Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000422-TA|BGIBMGA000422-PA|IPR002076|GNS1/SUR4 membrane
protein
(343 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81058-5|CAB02921.1| 274|Caenorhabditis elegans Hypothetical pr... 87 1e-17
U61954-11|AAK29807.1| 274|Caenorhabditis elegans Fatty acid elo... 79 3e-15
Z19154-4|CAA79555.1| 291|Caenorhabditis elegans Hypothetical pr... 75 7e-14
Z68749-3|CAA92958.1| 288|Caenorhabditis elegans Hypothetical pr... 69 5e-12
AF244356-1|AAF70462.1| 288|Caenorhabditis elegans long chain po... 69 5e-12
AL132949-2|CAB61069.1| 286|Caenorhabditis elegans Hypothetical ... 65 6e-11
Z68749-1|CAA92960.2| 309|Caenorhabditis elegans Hypothetical pr... 65 8e-11
U41011-5|AAA82288.2| 320|Caenorhabditis elegans Fatty acid elon... 60 2e-09
U61954-8|AAK29808.1| 286|Caenorhabditis elegans Fatty acid elon... 45 7e-05
U41109-11|AAB37037.2| 204|Caenorhabditis elegans Hypothetical p... 31 1.6
AL117202-24|CAD27612.1| 565|Caenorhabditis elegans Hypothetical... 30 2.7
Z66514-3|CAA91343.1| 854|Caenorhabditis elegans Hypothetical pr... 29 3.6
U97189-2|AAC48165.2| 336|Caenorhabditis elegans Serpentine rece... 29 3.6
U46673-1|AAC48153.4| 1003|Caenorhabditis elegans Insulin recepto... 29 3.6
AY342006-1|AAQ22724.1| 854|Caenorhabditis elegans TRP-3 channel... 29 3.6
AY064245-1|AAL40865.1| 1003|Caenorhabditis elegans insulin recep... 29 3.6
AJ276029-1|CAC81656.1| 854|Caenorhabditis elegans TRP homologou... 29 3.6
AF039716-3|AAB96736.1| 515|Caenorhabditis elegans Hypothetical ... 29 3.6
Z81046-2|CAB02824.1| 295|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z72503-9|CAA96599.2| 370|Caenorhabditis elegans Hypothetical pr... 29 4.8
>Z81058-5|CAB02921.1| 274|Caenorhabditis elegans Hypothetical
protein F11E6.5 protein.
Length = 274
Score = 87.4 bits (207), Expect = 1e-17
Identities = 72/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)
Query: 22 GPKLMANRKPFELRNILVVYNMAQTIFSAWIFYEYLMSGWWGHYDFRCQLVDYSRSPMAM 81
G KLMA+RKPF+L+N L ++N ++FS Y+ L+ +G + + Y ++
Sbjct: 50 GQKLMAHRKPFDLQNTLALWNFGFSLFSGIAAYK-LIPELFGVFMKDGFVASYCQNENYY 108
Query: 82 RMANTCWW---YYFSKFTEFMDTLFFVLRKKNEHVSTLHVIHHGIMPMSVWFGLKFAPGG 138
A+T +W + SK E DT+F VLRKK V +H HH + V+ + ++
Sbjct: 109 TDASTGFWGWAFVMSKAPELGDTMFLVLRKK--PVIFMHWYHHAL--TFVYAVVTYSEHQ 164
Query: 139 HSTFFAL-LNTFVHIVMYFYYMVAAMGPKYQKYIWWKKYLTAFQMVQFVL---IFSHQLQ 194
++L LN VH VMYFY+ V A+ + + + K++T Q+VQFV+ IF H
Sbjct: 165 AWARWSLALNLAVHTVMYFYFAVRALNIQTPRPV--AKFITTIQIVQFVISCYIFGH--L 220
Query: 195 VLFRPSCQYPRVFVYW--IAMHGFL---FLFLFSDFYKARYTTAERKSK 238
V + + P V W +++ G + +LFLF+ F+ Y +K
Sbjct: 221 VFIKSADSVPGCAVSWNVLSIGGLMYISYLFLFAKFFYKAYIQKRSPTK 269
>U61954-11|AAK29807.1| 274|Caenorhabditis elegans Fatty acid
elongation protein 6 protein.
