Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000423-TA|BGIBMGA000423-PA|IPR000771|Ketose-bisphosphate
aldolase, class-II
(65 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34084| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.70
SB_47302| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.1
SB_10999| Best HMM Match : GATase_2 (HMM E-Value=4e-05) 27 2.8
SB_17847| Best HMM Match : Glyco_hydro_10 (HMM E-Value=0.00078) 26 3.7
SB_54200| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 3.7
SB_52883| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 3.7
SB_22167| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 3.7
SB_21666| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.9
SB_18117| Best HMM Match : rve (HMM E-Value=1.7e-29) 26 4.9
SB_23144| Best HMM Match : Biotin_lipoyl (HMM E-Value=9.8) 25 6.5
SB_55031| Best HMM Match : GRP (HMM E-Value=5.3) 25 6.5
SB_17317| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 6.5
SB_12423| Best HMM Match : Glypican (HMM E-Value=1.00053e-42) 25 6.5
SB_51503| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.6
SB_10312| Best HMM Match : MpPF2 (HMM E-Value=0.26) 25 8.6
SB_23371| Best HMM Match : SRCR (HMM E-Value=0) 25 8.6
>SB_34084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 261
Score = 28.7 bits (61), Expect = 0.70
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 1 MKFEKVLEEEMGVNGAREGDIRGDNSNGGNEVREGEIGRN 40
M +KV E++MGV+ E D+ G + G N++ E ++G +
Sbjct: 161 MGVDKVTEDDMGVDKVSEDDM-GVDKVGENDMGEDKVGED 199
Score = 27.9 bits (59), Expect = 1.2
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Query: 1 MKFEKVLEEEMGVNGAREGDIR----GDNSNGGNEVREGEIG 38
M +KV E+E+GV+ E DI G+++ G ++V E +IG
Sbjct: 11 MGVDKVTEDEIGVDKVDEDDIGVDKVGEHNMGVDKVSEDDIG 52
>SB_47302| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 280
Score = 27.1 bits (57), Expect = 2.1
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 6 VLEEEMGVNGAREGDIRGDNSNGGNEVREGEIGRNGE 42
+LE + G EGD D+ GGNE + NG+
Sbjct: 47 ILENNVDNKGGSEGDNPDDDYQGGNEKDDDNDDINGD 83
>SB_10999| Best HMM Match : GATase_2 (HMM E-Value=4e-05)
Length = 341
Score = 26.6 bits (56), Expect = 2.8
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 4 EKVLEEEMGVNGAREGDIRGDNSNGGNEVREGEIGRNGE 42
E +E E + G E +I G+N G EGE R GE
Sbjct: 103 ENEIEGENEIEG--ENEIEGENEREGENEIEGENEREGE 139
Score = 26.2 bits (55), Expect = 3.7
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 4 EKVLEEEMGVNGAREGD--IRGDNSNGGNEVREGEIGRNGE 42
E+ E E+ REG+ I G+N G EGE R GE
Sbjct: 33 EREGENEIEGENEREGENEIEGENEREGENEIEGENEREGE 73
Score = 26.2 bits (55), Expect = 3.7
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 4 EKVLEEEMGVNGAREGD--IRGDNSNGGNEVREGEIGRNGE 42
E+ E E+ REG+ I G+N G REGE GE
Sbjct: 45 EREGENEIEGENEREGENEIEGENEREGENEREGENEIEGE 85
Score = 25.0 bits (52), Expect = 8.6
Identities = 15/39 (38%), Positives = 17/39 (43%)
Query: 4 EKVLEEEMGVNGAREGDIRGDNSNGGNEVREGEIGRNGE 42
EK E E E +I G+N G REGE GE
Sbjct: 5 EKTNEIEGENEREGENEIEGENEREGENEREGENEIEGE 43
Score = 25.0 bits (52), Expect = 8.6
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 8 EEEMGVNGAREGD--IRGDNSNGGNEVREGEIGRNGE 42
E E REG+ I G+N G EGE R GE
Sbjct: 25 ENEREGENEREGENEIEGENEREGENEIEGENEREGE 61
Score = 25.0 bits (52), Expect = 8.6
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 8 EEEMGVNGAREGD--IRGDNSNGGNEVREGEIGRNGE 42
E E REG+ I G+N G EGE R GE
Sbjct: 67 ENEREGENEREGENEIEGENEREGENEIEGENEREGE 103
>SB_17847| Best HMM Match : Glyco_hydro_10 (HMM E-Value=0.00078)
Length = 182
Score = 26.2 bits (55), Expect = 3.7
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 13 VNGAREGDIRGDNSNGGNEVREGEIGRNGELVEFEKVILEE 53
+N +G D GGN++RE I R EL K+ L E
Sbjct: 8 INEMLQGSFFADRL-GGNKIREWMINRTAELDPKAKLFLNE 47
>SB_54200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 996
Score = 26.2 bits (55), Expect = 3.7
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 2 KFEKVLEEEMGVNGAREGDIRGDNSNGGNEVREGEIGRNGELVEFEK 48
