GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000419-TA|BGIBMGA000419-PA|IPR008927|6-phosphogluconate
dehydrogenase, C-terminal-like, IPR006176|3-hydroxyacyl-CoA
dehydrogenase, NAD-binding, IPR006108|3-hydroxyacyl-CoA dehydrogenase,
C-terminal
         (323 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    26   1.6  
AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A...    25   2.2  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   2.9  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    24   5.0  

>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
           protein I protein.
          Length = 1340

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 4/44 (9%)

Query: 32  QVTVYD-VVAKQITDAIE--DIKYQLHTL-ENDGLLRGELKASE 71
           Q T +D   AK IT  +E  D+ ++  T  +NDGL++ EL+ SE
Sbjct: 350 QFTHHDGTPAKGITGKVEVSDVGFETTTTSDNDGLIKLELQPSE 393


>AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A2
           protein.
          Length = 496

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 15/71 (21%), Positives = 33/71 (46%)

Query: 32  QVTVYDVVAKQITDAIEDIKYQLHTLENDGLLRGELKASEQFQCIKGSTDLETAVKGAIF 91
           +++  D+  K   D+ ED ++ +     DG++   L   + +   K STD+ +  +  + 
Sbjct: 379 RISPQDIARKLGLDSPEDAEFIVAKAIRDGVIEATLDPEKGYMRTKESTDIYSTREPQLA 438

Query: 92  VQECVPENLDL 102
             + +   LDL
Sbjct: 439 FHQRISFCLDL 449


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 290 VPIEKLQDRRNWRDLCLMRLSLLKKEMNKKYQS 322
           VP+++ +    W D  L RL  +K+   + YQ+
Sbjct: 395 VPVQRPKPNPPWADRTLKRLKRVKRAAYRHYQT 427


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 16/44 (36%), Positives = 19/44 (43%)

Query: 7   SEKIGIVGSGLIGRSWAMLFASVGYQVTVYDVVAKQITDAIEDI 50
           S  IG       G S A    SVG  V V DV+   IT A+  +
Sbjct: 142 SAAIGESADAAHGSSVAGGLGSVGSFVAVNDVIGMNITPALSQV 185


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.134    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 283,638
Number of Sequences: 2123
Number of extensions: 9873
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 4
length of query: 323
length of database: 516,269
effective HSP length: 64
effective length of query: 259
effective length of database: 380,397
effective search space: 98522823
effective search space used: 98522823
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 48 (23.4 bits)