sbjct: 104 MTTDGTTKDDVRLPEGELGNEIEEG 128
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.310 0.138 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 292,291
Number of Sequences: 5004
Number of extensions: 9812
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 11
length of query: 65
length of database: 2,362,478
effective HSP length: 45
effective length of query: 20
effective length of database: 2,137,298
effective search space: 42745960
effective search space used: 42745960
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 45 (22.2 bits)
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