Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000417-TA|BGIBMGA000417-PA|undefined
(790 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g62110.1 68418.m07796 hypothetical protein 36 0.14
At3g19210.1 68416.m02438 DNA repair protein RAD54, putative simi... 35 0.24
At1g22870.1 68414.m02855 protein kinase family protein contains ... 34 0.32
At4g17695.1 68417.m02643 myb family transcription factor (KAN3) ... 34 0.42
At1g77500.1 68414.m09025 expressed protein contains Pfam domains... 33 0.56
At1g20720.1 68414.m02596 helicase-related similar to BRCA1-bindi... 33 0.74
At5g36740.1 68418.m04402 PHD finger family protein 33 0.97
At5g36670.1 68418.m04388 PHD finger family protein 33 0.97
At4g09960.2 68417.m01630 MADS-box protein (AGL11) 33 0.97
At2g33350.1 68415.m04088 hypothetical protein 32 1.7
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 31 2.2
At4g34430.4 68417.m04893 DNA-binding family protein contains Pfa... 31 3.0
At4g34430.3 68417.m04892 DNA-binding family protein contains Pfa... 31 3.0
At4g34430.2 68417.m04891 DNA-binding family protein contains Pfa... 31 3.0
At4g34430.1 68417.m04890 DNA-binding family protein contains Pfa... 31 3.0
At5g08520.1 68418.m01011 myb family transcription factor contain... 31 3.9
At5g07340.1 68418.m00838 calnexin, putative identical to calnexi... 30 6.9
At4g14620.1 68417.m02250 expressed protein contains Pfam profile... 30 6.9
At1g28400.1 68414.m03492 expressed protein similar to E6 (GI:100... 30 6.9
At5g03820.1 68418.m00351 GDSL-motif lipase/hydrolase family prot... 29 9.1
At4g37180.2 68417.m05264 myb family transcription factor contain... 29 9.1
At4g37180.1 68417.m05263 myb family transcription factor contain... 29 9.1
At3g45130.1 68416.m04871 cycloartenol synthase, putative / 2,3-e... 29 9.1
At3g20770.1 68416.m02627 ethylene-insensitive 3 (EIN3) identical... 29 9.1
At3g18810.1 68416.m02389 protein kinase family protein contains ... 29 9.1
At3g13280.1 68416.m01672 expressed protein contains Pfam profile... 29 9.1
At1g32460.1 68414.m04006 expressed protein 29 9.1
>At5g62110.1 68418.m07796 hypothetical protein
Length = 691
Score = 35.5 bits (78), Expect = 0.14
Identities = 32/128 (25%), Positives = 53/128 (41%), Gaps = 13/128 (10%)
Query: 136 FENSNDDHRNIGTVELYSEDRENPIYGTKIHKGKIREPTRFNYTENNTFPSQEIYQNYA- 194
F N N RN ED N H+G++ F + +N F I Y+
Sbjct: 472 FANDNQLERNAILAGYSIEDINN--LSINNHQGQVLSGVNFEFANDNQFERNAILAGYSI 529
Query: 195 ----NMPM--ITD-THETTADGDTKSNNPDKNIQNQNSVNKFNTNENNAVQNTHNPIKFQ 247
