Silkworm BLAST Result against arabidopsis

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000418-TA|BGIBMGA000418-PA|IPR003534|Major royal jelly
protein, IPR000437|Prokaryotic membrane lipoprotein lipid attachment
site
         (310 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g26790.2 68417.m03859 GDSL-motif lipase/hydrolase family prot...    28   6.9  
At4g26790.1 68417.m03858 GDSL-motif lipase/hydrolase family prot...    28   6.9  
At4g39800.1 68417.m05637 inositol-3-phosphate synthase isozyme 1...    28   9.2  
At4g12770.1 68417.m02004 auxilin-related low similarity to SP|Q2...    28   9.2  
At3g60630.1 68416.m06784 scarecrow transcription factor family p...    28   9.2  
At2g22240.1 68415.m02640 inositol-3-phosphate synthase isozyme 2...    28   9.2  

>At4g26790.2 68417.m03859 GDSL-motif lipase/hydrolase family protein
           similar to family II lipase EXL3 (GI:15054386), EXL1
           (GI:15054382), EXL2 (GI:15054384) [Arabidopsis
           thaliana]; contains Pfam profile PF00657:
           Lipase/Acylhydrolase with GDSL-like motif
          Length = 351

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 11/46 (23%), Positives = 21/46 (45%)

Query: 26  WKEVDYEWNTPAERENAIKSGAGNQIVRPSIVIFDLKTDQLLHRYF 71
           WKEV+Y         + +     N+I+  S+ +  + T+  L  Y+
Sbjct: 130 WKEVEYYKEYQTRLRSYLGEEKANEIISESLYLISIGTNDFLENYY 175


>At4g26790.1 68417.m03858 GDSL-motif lipase/hydrolase family protein
           similar to family II lipase EXL3 (GI:15054386), EXL1
           (GI:15054382), EXL2 (GI:15054384) [Arabidopsis
           thaliana]; contains Pfam profile PF00657:
           Lipase/Acylhydrolase with GDSL-like motif
          Length = 351

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 11/46 (23%), Positives = 21/46 (45%)

Query: 26  WKEVDYEWNTPAERENAIKSGAGNQIVRPSIVIFDLKTDQLLHRYF 71
           WKEV+Y         + +     N+I+  S+ +  + T+  L  Y+
Sbjct: 130 WKEVEYYKEYQTRLRSYLGEEKANEIISESLYLISIGTNDFLENYY 175


>At4g39800.1 68417.m05637 inositol-3-phosphate synthase isozyme 1
          / myo-inositol-1-phosphate synthase 1 / MI-1-P synthase
          1 / IPS 1 identical to SP|P42801 Inositol-3-phosphate
          synthase isozyme 1 (EC 5.5.1.4) (Myo-inositol-1-
          phosphate synthase 1) (MI-1-P synthase 1) (IPS 1)
          {Arabidopsis thaliana}
          Length = 511

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 2/57 (3%)

Query: 10 LVVASCEAATPQLRFAWKEVD--YEWNTPAERENAIKSGAGNQIVRPSIVIFDLKTD 64
          + + S +  +P +++   E+   Y++ T         +G    IV+P  V +D KTD
Sbjct: 1  MFIESFKVESPNVKYTENEIHSVYDYETTEVVHEKTVNGTYQWIVKPKTVKYDFKTD 57


>At4g12770.1 68417.m02004 auxilin-related low similarity to
           SP|Q27974 Auxilin {Bos taurus}
          Length = 909

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 2/51 (3%)

Query: 75  EDMKEDSFFANIVVDVDQNTCDDAFAYIPDLGGYGVVVYSLKQND--SWRV 123
           E++++ S   NIV D+       A + +P+L G+ +++  LK++D   W V
Sbjct: 714 ENLRKASSATNIVDDLSSIFGGSAISELPNLVGFKMLMEKLKRDDVPGWNV 764


>At3g60630.1 68416.m06784 scarecrow transcription factor family
           protein scarecrow-like 6, Arabidopsis thaliana,
           EMBL:AF036303
          Length = 623

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 1/58 (1%)

Query: 154 ALSEPRENGFRTMFFHAFSSTKEFCVSTELLRNYTHIDKQEAFHDFKLLG-DRGQGTQ 210
           +LS P+   FR   + AFS T  F        N T ++  E F    ++  D G G Q
Sbjct: 316 SLSPPQNLIFRIAAYRAFSETSPFLQFVNFTANQTILESFEGFDRIHIVDFDIGYGGQ 373


>At2g22240.1 68415.m02640 inositol-3-phosphate synthase isozyme 2
          / myo-inositol-1-phosphate synthase 2 / MI-1-P synthase
          2 / IPS 2 identical to SP|Q38862
          Myo-inositol-1-phosphate synthase isozyme 2 (EC
          5.5.1.4) (MI-1-P synthase 2) (IPS 2) {Arabidopsis
          thaliana}
          Length = 510

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 3/57 (5%)

Query: 10 LVVASCEAATPQLRFAWKEVD--YEWNTPAERENAIKSGAGNQIVRPSIVIFDLKTD 64
          + + S +  +P +++   E++  Y++ T  E  +  ++G    +V+P  V +D KTD
Sbjct: 1  MFIESFKVESPNVKYTENEINSVYDYET-TEVVHENRNGTYQWVVKPKTVKYDFKTD 56


  Database: arabidopsis
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.322    0.138    0.431 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,047,608
Number of Sequences: 28952
Number of extensions: 368109
Number of successful extensions: 684
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 682
Number of HSP's gapped (non-prelim): 6
length of query: 310
length of database: 12,070,560
effective HSP length: 81
effective length of query: 229
effective length of database: 9,725,448
effective search space: 2227127592
effective search space used: 2227127592
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 59 (27.9 bits)