Length = 274
Score = 79.4 bits (187), Expect = 3e-15
Identities = 71/233 (30%), Positives = 106/233 (45%), Gaps = 27/233 (11%)
Query: 12 VCYAYCAKELGPK-LMANRKPFELRNILVVYNMAQTIFSAW--------IFYEYLMSGWW 62
+ AY G K +M NRKPF+L L ++N IFS + +E+ G++
Sbjct: 36 ISMAYVVVIFGLKAVMTNRKPFDLTGPLNLWNAGLAIFSTLGSLATTFGLLHEFFSRGFF 95
Query: 63 GHYDFRCQLVDYSRSPMAMRMANTCWWYYFSKFTEFMDTLFFVLRKKNEHVSTLHVIHHG 122
Y + D+ M W + SK EF DTLF +LRKK + LH HH
Sbjct: 96 ESY---IHIGDFYNGLSGM----FTWLFVLSKVAEFGDTLFIILRKKP--LMFLHWYHH- 145
Query: 123 IMPMSVWFGLKFAPGGHSTFFALLNTFVHIVMYFYYMVAAMGPKYQKYIWWKKYLTAFQM 182
++ M+ F A G +T+ +N VH +MY YYM+ + G K W K +T Q+
Sbjct: 146 VLTMNYAFMSFEANLGFNTWITWMNFSVHSIMYGYYMLRSFGVKVP--AWIAKNITTMQI 203
Query: 183 VQFVL---IFSH--QLQVLFRPSCQYPRVFVYWIAMHGFLFLFLFSDFYKARY 230
+QFV+ I H L V + P + + + M ++ LF +FY Y
Sbjct: 204 LQFVITHFILFHVGYLAVTGQSVDSTPGYYWFCLLME-ISYVVLFGNFYYQSY 255
>Z19154-4|CAA79555.1| 291|Caenorhabditis elegans Hypothetical
protein C40H1.4 protein.
Length = 291
Score = 74.9 bits (176), Expect = 7e-14
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 15/224 (6%)
Query: 24 KLMANRKPFELRNILVVYNMAQTIFSAWIFYEYLMSGWWGHY-DFRCQLVDYSRSPMAMR 82
K M NRKPF L+ L+++N A FS + + Y + + + YS +P +
Sbjct: 71 KFMENRKPFTLKYPLILWNGALAAFSIIATLRFSIDPLRSLYAEGFYKTLCYSCNPTDVA 130
Query: 83 MANTCWWYYFSKFTEFMDTLFFVLRKKNEHVSTLHVIHHG-IMPMSVWFGLKFAPGGHST 141
A + + SK E DT+F +LRK+ + LH HH ++ +V G + G
Sbjct: 131 -AFWSFAFALSKIVELGDTMFIILRKRP--LIFLHYYHHAAVLIYTVHSGAEHTAAGR-- 185
Query: 142 FFALLNTFVHIVMYFYYMVAAMGPKYQKYIWWKKYLTAFQMVQF-----VLIFSHQLQVL 196
F+ L+N F H +MY YY V+AMG + K W +T Q Q + ++++
Sbjct: 186 FYILMNYFAHSLMYTYYTVSAMGYRLPK--WVSMTVTTVQTTQMLAGVGITWMVYKVKTE 243
Query: 197 FRPSCQYPRVFVYWIAMHGFLFLFLFSDFY-KARYTTAERKSKA 239
++ CQ +Y + F LF F+ KA + +KSK+
Sbjct: 244 YKLPCQQSVANLYLAFVIYVTFAILFIQFFVKAYIIKSSKKSKS 287
>Z68749-3|CAA92958.1| 288|Caenorhabditis elegans Hypothetical
protein F56H11.4 protein.