N+ + + D ++E T + +N + I + N++N+ N N N + T N I
Sbjct: 530 EDINNLSINNVNDNSNEETLNSIAANNEMNFTILDVNTINQVNGNSN---EETLNSIVAN 586
Query: 248 KVVDFTNL 255
++FT L
Sbjct: 587 SEINFTTL 594
>At3g19210.1 68416.m02438 DNA repair protein RAD54, putative similar
to RAD54 GB:CAA71278 from [Drosophila melanogaster]
(Mol. Cell. Biol.(1997) 17 (10), 6097-6104)
Length = 852
Score = 34.7 bits (76), Expect = 0.24
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 177 NYTENNTFPSQEIYQNYANMPMITDTHETTADGDTKSNNPDKNIQNQNSVNKFNTNENNA 236
N+T + +++Y P+I E TA + K+ D++ + + VN+F NA
Sbjct: 262 NFTNPGSLGDAAHFRHYYEAPIICG-REPTATEEEKNLAADRSAELSSKVNQFILRRTNA 320
Query: 237 VQNTHNPIKFQKVV 250
+ + H P K +VV
Sbjct: 321 LLSNHLPPKIIEVV 334
>At1g22870.1 68414.m02855 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 913
Score = 34.3 bits (75), Expect = 0.32
Identities = 26/118 (22%), Positives = 43/118 (36%)
Query: 125 PNNFNYFNSQTFENSNDDHRNIGTVELYSEDRENPIYGTKIHKGKIREPTRFNYTENNTF 184
P N FN+ T ++ + + ++ T + P + TR N T
Sbjct: 680 PANSPQFNNSTVQSQSSNRTSVPTTCPAVDLEWPPRQSFNATAQPANDETRINAAGTPTT 739
Query: 185 PSQEIYQNYANMPMITDTHETTADGDTKSNNPDKNIQNQNSVNKFNTNENNAVQNTHN 242
PS + +AN P ++ T + G S I N S + N + Q T+N
Sbjct: 740 PSFDELDPFANWPPRPNSASTASGGFHNSTTTQPPINNSGSGLRNNLTDGRQFQTTNN 797
>At4g17695.1 68417.m02643 myb family transcription factor (KAN3)
contains Pfam profile: PF00249 myb-like DNA-binding
domain; identical to cDNA GARP-like putative
transcription factor KANADI3 (KAN3) GI:15723596
Length = 322
Score = 33.9 bits (74), Expect = 0.42
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
Query: 102 FATQAFDGVNDNDGQKSGVLQYNPNNFNYFNSQTFENSNDDHRNIGTVELYSEDRENPIY 161
F ++A D N + LQ+ NN T NSN +H+ +L S PI
Sbjct: 40 FQSKASDLDNKSSNNLIHTLQFTSNN-----EATKINSNQEHKESLDQDLRSIFMMRPIR 94
Query: 162 GTKIHKGKIREPTRFNYTENNTFPSQEIYQNYANMPMITD 201
G +++ ++ + ++ T N F E+ +A+ +IT+
Sbjct: 95 GIPLYQNQVLDHYYYSSTSPNPFFFSEVNGQHASRRLITN 134
>At1g77500.1 68414.m09025 expressed protein contains Pfam domains,
PF04782: Protein of unknown function (DUF632) and
PF04783: Protein of unknown function (DUF630)
Length = 879
Score = 33.5 bits (73), Expect = 0.56
Identities = 35/156 (22%), Positives = 62/156 (39%), Gaps = 10/156 (6%)
Query: 69 TGFSSAGVNQESSTRLYAPAFPTALDATDFGNNFATQAFDGVNDNDGQKSGVLQYNPNNF 128
+GF + GV + S + L P+ PT + DF N F T D +S Y P
Sbjct: 232 SGFRNTGVQRRSPSPLPPPSPPT-VSTWDFLNVFDTY------DYSNARSRASGYYPMGM 284
Query: 129 NYFNSQTFENSNDDHRNIGTVELYSEDRE-NPIYGTKIHKGKIREPTRFNYTENNTFPSQ 187
+S + I +E +E +Y G + + ++N FP +
