Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000420-TA|BGIBMGA000420-PA|IPR000719|Protein kinase,
IPR011009|Protein kinase-like, IPR008271|Serine/threonine protein
kinase, active site, IPR002290|Serine/threonine protein kinase
         (484 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    54   2e-09

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 54.4 bits (125), Expect = 2e-09
 Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 3/149 (2%)

Query: 204 QLLDGLDYLHGQGVVHKDIKPGNLLLTLDQTLKITDFGVAEALDMFSQEDICYTGQGSPA 263
           Q+  G+++L    VVH+D+   N+L+  + T+K++DFG++   D++     C  G G   
Sbjct: 600 QVALGMEHLAKTRVVHRDLAARNVLVCENHTVKVSDFGLSR--DVYQDNVYCKNGGGKLP 657

Query: 264 FQPPEIANGAEQFSGTKVDIWSSGVTLYNMTT-GRYPFEGDNVYRLLEAISRXXXXXXXX 322
            +   + +   Q   T  D+WS GV L+ + T G  P+ G +   LL+ +          
Sbjct: 658 VRWMALESLTHQRYTTYSDVWSFGVLLWEIVTLGGTPYVGVHSSELLDFLKSGNRLARPA 717

Query: 323 XXXXXXXXXXXHMLNRDPTLRPTVHEIRR 351
                      +     P  RPT  E+ +
Sbjct: 718 NCSPDLYAVMLNCWKECPKNRPTFTELSK 746


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.136    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,646
Number of Sequences: 317
Number of extensions: 4117
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 1
length of query: 484
length of database: 114,650
effective HSP length: 59
effective length of query: 425
effective length of database: 95,947
effective search space: 40777475
effective search space used: 40777475
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 45 (22.2 bits)