GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000419-TA|BGIBMGA000419-PA|IPR008927|6-phosphogluconate
dehydrogenase, C-terminal-like, IPR006176|3-hydroxyacyl-CoA
dehydrogenase, NAD-binding, IPR006108|3-hydroxyacyl-CoA dehydrogenase,
C-terminal
         (323 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    29   0.061
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    29   0.061
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    29   0.061
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    22   5.3  

>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
          3-monooxygenase protein.
          Length = 290

 Score = 28.7 bits (61), Expect = 0.061
 Identities = 11/26 (42%), Positives = 17/26 (65%)

Query: 12 IVGSGLIGRSWAMLFASVGYQVTVYD 37
          +VG GL+G   A+  A  GY VT+++
Sbjct: 11 VVGGGLVGSLCAIFMAKRGYHVTLFE 36


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
          3-monooxygenase protein.
          Length = 445

 Score = 28.7 bits (61), Expect = 0.061
 Identities = 11/26 (42%), Positives = 17/26 (65%)

Query: 12 IVGSGLIGRSWAMLFASVGYQVTVYD 37
          +VG GL+G   A+  A  GY VT+++
Sbjct: 11 VVGGGLVGSLCAIFMAKRGYHVTLFE 36


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
          3-monooxygenase protein.
          Length = 445

 Score = 28.7 bits (61), Expect = 0.061
 Identities = 11/26 (42%), Positives = 17/26 (65%)

Query: 12 IVGSGLIGRSWAMLFASVGYQVTVYD 37
          +VG GL+G   A+  A  GY VT+++
Sbjct: 11 VVGGGLVGSLCAIFMAKRGYHVTLFE 36


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 6/28 (21%), Positives = 17/28 (60%)

Query: 91  FVQECVPENLDLKKKVFQNLDSVVDDNT 118
           F   C+  + D+++++F+ ++    D+T
Sbjct: 7   FALMCIACHPDIQERIFEEIEETFSDDT 34


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.317    0.134    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,487
Number of Sequences: 317
Number of extensions: 2420
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 323
length of database: 114,650
effective HSP length: 57
effective length of query: 266
effective length of database: 96,581
effective search space: 25690546
effective search space used: 25690546
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 43 (21.4 bits)