Sbjct: 285 ASISSSPDSKEVREREGIPELEEVTEQEVIKQVYRRPKRPGLEKVKEHRDEHKHNVFPER 344
Query: 188 EIYQNYANMPMITDTHETTADGDTKSNNPDKNIQNQ 223
I N +PM E++ D +T S+ +++++
Sbjct: 345 NI--NKREVPMPEQVTESSLDSETISSFSGSDVESE 378
>At1g20720.1 68414.m02596 helicase-related similar to BRCA1-binding
helicase-like protein BACH1 (GI:13661819) Homo
sapiens].;
Length = 1169
Score = 33.1 bits (72), Expect = 0.74
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 211 TKSNNPDKNIQNQNSVNKFNTNENNAVQNTHNPIKFQKVVDFTNLKPHYPISFHSISTTT 270
++ ++ +KN ++ +F EN +QN + ++ KV D+TN P Y + S +
Sbjct: 789 SQEDSVEKNFSSEKQSKEFRRKENQ-IQNKSSQVE-PKVEDYTNSNPKYHFMYESKAFGY 846
Query: 271 PRDI 274
RD+
Sbjct: 847 HRDV 850
>At5g36740.1 68418.m04402 PHD finger family protein
Length = 1179
Score = 32.7 bits (71), Expect = 0.97
Identities = 35/161 (21%), Positives = 64/161 (39%), Gaps = 6/161 (3%)
Query: 76 VNQESSTRLYAPAFPTALDATDFGNNFATQAFDGVNDNDGQKSGVLQ-YNPNNFNYFNSQ 134
V+ + L AP +D + N ++ D ++ + +GV NP + +
Sbjct: 969 VSSPNGLVLLAPEMTLPVDVEE---NKPEESKDSAHERNCATAGVESPSNPVDSCLKLTY 1025
Query: 135 TFENSNDDHRNIGTVELYSEDRENPIYGTKIHKGKIREPTRFNYTENNTFPSQEIYQNYA 194
E ND N+ ++ E++E+ T I + + ++ + + QEI
Sbjct: 1026 VEEGDNDRESNLKLLDGSVEEKEDTKKLTDIDINSLPDEVDDSHADQSDTKEQEIDDKED 1085
Query: 195 NMPMITDTHETTADGDTKSN-NPDKN-IQNQNSVNKFNTNE 233
P+ D E A+G +SN PD N + N + T E
Sbjct: 1086 KTPLSDDGCEGKAEGTKESNQQPDSNKVDNSQPLGNGGTGE 1126
>At5g36670.1 68418.m04388 PHD finger family protein
Length = 1193
Score = 32.7 bits (71), Expect = 0.97
Identities = 35/161 (21%), Positives = 64/161 (39%), Gaps = 6/161 (3%)
Query: 76 VNQESSTRLYAPAFPTALDATDFGNNFATQAFDGVNDNDGQKSGVLQ-YNPNNFNYFNSQ 134
V+ + L AP +D + N ++ D ++ + +GV NP + +
Sbjct: 983 VSSPNGLVLLAPEMTLPVDVEE---NKPEESKDSAHERNCATAGVESPSNPVDSCLKLTY 1039
Query: 135 TFENSNDDHRNIGTVELYSEDRENPIYGTKIHKGKIREPTRFNYTENNTFPSQEIYQNYA 194
E ND N+ ++ E++E+ T I + + ++ + + QEI
Sbjct: 1040 VEEGDNDRESNLKLLDGSVEEKEDTKKLTDIDINSLPDEVDDSHADQSDTKEQEIDDKED 1099
Query: 195 NMPMITDTHETTADGDTKSN-NPDKN-IQNQNSVNKFNTNE 233
P+ D E A+G +SN PD N + N + T E
Sbjct: 1100 KTPLSDDGCEGKAEGTKESNQQPDSNKVDNSQPLGNGGTGE 1140
>At4g09960.2 68417.m01630 MADS-box protein (AGL11)
Length = 216
Score = 32.7 bits (71), Expect = 0.97
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 10/144 (6%)
Query: 380 SHGKRYEYSNNNINMT---FKYESNESRNPLNNIDEIVPA--SSNLVDLNYPQQQIFSTF 434
+ G+ YEY+NNNI T +K ++S N + + EI A L Q I ++
Sbjct: 50 TRGRLYEYANNNIRSTIERYKKACSDSTN-TSTVQEINAAYYQQESAKLRQQIQTIQNSN 108
Query: 435 KKMPEISFSDYSSIKSFKDSQQKLNDFSNAYRXXXXXXXXXXXYWGNTYEVTELPSFKKH 494