Length = 288
Score = 68.9 bits (161), Expect = 5e-12
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 16/232 (6%)
Query: 16 YCAKELGPK-LMANRKPFELRNILVVYNMAQTIFSAWIFYEYLMSGWWGHYDFRCQLVDY 74
Y G K M NR+PF+L L ++N FS + + ++G + + Y
Sbjct: 54 YMVVVFGTKWFMRNRQPFQLTIPLNIWNFILAAFSIAGAVK-MTPEFFGTIANKGIVASY 112
Query: 75 SRSPMAMRMANTCWWYYF--SKFTEFMDTLFFVLRKKNEHVSTLHVIHHGIMPMSVWFGL 132
+ + N W + F SK E +DT+F VLRK+ + LH HH + + W+
Sbjct: 113 CKVFDFTKGENGYWVWLFMASKLFELVDTIFLVLRKR--PLMFLHWYHHILTMIYAWYSH 170
Query: 133 KFAPGGHSTFFALLNTFVHIVMYFYYMVAAMGPKYQKYIWWKKYLTAFQMVQFVL---IF 189
P G + + LN VH MY YY + +M + +I + +T+ Q+VQF++ +
Sbjct: 171 PLTP-GFNRYGIYLNFVVHAFMYSYYFLRSMKIRVPGFI--AQAITSLQIVQFIISCAVL 227
Query: 190 SH--QLQVLFRPSCQY-PRVFVYWIAMHGFLFLFLFSDFYKARYTTAERKSK 238
+H L +C + P VF + M +L LF +F+ Y K K
Sbjct: 228 AHLGYLMHFTNANCDFEPSVFKLAVFM-DTTYLALFVNFFLQSYVLRGGKDK 278
>AF244356-1|AAF70462.1| 288|Caenorhabditis elegans long chain
polyunsaturated fattyacid elongation enzyme protein.
Length = 288
Score = 68.9 bits (161), Expect = 5e-12
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 16/232 (6%)
Query: 16 YCAKELGPK-LMANRKPFELRNILVVYNMAQTIFSAWIFYEYLMSGWWGHYDFRCQLVDY 74
Y G K M NR+PF+L L ++N FS + + ++G + + Y
Sbjct: 54 YMVVVFGTKWFMRNRQPFQLTIPLNIWNFILAAFSIAGAVK-MTPEFFGTIANKGIVASY 112
Query: 75 SRSPMAMRMANTCWWYYF--SKFTEFMDTLFFVLRKKNEHVSTLHVIHHGIMPMSVWFGL 132
+ + N W + F SK E +DT+F VLRK+ + LH HH + + W+
Sbjct: 113 CKVFDFTKGENGYWVWLFMASKLFELVDTIFLVLRKR--PLMFLHWYHHILTMIYAWYSH 170
Query: 133 KFAPGGHSTFFALLNTFVHIVMYFYYMVAAMGPKYQKYIWWKKYLTAFQMVQFVL---IF 189
P G + + LN VH MY YY + +M + +I + +T+ Q+VQF++ +
Sbjct: 171 PLTP-GFNRYGIYLNFVVHAFMYSYYFLRSMKIRVPGFI--AQAITSLQIVQFIISCAVL 227
Query: 190 SH--QLQVLFRPSCQY-PRVFVYWIAMHGFLFLFLFSDFYKARYTTAERKSK 238
+H L +C + P VF + M +L LF +F+ Y K K
Sbjct: 228 AHLGYLMHFTNANCDFEPSVFKLAVFM-DTTYLALFVNFFLQSYVLRGGKDK 278
>AL132949-2|CAB61069.1| 286|Caenorhabditis elegans Hypothetical
protein Y53F4B.2 protein.
