Silkworm BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000422-TA|BGIBMGA000422-PA|IPR002076|GNS1/SUR4 membrane
protein
         (343 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    29   0.25 
AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposa...    27   1.0  
AY146747-1|AAO12062.1|  288|Anopheles gambiae odorant-binding pr...    24   5.4  
AJ618931-1|CAF02009.1|  288|Anopheles gambiae odorant-binding pr...    24   5.4  
AY193727-1|AAO24698.1|  492|Anopheles gambiae cytochrome P450 pr...    23   9.4  

>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 28.7 bits (61), Expect = 0.25
 Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 13/68 (19%)

Query: 71  LVDYSRSPMAMRMANTCW-WYYFSKFTEFMDTLFFVLRKKNEHVSTLHVIHHGIMPMSVW 129
           ++D+ R+ + +R  N+CW W    KF ++ D       K  E++  LH++++  M   VW
Sbjct: 507 ILDFLRA-LFVRYMNSCWCWDLEKKFPKYGDF------KIAENI--LHLVNNQGM---VW 554

Query: 130 FGLKFAPG 137
            G+ F+PG
Sbjct: 555 MGMFFSPG 562


>AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposase
           protein.
          Length = 336

 Score = 26.6 bits (56), Expect = 1.0
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 3/35 (8%)

Query: 188 IFSHQLQVLFRP---SCQYPRVFVYWIAMHGFLFL 219
           I SH   V+F P   SC Y +V   W A  G LF+
Sbjct: 227 IRSHDHPVMFWPDLASCHYSKVVREWYAEKGVLFV 261


>AY146747-1|AAO12062.1|  288|Anopheles gambiae odorant-binding
           protein AgamOBP42 protein.
          Length = 288

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query: 223 SDFYKARYTTAERKSKAQNGLC 244
           SD+Y   Y   ERK+   + LC
Sbjct: 101 SDYYNRTYRCIERKAPVDDDLC 122


>AJ618931-1|CAF02009.1|  288|Anopheles gambiae odorant-binding
           protein OBPjj83d protein.
          Length = 288

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query: 223 SDFYKARYTTAERKSKAQNGLC 244
           SD+Y   Y   ERK+   + LC
Sbjct: 101 SDYYNRTYRCIERKAPVDDDLC 122


>AY193727-1|AAO24698.1|  492|Anopheles gambiae cytochrome P450
           protein.
          Length = 492

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 13/38 (34%), Positives = 18/38 (47%)

Query: 264 EMGSEVPSSYASSGADALSFDVNKTERDTQIISFTVNK 301
           E GSE   S     A+   F +   E  T  ISFT+++
Sbjct: 277 ENGSEKALSIEQCAANVFLFYIAGAETSTATISFTLHE 314


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.328    0.137    0.448 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 350,050
Number of Sequences: 2123
Number of extensions: 13649
Number of successful extensions: 23
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 20
Number of HSP's gapped (non-prelim): 5
length of query: 343
length of database: 516,269
effective HSP length: 64
effective length of query: 279
effective length of database: 380,397
effective search space: 106130763
effective search space used: 106130763
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 48 (23.4 bits)