K EK ++ G E D G++ GG++ +E + G+N E E EK
Sbjct: 840 KEEKGDKDGEGKERKDEKDKNGEDGKGGDKDKEDKEGKNKEDNEKEK 886
>SB_52883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1434
Score = 26.2 bits (55), Expect = 3.7
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 7 LEEEMGVNGAREGDIRGDNSNGGNEVREGEIGRNGE 42
L+ E ++G+ E G++ G GE G +GE
Sbjct: 652 LKAESDIDGSGESGESGESGKSGESGESGESGESGE 687
>SB_22167| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1612
Score = 26.2 bits (55), Expect = 3.7
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 14 NGAREGDIRGDNSNGGNEVREGEIGRNGELVEFEKVILEEI 54
+ +E ++ D+S G N +RE + L E E + E++
Sbjct: 538 DAGKETTVQNDSSEGRNPLREVDPNNPNNLSEIESPVYEDL 578
>SB_21666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 25.8 bits (54), Expect = 4.9
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 6 VLEEEMGVNGAREGDIRGDNSNGGNEVREGEIGRNGELVEFEKV 49
VLE + N A+ +RG++ +E+++G +GR EL++ V
Sbjct: 215 VLESRVRQNSAKVTTVRGESGAQFHELQQG-LGRVNELLKMRFV 257
>SB_18117| Best HMM Match : rve (HMM E-Value=1.7e-29)
Length = 1544
Score = 25.8 bits (54), Expect = 4.9
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 14 NGAREGDIRGDNSNGGNEVREGEIGRNGEL 43
+G+ +GD D SN G++V +G+ +G +
Sbjct: 85 DGSSDGDDVSDGSNDGDDVSDGDDVSDGSI 114
Score = 25.0 bits (52), Expect = 8.6
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 14 NGAREGDIRGDNSNGGNEVREGEIGRNGE 42
+G+ +GD D SN G++V +G+ +G+
Sbjct: 111 DGSIDGDDVSDGSNDGDDVSDGDDVSDGD 139
>SB_23144| Best HMM Match : Biotin_lipoyl (HMM E-Value=9.8)
Length = 929
Score = 25.4 bits (53), Expect = 6.5
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 14 NGAREGDIRGDNSNGGNEVREGEI 37
NGA GD D ++ G++V +G++
Sbjct: 401 NGASNGDDVSDGASDGDDVSDGDV 424
>SB_55031| Best HMM Match : GRP (HMM E-Value=5.3)
Length = 487
Score = 25.4 bits (53), Expect = 6.5
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 18 EGDIRGDNSNGGNEVREGEIGRNGELVEFE 47
+GD D+ NG + G+ G NG+L ++
Sbjct: 303 DGDEDVDDDNGDGDYEGGDDGMNGDLGNYQ 332
>SB_17317| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 25.4 bits (53), Expect = 6.5
Identities = 8/23 (34%), Positives = 17/23 (73%)
Query: 20 DIRGDNSNGGNEVREGEIGRNGE 42
D +GD+ +GG++ + G+ G+ G+
Sbjct: 228 DFKGDSGDGGSDGKAGKEGKAGD 250
>SB_12423| Best HMM Match : Glypican (HMM E-Value=1.00053e-42)
Length = 737
Score = 25.4 bits (53), Expect = 6.5
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Query: 4 EKVLEEEMGVNGAREGDIRGDNSNGGNEVREG 35
E++LE G +G+ G GDNS GNE+ EG
Sbjct: 647 EEILEGNGG-SGSGSGSGSGDNS--GNEIDEG 675
>SB_51503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 25.0 bits (52), Expect = 8.6
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 12 GVNGAREGDIRGDNSNGGNEVREGEIGRNGELVEFEKVILEEIILM 57
G++ GD GD S+GG + + G N + E + VI + L+
Sbjct: 279 GIDDVDSGDNDGDGSDGGGDDNGDDDGDNDD-GETQSVIANRVKLV 323
>SB_10312| Best HMM Match : MpPF2 (HMM E-Value=0.26)
Length = 522
Score = 25.0 bits (52), Expect = 8.6
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 36 EIGRNGELVEFEKVILEEIILMECNEVE 63
E+ G+ E EK LEEI+L EVE
Sbjct: 75 EVRMKGDADEAEKTALEEIVLNLKTEVE 102
>SB_23371| Best HMM Match : SRCR (HMM E-Value=0)
Length = 345
Score = 25.0 bits (52), Expect = 8.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 18 EGDIRGDNSNGGNEVREGEIGRNGE 42
+GD GD+ NGG+ G+ G G+
Sbjct: 141 DGDGGGDDGNGGDNNGGGDDGNGGD 165
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.310 0.138 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,161,187
Number of Sequences: 59808
Number of extensions: 77408
Number of successful extensions: 261
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 194
Number of HSP's gapped (non-prelim): 62
length of query: 65
length of database: 16,821,457
effective HSP length: 44
effective length of query: 21
effective length of database: 14,189,905
effective search space: 297988005
effective search space used: 297988005
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 52 (25.0 bits)
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