Length = 286
Score = 65.3 bits (152), Expect = 6e-11
Identities = 70/232 (30%), Positives = 107/232 (46%), Gaps = 27/232 (11%)
Query: 18 AKELGPKLMANRKPFELRNILVVYNMAQTIFS---AWIF-YEYLMSGWW-GHYDFRCQLV 72
A L + M +RKP +R +L+ +N +FS W F E+ + + G D C V
Sbjct: 62 ATNLLQRYMESRKPKSMRPLLLAWNGFLAVFSIMGTWRFGIEFYDAVFRRGFIDSICLAV 121
Query: 73 DYSRSPMAMRMANTCWWYYFSKFTEFMDTLFFVLRKKNEHVSTLHVIHHGIMPMSVWFGL 132
+ RSP A C + SK EF DT+F VLRK+ V LH HH ++ + W
Sbjct: 122 N-PRSPSAFW---ACM-FALSKIAEFGDTMFLVLRKRP--VIFLHWYHHAVVLILSWHAA 174
Query: 133 --KFAPGGHSTFFALLNTFVHIVMYFYYMVAAMGPKYQKYIWWKKYLTAFQMVQFVLIFS 190
APG +F +N VH +MY YY + ++G + K + +T Q +Q ++ S
Sbjct: 175 IELTAPG---RWFIFMNYLVHSIMYTYYAITSIGYRLPKIV--SMTVTFLQTLQMLIGVS 229
Query: 191 HQLQVLF----RPSCQ--YPRVFVYWIAMHGFLFLFLFSDFYKARYTTAERK 236
VL+ CQ Y + + + ++ FL LFS F+ Y + K
Sbjct: 230 ISCIVLYLKLNGEMCQQSYDNLALSF-GIYA-SFLVLFSSFFNNAYLVKKDK 279
>Z68749-1|CAA92960.2| 309|Caenorhabditis elegans Hypothetical
protein F56H11.3 protein.
Length = 309
Score = 64.9 bits (151), Expect = 8e-11
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 23/230 (10%)
Query: 24 KLMANRKPFELRNILVVYNMAQTIFS---AWIFYEYLMSG--WWGHYDFRCQLVDYSRSP 78
+ M +R+PF+L L ++N ++FS +W + +++ +G Y C+ + S
Sbjct: 85 RFMRDREPFQLTTALRLWNFFLSVFSIYGSWTMFPFMVQQIRLYGLYGCGCEALSNLPSQ 144
Query: 79 MAMRMANTCWWYYFSKFTEFMDTLFFVLRKKNEHVSTLHVIHHGIMPMSVWFGLKF-APG 137
+ T SK EF+DT F VLRKK + LH HH M V+F + P
Sbjct: 145 AEYWLFLTI----LSKAVEFVDTFFLVLRKK--PLIFLHWYHH--MATFVFFCSNYPTPS 196
Query: 138 GHSTFFALLNTFVHIVMYFYYMVAAMGPKYQKYIWWKKYLTAFQMVQFVLIFSHQLQVLF 197
S ++N FVH MY YY +M K I +T Q+ QF + F + +++
Sbjct: 197 SQSRVGVIVNLFVHAFMYPYYFTRSMNIKVPAKI--SMAVTVLQLTQF-MCFIYGCTLMY 253
Query: 198 ------RPSCQYPRVFVYWIAMHGFLFLFLFSDFYKARYTTAERKSKAQN 241
+ +C P ++ + LF++F+ Y K + N
Sbjct: 254 YSLATNQYTCDTPMFVLHSTFALSSSYFVLFANFFHKAYLQRGGKREHPN 303
>U41011-5|AAA82288.2| 320|Caenorhabditis elegans Fatty acid
elongation protein 3 protein.
