GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000419-TA|BGIBMGA000419-PA|IPR008927|6-phosphogluconate
dehydrogenase, C-terminal-like, IPR006176|3-hydroxyacyl-CoA
dehydrogenase, NAD-binding, IPR006108|3-hydroxyacyl-CoA dehydrogenase,
C-terminal
         (323 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...   145   5e-37

>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score =  145 bits (351), Expect = 5e-37
 Identities = 71/130 (54%), Positives = 86/130 (66%), Gaps = 1/130 (0%)

Query: 187 LTREIDGFVLNRIQYAILDEVWRLXXXXXXXXXXXXXXMSEGLGMRYAFLGALETAHLNA 246
           LTREIDGFVLNRIQYAIL+E WRL              MSEGLGMRYAFLGA E AHLNA
Sbjct: 1   LTREIDGFVLNRIQYAILNEAWRLVADGILNAKDVDAVMSEGLGMRYAFLGAFEAAHLNA 60

Query: 247 EGMQSYIDRYGETIYRVSNEMGPAPRMTTNKSRNSVCEQLEKLVPIEKLQDRRNWRDLCL 306
           EGM+ Y + Y  +IY VS   GP P+    +    +  +L ++ P+EKL++RR WRD  L
Sbjct: 61  EGMKKYCETYKNSIYDVSMTFGPVPKF-EGEMAEKISNELNEMCPLEKLKERRIWRDDAL 119

Query: 307 MRLSLLKKEM 316
            +LSLLKK +
Sbjct: 120 TKLSLLKKRI 129


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.317    0.134    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,184
Number of Sequences: 429
Number of extensions: 3273
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1
length of query: 323
length of database: 140,377
effective HSP length: 58
effective length of query: 265
effective length of database: 115,495
effective search space: 30606175
effective search space used: 30606175
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)