+ + S S S+K K + +L + R + T +V E+ +++H
Sbjct: 109 RNLMGDSLSSL-SVKELKQVENRLEKAISRIRSKKEIELDNENIYLRT-KVAEVERYQQH 166
Query: 495 PH--FSDDLDDEIVSIPKRNKYHH 516
H S + I ++ RN + H
Sbjct: 167 HHQMVSGSEINAIEALASRNYFAH 190
>At2g33350.1 68415.m04088 hypothetical protein
Length = 440
Score = 31.9 bits (69), Expect = 1.7
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 176 FNYTENNTFPSQEIYQNYANMPMITDTHETTADGDTKSNNPDKNIQNQNSVNKFNTNEN- 234
FN + T S I + + T+T TT + + +NN + N+Q+ N NT+ +
Sbjct: 70 FNQSSEVTSTSN-ILEKSGSFHSNTNTTTTTENSNNNNNNKNTNLQDDEDDNN-NTDLSI 127
Query: 235 --NAVQNTHNPIKFQKVVDFTNLKPHYPISFHSISTTTPRDIIDYGS 279
++ ++ N I +DF++ YP+ H + T +D D+ S
Sbjct: 128 IFDSQEDFENDITAS--IDFSSSSLQYPVIDH-LLTAISQDQFDFSS 171
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 31.5 bits (68), Expect = 2.2
Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 212 KSNNPDKNIQNQNSVNKFNT---NENNAVQNTHNPIKFQKVVDFTNLKPH-YPISFHSIS 267
+S+NP+ IQ+ +S NT N N + N H I+F VD NLK SF ++
Sbjct: 282 QSSNPNFLIQSASSQGMLNTTPNNNNQSFMNQHGLIQFDP-VDNINLKSSGTNNSFFNLG 340
Query: 268 TTTPRDIIDYGSLPHSHSGNAYENAVSENNSQMVKSGSNINGKYNFNK-----HININDD 322
SLP +S + + EN + +GSN++ K + ND
Sbjct: 341 FFQENTKNSETSLPSLYSTDVLVHHREEN----LNAGSNVSATALLQKATQMGSVTSNDP 396
Query: 323 NAIF 326
+A+F
Sbjct: 397 SALF 400
>At4g34430.4 68417.m04893 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 986
Score = 31.1 bits (67), Expect = 3.0
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 5/114 (4%)
Query: 132 NSQTFENSNDDHRNIGTVELYSEDRENPIYGT-KIHKGKIREPTR-FNYTENNTFPSQEI 189
NS + + + V L S+DRE P T K + + E + + TEN+T +
Sbjct: 616 NSHKDDQPEEKSKKAEEVSLNSDDREMPDTDTGKETQDSVSEEKQPGSRTENSTTKLDAV 675
Query: 190 YQNYANMPMITDTHETTADGDTKSNN--PDKNIQNQ-NSVNKFNTNENNAVQNT 240
+ ++ P+ TD E D S + K +Q NK ++ +A Q+T
Sbjct: 676 QEKRSSKPVTTDNSEKPVDIICPSQDKCSGKELQEPLKDGNKLSSENKDASQST 729
>At4g34430.3 68417.m04892 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 983
Score = 31.1 bits (67), Expect = 3.0
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 5/114 (4%)
Query: 132 NSQTFENSNDDHRNIGTVELYSEDRENPIYGT-KIHKGKIREPTR-FNYTENNTFPSQEI 189
NS + + + V L S+DRE P T K + + E + + TEN+T +
Sbjct: 614 NSHKDDQPEEKSKKAEEVSLNSDDREMPDTDTGKETQDSVSEEKQPGSRTENSTTKLDAV 673
Query: 190 YQNYANMPMITDTHETTADGDTKSNN--PDKNIQNQ-NSVNKFNTNENNAVQNT 240
+ ++ P+ TD E D S + K +Q NK ++ +A Q+T
Sbjct: 674 QEKRSSKPVTTDNSEKPVDIICPSQDKCSGKELQEPLKDGNKLSSENKDASQST 727
>At4g34430.2 68417.m04891 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 985
Score = 31.1 bits (67), Expect = 3.0