Length = 320
Score = 60.1 bits (139), Expect = 2e-09
Identities = 53/191 (27%), Positives = 80/191 (41%), Gaps = 11/191 (5%)
Query: 1 MSSPW-PTLAACVCYAYCAKELGPKLMANRKPFELRNILVVYNMAQTIFSAWIFYEYLMS 59
M + W ++ A V Y G K+M KPF+L L V+N IFS F
Sbjct: 34 MQNHWYQSITASVVYV-AVIFTGKKIMEKYKPFQLDTPLFVWNSFLAIFSILGFLRMTPE 92
Query: 60 GWWGHYDFRCQLVDYSRSPMAMRMANTCWW---YYFSKFTEFMDTLFFVLRKKNEHVSTL 116
W + YS + T +W + SK E +DT+F VLRK+ + L
Sbjct: 93 FVWS-WSAEGNSFKYSICHSSYAQGVTGFWTEQFAMSKLFELIDTIFIVLRKR--PLIFL 149
Query: 117 HVIHHGIMPMSVWFGLKFAPGGHSTFFALLNTFVHIVMYFYYMVAAMGPKYQKYIWWKKY 176
H HH + + W K +F +N VH +MY YY + ++ + K +
Sbjct: 150 HWYHHVTVMIYTWHAYKDHTAS-GRWFIWMNYGVHALMYSYYALRSLKFRLPKQM--AMV 206
Query: 177 LTAFQMVQFVL 187
+T Q+ Q V+
Sbjct: 207 VTTLQLAQMVM 217
>U61954-8|AAK29808.1| 286|Caenorhabditis elegans Fatty acid
elongation protein 5 protein.
Length = 286
Score = 45.2 bits (102), Expect = 7e-05
Identities = 59/237 (24%), Positives = 98/237 (41%), Gaps = 26/237 (10%)
Query: 9 AACVCYAYCAKELGPKL-MANRKPFELRNILVVYNMAQTIFS--AWIF-YEYLMS----- 59
+A + Y A G K M +RK F+L L ++N + FS ++F + L+S
Sbjct: 38 SAKLAVGYIATIFGLKYYMKDRKAFDLSTPLNIWNGILSTFSLLGFLFTFPTLLSVIRKD 97
Query: 60 GWWGHYDFRCQLVDYSRSPMAMRMANTCWWYYFSKFTEFMDTLFFVLRKKNEHVSTLHVI 119
G+ Y +L S S + + + SK E +DT+F VLRK+ + +H
Sbjct: 98 GFSHTYSHVSELYTDSTSGYWIFL------WVISKIPELLDTVFIVLRKR--PLIFMHWY 149
Query: 120 HHGIMPMSVWFGLKFAPGGHSTFFALLNTFVHIVMYFYYMVAAMGPKYQKYIWWKKYLTA 179
HH + H + +N +H MY YY++ ++ + + +T
Sbjct: 150 HHALTGYYA-LVCYHEDAVHMVWVVWMNYIIHAFMYGYYLLKSLKVPIPPSV--AQAITT 206
Query: 180 FQMVQFVLIFSHQLQVLFRPSCQYPRVFVYWI--AMHGFLFL----FLFSDFYKARY 230
QMVQF + Q+ V ++ + Y GF L +L+ FYK Y
Sbjct: 207 SQMVQFAVAIFAQVHVSYKHYVEGVEGLAYSFRGTAIGFFMLTTYFYLWIQFYKEHY 263
>U41109-11|AAB37037.2| 204|Caenorhabditis elegans Hypothetical
protein F52E1.2 protein.
Length = 204
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Query: 210 WIAMHGFLFLFLFSDFYKARYTTAERKSKAQNGLCMAVMDDSSSSLN---GRNGYKQEMG 266
WI + + ++D A YT + NGLC+ ++ DS S+ R G+K
Sbjct: 130 WIGLKSLSGAWQWADGSSATYTNWAPSQPSSNGLCVQMITDSLSNATYKYQRGGWKTYGC 189
Query: 267 SEVPSSY-ASSGADA 280
+ +SY GA A
Sbjct: 190 GKTSASYICEKGASA 204
>AL117202-24|CAD27612.1| 565|Caenorhabditis elegans Hypothetical
protein Y47D3A.30 protein.
