Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000418-TA|BGIBMGA000418-PA|IPR003534|Major royal jelly
protein, IPR000437|Prokaryotic membrane lipoprotein lipid attachment
site
         (310 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    25   0.71 
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    25   0.94 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   2.2  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   5.0  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   8.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 25.0 bits (52), Expect = 0.71
 Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 4/39 (10%)

Query: 234 GCWNSNKPYTPENNVLIFSDPKLYEFPNDLKIDDEGLMW 272
           G WN    Y+P+N+   + +P  Y   +  +   +GL W
Sbjct: 74  GQWN----YSPDNHFEQYPNPTYYNLADPARDSRKGLFW 108


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 10/36 (27%), Positives = 22/36 (61%)

Query: 9   ALVVASCEAATPQLRFAWKEVDYEWNTPAERENAIK 44
           A +++SC +   Q  +   ++D+E+   A++EN +K
Sbjct: 123 ASLISSCLSFFSQWGYDGIDIDWEYPANADKENFVK 158


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/28 (32%), Positives = 16/28 (57%)

Query: 231 DGVGCWNSNKPYTPENNVLIFSDPKLYE 258
           D V  W+ N+ Y+ E N++   +  +YE
Sbjct: 179 DAVIKWSPNEDYSCEYNLVWIKEESIYE 206


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)

Query: 92  QNTCDDAFAYIPDLGGYGVVVY 113
           +NT    F   P+L GY VVV+
Sbjct: 80  KNTEPGMFRVAPELLGYSVVVF 101


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)

Query: 84  ANIVVDVDQNTCD 96
           +N+V + DQN CD
Sbjct: 949 SNLVFNPDQNVCD 961


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/21 (42%), Positives = 10/21 (47%)

Query: 163  FRTMFFHAFSSTKEFCVSTEL 183
            F  M FH F +      STEL
Sbjct: 1342 FVAMLFHRFGTIAHILASTEL 1362


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/21 (42%), Positives = 10/21 (47%)

Query: 163  FRTMFFHAFSSTKEFCVSTEL 183
            F  M FH F +      STEL
Sbjct: 1342 FVAMLFHRFGTIAHILASTEL 1362


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/21 (42%), Positives = 10/21 (47%)

Query: 163  FRTMFFHAFSSTKEFCVSTEL 183
            F  M FH F +      STEL
Sbjct: 1342 FVAMLFHRFGTIAHILASTEL 1362


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/21 (42%), Positives = 10/21 (47%)

Query: 163  FRTMFFHAFSSTKEFCVSTEL 183
            F  M FH F +      STEL
Sbjct: 1342 FVAMLFHRFGTIAHILASTEL 1362


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.322    0.138    0.431 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,253
Number of Sequences: 317
Number of extensions: 3674
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 10
length of query: 310
length of database: 114,650
effective HSP length: 57
effective length of query: 253
effective length of database: 96,581
effective search space: 24434993
effective search space used: 24434993
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 43 (21.4 bits)