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 5/114 (4%)
Query: 132 NSQTFENSNDDHRNIGTVELYSEDRENPIYGT-KIHKGKIREPTR-FNYTENNTFPSQEI 189
NS + + + V L S+DRE P T K + + E + + TEN+T +
Sbjct: 616 NSHKDDQPEEKSKKAEEVSLNSDDREMPDTDTGKETQDSVSEEKQPGSRTENSTTKLDAV 675
Query: 190 YQNYANMPMITDTHETTADGDTKSNN--PDKNIQNQ-NSVNKFNTNENNAVQNT 240
+ ++ P+ TD E D S + K +Q NK ++ +A Q+T
Sbjct: 676 QEKRSSKPVTTDNSEKPVDIICPSQDKCSGKELQEPLKDGNKLSSENKDASQST 729
>At4g34430.1 68417.m04890 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 985
Score = 31.1 bits (67), Expect = 3.0
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 5/114 (4%)
Query: 132 NSQTFENSNDDHRNIGTVELYSEDRENPIYGT-KIHKGKIREPTR-FNYTENNTFPSQEI 189
NS + + + V L S+DRE P T K + + E + + TEN+T +
Sbjct: 616 NSHKDDQPEEKSKKAEEVSLNSDDREMPDTDTGKETQDSVSEEKQPGSRTENSTTKLDAV 675
Query: 190 YQNYANMPMITDTHETTADGDTKSNN--PDKNIQNQ-NSVNKFNTNENNAVQNT 240
+ ++ P+ TD E D S + K +Q NK ++ +A Q+T
Sbjct: 676 QEKRSSKPVTTDNSEKPVDIICPSQDKCSGKELQEPLKDGNKLSSENKDASQST 729
>At5g08520.1 68418.m01011 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 298
Score = 30.7 bits (66), Expect = 3.9
Identities = 30/135 (22%), Positives = 53/135 (39%), Gaps = 7/135 (5%)
Query: 108 DGVNDNDGQKSGVLQYNPNNFNYFNSQTFENSNDDHRNIGTVELYSEDRENPIYGTKIHK 167
+G N + G + + N+ ++Q ++ +D R G E R + K K
Sbjct: 78 EGSNGHAGDEGASSKKGGNSHAGESNQAGKSKSDQERRKGIAWTEDEHRLFLLGLDKYGK 137
Query: 168 GKIREPTR-FNYTENNTFPSQEIYQNYANMPMI------TDTHETTADGDTKSNNPDKNI 220
G R +R F T T + + + + + + H+ T+ G+ + P I
Sbjct: 138 GDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVGNADVSTPQGPI 197
Query: 221 QNQNSVNKFNTNENN 235
QN+ N N N NN
Sbjct: 198 TGQNNSNNNNNNNNN 212
>At5g07340.1 68418.m00838 calnexin, putative identical to calnexin
homolog 2 from Arabidopsis thaliana [SP|Q38798], strong
similarity to calnexin homolog 1, Arabidopsis thaliana,
EMBL:AT08315 [SP|P29402]; contains Pfam profile PF00262
calreticulin family
Length = 532
Score = 29.9 bits (64), Expect = 6.9
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 6 IYILFIALFYLYISAEAKKSKKNRRPYVDEETSTPQA 42
I I+F++LF+ I AK + ++P ETST +A
Sbjct: 475 IVIVFLSLFFKLIFGGAKAKVEKKKPETAAETSTSEA 511
>At4g14620.1 68417.m02250 expressed protein contains Pfam profile
PF04720: Protein of unknown function (DUF506)
Length = 341
Score = 29.9 bits (64), Expect = 6.9
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 290 ENAVSENNSQMVKSGSNINGKYNFNKHININDDNAIFSNHYSLNSV 335
+N + ENN + K+G N + FN + +I+DD F ++ + S+
Sbjct: 67 QNYMEENNDKQTKNGRNTHRCNCFNGNNDISDDELDFFDYDNFKSL 112