Length = 565
Score = 29.9 bits (64), Expect = 2.7
Identities = 29/155 (18%), Positives = 63/155 (40%), Gaps = 10/155 (6%)
Query: 92 FSKFTEFMDTLFFVLRKKNEHVSTLHVIHHGIMPMSVWFGLKFAPGGHSTFFALLNTFVH 151
F+K + ++T+ + + T+H+IHH + +S F + N H
Sbjct: 244 FTKVVDLLETMLLLYDARRP--LTIHIIHH-FLSLSFAFTFYSQNFALHRWIVFFNLTAH 300
Query: 152 IVMYFYYMVAAMGPKYQKYIWWKKYLTAFQMVQ----FVLIFSHQLQVLFRPSCQYPRVF 207
+ +Y Y + ++ W ++ QM+Q F+ FS ++ C +
Sbjct: 301 VFLYAYLSGFKILNRWTPC--WVAVCSS-QMLQLILPFIATFSAAAKLARGTRCDANALG 357
Query: 208 VYWIAMHGFLFLFLFSDFYKARYTTAERKSKAQNG 242
+ + + + + LF++FY +R +K+ G
Sbjct: 358 LLTLQIGLGVLIILFAEFYWSRVQAFRKKNMKSGG 392
>Z66514-3|CAA91343.1| 854|Caenorhabditis elegans Hypothetical
protein K01A11.4 protein.
Length = 854
Score = 29.5 bits (63), Expect = 3.6
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 10/110 (9%)
Query: 123 IMPMSVWFGLKFAPGGHSTFFALLNTFV-HIVMYFYYMVAA-MGPKYQKYIWWKKYLTAF 180
+MP V F P +T L F+ HI MY +++AA + P Y W +
Sbjct: 336 LMPFLVMLHA-FMPTKGTTMCVPLARFIAHITMYLVFLIAAILRPTIGFYFAWTDSIEVT 394
Query: 181 QMVQFVLIFSHQLQVLFRPSCQYPRV-----FVYWIAMH--GFLFLFLFS 223
+ ++++ + + + RV F +W +F+FLFS
Sbjct: 395 VQALEIFMYAYVMGLALEKGILFYRVGRDGFFAFWWRWFDAALIFIFLFS 444
>U97189-2|AAC48165.2| 336|Caenorhabditis elegans Serpentine
receptor, class b (beta)protein 15 protein.
Length = 336
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 139 HSTFFALLNTFVHIVMYFYYMVAAMGPKY 167
HST FA+ F H++++ +Y++ M +Y
Sbjct: 231 HSTKFAVFVVFCHVILFGFYVIGIMILRY 259
>U46673-1|AAC48153.4| 1003|Caenorhabditis elegans Insulin receptor
substrate homologprotein 1 protein.
Length = 1003
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 234 ERKSKAQNGLCMAVMDDSSSSLNGRNGYKQEMGSEVPSSYASSGADALSFDVNKTERDTQ 293
E + KA +G+ SSS +G+ +K + S+ S+Y D+ K +++
Sbjct: 829 EFRPKADSGIADCT---PSSSFSGKKDHKNDGSSD--SAYMDKEGLKYLADIKKRKKEQG 883
Query: 294 IISFTVNKPKRVTQIISFDVNKAKR 318
I T + ++ I+S + NK R
Sbjct: 884 AIDTTNSSSSSLSTIVSIEDNKVTR 908
>AY342006-1|AAQ22724.1| 854|Caenorhabditis elegans TRP-3 channel
protein protein.
Length = 854
Score = 29.5 bits (63), Expect = 3.6
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 10/110 (9%)
Query: 123 IMPMSVWFGLKFAPGGHSTFFALLNTFV-HIVMYFYYMVAA-MGPKYQKYIWWKKYLTAF 180
+MP V F P +T L F+ HI MY +++AA + P Y W +
Sbjct: 336 LMPFLVMLHA-FMPTKGTTMCVPLARFIAHITMYLVFLIAAILRPTIGFYFAWTDSIEVT 394
Query: 181 QMVQFVLIFSHQLQVLFRPSCQYPRV-----FVYWIAMH--GFLFLFLFS 223
+ ++++ + + + RV F +W +F+FLFS
Sbjct: 395 VQALEIFMYAYVMGLALEKGILFYRVGRDGFFAFWWRWFDAALIFIFLFS 444
>AY064245-1|AAL40865.1| 1003|Caenorhabditis elegans insulin receptor
substrate-likeprotein protein.
Length = 1003
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 234 ERKSKAQNGLCMAVMDDSSSSLNGRNGYKQEMGSEVPSSYASSGADALSFDVNKTERDTQ 293
E + KA +G+ SSS +G+ +K + S+ S+Y D+ K +++
Sbjct: 829 EFRPKADSGIADCT---PSSSFSGKKDHKNDGSSD--SAYMDKEGLKYLADIKKRKKEQG 883
Query: 294 IISFTVNKPKRVTQIISFDVNKAKR 318
I T + ++ I+S + NK R
Sbjct: 884 AIDTTNSSSSSLSTIVSIEDNKVTR 908
>AJ276029-1|CAC81656.1| 854|Caenorhabditis elegans TRP homologous
cation channel proteinprotein.
Length = 854
Score = 29.5 bits (63), Expect = 3.6
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 10/110 (9%)
Query: 123 IMPMSVWFGLKFAPGGHSTFFALLNTFV-HIVMYFYYMVAA-MGPKYQKYIWWKKYLTAF 180
+MP V F P +T L F+ HI MY +++AA + P Y W +
Sbjct: 336 LMPFLVMLHA-FMPTKGTTMCVPLARFIAHITMYLVFLIAAILRPTIGFYFAWTDSIEVT 394
Query: 181 QMVQFVLIFSHQLQVLFRPSCQYPRV-----FVYWIAMH--GFLFLFLFS 223
+ ++++ + + + RV F +W +F+FLFS
Sbjct: 395 VQALEIFMYAYVMGLALEKGILFYRVGRDGFFAFWWRWFDAALIFIFLFS 444
>AF039716-3|AAB96736.1| 515|Caenorhabditis elegans Hypothetical
protein W03G9.2 protein.
Length = 515
Score = 29.5 bits (63), Expect = 3.6
Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 225 FYKARYTTAERKSKAQNGLCMAVMDDSSSSLNGRNGYKQEMGSEVPSSYASSGADALS-- 282
F +AR+ R K+Q GL + + D+ S + Y ++P +A+ L
Sbjct: 328 FRRARHVCGIRPHKSQPGLDLYIEIDTGSMRALKTNYLTV--RKLPQEFANVPTPILEVR 385
Query: 283 FDVNKTERDTQIISFTVNKPKRVTQIISFDVNKAKRVPHISFDVNEPK 330
F+ KTE D + K R I SFD K +++ SF +PK
Sbjct: 386 FEGAKTEEDVARRIAHIRKTGR-AYIKSFDTGK-RKIYQNSFFNGQPK 431
>Z81046-2|CAB02824.1| 295|Caenorhabditis elegans Hypothetical
protein C37E2.3 protein.
Length = 295
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/61 (22%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 150 VHIVMYFYYMVAAMGPKYQKYIWWKKYLTAFQMVQFVLIFSHQLQVLF---RPSCQYPRV 206
+ +V +Y + +G KY +W L +F + FV+ + + + F + +C+ R
Sbjct: 224 ISVVYVTFYFIIVLGVKYYNRMWVYPVLQSFSIDLFVISYILSVVIFFILLKAACKLNRQ 283
Query: 207 F 207
F
Sbjct: 284 F 284
>Z72503-9|CAA96599.2| 370|Caenorhabditis elegans Hypothetical
protein C26C6.7 protein.
Length = 370
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 4/32 (12%)
Query: 302 PKRVTQIISFDVNKAKRVPHISFDVNEPKRVT 333
P+ V + + FD+ + HISF+ NEP++VT
Sbjct: 84 PRTVRKQLRFDIPEV----HISFETNEPRKVT 111
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.328 0.137 0.448
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,513,312
Number of Sequences: 27539
Number of extensions: 355790
Number of successful extensions: 1118
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1090
Number of HSP's gapped (non-prelim): 21
length of query: 343
length of database: 12,573,161
effective HSP length: 82
effective length of query: 261
effective length of database: 10,314,963
effective search space: 2692205343
effective search space used: 2692205343
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 60 (28.3 bits)
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