>At1g28400.1 68414.m03492 expressed protein similar to E6
(GI:1000090) [Gossypium barbadense]
Length = 335
Score = 29.9 bits (64), Expect = 6.9
Identities = 25/118 (21%), Positives = 51/118 (43%), Gaps = 7/118 (5%)
Query: 210 DTKSNNPDKNIQNQNSVNKFNTNENNAVQNTHNPIKFQKVVDFTNLKPHYPISFHSISTT 269
+T NN + N + N+ NK + N+ +T P + F N + +YP + T
Sbjct: 88 ETTYNNNNDNKEEFNNNNKNDEKVNSKTFST--PSLSETEESFNNYEENYPKKTENYGTK 145
Query: 270 TPRDIIDYGSLPHSHSGNAYE----NAVSENNSQMVKSGSNINGKYNFNKHININDDN 323
+ ++ + + + N E N EN ++ + +N N YN+ N+ +++
Sbjct: 146 GYNNE-EFNNNNNKYDANFKEEFNNNKYDENYAKEEFNNNNNNNNYNYKYDENVKEES 202
>At5g03820.1 68418.m00351 GDSL-motif lipase/hydrolase family protein
similar to family II lipase EXL3 (GI:15054386) and EXL1
(GI:15054382), EXL2 (GI:15054384) [Arabidopsis
thaliana]; contains Pfam profile PF00657:
Lipase/Acylhydrolase with GDSL-like motif
Length = 354
Score = 29.5 bits (63), Expect = 9.1
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 206 TADGDTKSNNPDKNIQNQNSVNKFNTNENNAVQNTHNPIKFQKVVDFTNLKP 257
T G+T +NN NQ++V+ FNT NN N N + K+V F P
Sbjct: 229 TLFGETGNNNTCVERLNQDAVS-FNTKLNNTSMNLTNNLPGLKLVVFDIYNP 279
>At4g37180.2 68417.m05264 myb family transcription factor contains
Pfam domain, PF00249: Myb-like DNA-binding domain
Length = 363
Score = 29.5 bits (63), Expect = 9.1
Identities = 19/98 (19%), Positives = 38/98 (38%)
Query: 200 TDTHETTADGDTKSNNPDKNIQNQNSVNKFNTNENNAVQNTHNPIKFQKVVDFTNLKPHY 259
TD + +NP+ ++ N + N Q + P + + F P
Sbjct: 114 TDKKSWMSSAQLWISNPNSQFRSTNEEEEDRCVSQNPFQTCNYPNQGGVFMPFNRPPPPP 173
Query: 260 PISFHSISTTTPRDIIDYGSLPHSHSGNAYENAVSENN 297
P + S+ T T ++DY + SH + + S+++
Sbjct: 174 PPAPLSLMTPTSEMMMDYSRIEQSHHHHQFNKPSSQSH 211
>At4g37180.1 68417.m05263 myb family transcription factor contains
Pfam domain, PF00249: Myb-like DNA-binding domain
Length = 356
Score = 29.5 bits (63), Expect = 9.1
Identities = 19/98 (19%), Positives = 38/98 (38%)
Query: 200 TDTHETTADGDTKSNNPDKNIQNQNSVNKFNTNENNAVQNTHNPIKFQKVVDFTNLKPHY 259
TD + +NP+ ++ N + N Q + P + + F P
Sbjct: 107 TDKKSWMSSAQLWISNPNSQFRSTNEEEEDRCVSQNPFQTCNYPNQGGVFMPFNRPPPPP 166
Query: 260 PISFHSISTTTPRDIIDYGSLPHSHSGNAYENAVSENN 297
P + S+ T T ++DY + SH + + S+++
Sbjct: 167 PPAPLSLMTPTSEMMMDYSRIEQSHHHHQFNKPSSQSH 204
>At3g45130.1 68416.m04871 cycloartenol synthase, putative /
2,3-epoxysqualene--cycloartenol cyclase, putative /
(S)-2,3-epoxysqualene mutase, putative 77% similar to
cycloartenol synthase [SP|P38605|gi:452446] [PMID:
7505443]; oxidosqualene cyclase LcOSC2 - Luffa
cylindrica, EMBL:AB033335
Length = 748
Score = 29.5 bits (63), Expect = 9.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 417 SSNLVDLNYPQQQIFSTFKKMPEISFSDYSSI 448
+S + D +YPQQ+I F + IS+S Y +I
Sbjct: 701 NSQMEDGDYPQQEILGVFNRNCMISYSAYRNI 732
>At3g20770.1 68416.m02627 ethylene-insensitive 3 (EIN3) identical to
ethylene-insensitive3 GI:2224933 from [Arabidopsis
thaliana]
Length = 628
Score = 29.5 bits (63), Expect = 9.1
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 172 EPTRFNYTENNTFPSQEIYQNYANMPMITDTHETTADGDTKSNNPD--KNIQNQNSVNKF 229
+PT N+ E+ FP + ++ I + A+ + SNN + N N+V KF
Sbjct: 507 QPTVHNHQEHLQFPGNMVEGSFFEDLNIPNR----ANNNNSSNNQTFFQGNNNNNNVFKF 562
Query: 230 NTNENNAVQNTHN 242
+T ++N + HN
Sbjct: 563 DTADHNNFEAAHN 575
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 29.5 bits (63), Expect = 9.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 208 DGDTKSNNPDKNIQNQNSVNKFNTNENNAVQNTH 241
DG+ +NN D N N + N N N NN N +
Sbjct: 74 DGNNGNNNNDNNNNNNGNNNNDNNNGNNKDNNNN 107
>At3g13280.1 68416.m01672 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537; expression
supported by MPSS
Length = 383
Score = 29.5 bits (63), Expect = 9.1
Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 3/85 (3%)
Query: 91 TALDATDFGNNFATQAFDGVNDNDGQKSGVLQYNPNNFN-YFNSQTFENSNDDHRNIGTV 149
T +DA F FDG N G S +++ P N F S T E R + T
Sbjct: 258 TLVDAKTFKELCKMLEFDGKTCNKGNGSTMVKIRPEEGNPCFTSVTMEECMMMMRKLKTE 317
Query: 150 E--LYSEDRENPIYGTKIHKGKIRE 172
E + E+ E PI ++ + E
Sbjct: 318 EAAVEEENPEKPIQSIQVQRSSATE 342
>At1g32460.1 68414.m04006 expressed protein
Length = 92
Score = 29.5 bits (63), Expect = 9.1
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 406 PLNNIDEIVPASSNLVDLNY--PQQQIFSTFKKMPEISFSDYSSIKSFKDSQQKLND 460
P NN A +L++++Y P++ T+ + +++ S K KD +KL D
Sbjct: 4 PRNNKTSQEQARESLIEISYTSPEEDEVITYSDVKPVTYISNGSAKGNKDDAEKLRD 60
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.312 0.130 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,776,918
Number of Sequences: 28952
Number of extensions: 787460
Number of successful extensions: 1770
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1719
Number of HSP's gapped (non-prelim): 73
length of query: 790
length of database: 12,070,560
effective HSP length: 87
effective length of query: 703
effective length of database: 9,551,736
effective search space: 6714870408
effective search space used: 6714870408
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 63 (29.5 bits)
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