Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000417-TA|BGIBMGA000417-PA|undefined
(790 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 39 0.002
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 34 0.088
SPAC15A10.03c |rhp54|rad54|Rad54 homolog Rhp54|Schizosaccharomyc... 33 0.12
SPAC2E1P3.04 |||copper amine oxidase |Schizosaccharomyces pombe|... 31 0.47
SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog Rhp16|Schizo... 31 0.62
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 31 0.82
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch... 30 1.1
SPBC27B12.11c |||transcription factor |Schizosaccharomyces pombe... 30 1.4
SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated heterochr... 30 1.4
SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces pombe... 29 2.5
SPCC794.10 |||UTP-glucose-1-phosphate uridylyltransferase |Schiz... 29 2.5
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 29 3.3
SPAC31A2.10 |||RanGTP-binding protein |Schizosaccharomyces pombe... 29 3.3
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 29 3.3
SPBC776.16 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 3.3
SPAC688.13 |scn1||TatD DNase family Scn1|Schizosaccharomyces pom... 29 3.3
SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces pom... 29 3.3
SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces pom... 28 4.4
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 28 4.4
SPBC800.03 |clr3||histone deacetylase |Schizosaccharomyces pombe... 28 4.4
SPAC3A12.11c |cwf2|prp3|RNA-binding protein Cwf2|Schizosaccharom... 28 4.4
SPAC19A8.10 |rfp1|mug140|ubiquitin-protein ligase E3 Rfp1|Schizo... 28 5.8
SPBC15D4.10c |amo1||nuclear rim protein Amo1|Schizosaccharomyces... 28 5.8
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 27 7.6
SPAC4D7.10c |||SAGA complex subunit Spt20 |Schizosaccharomyces p... 27 7.6
SPBC6B1.05c |||ubiquitin-like conjugating enzyme|Schizosaccharom... 27 7.6
SPAC16A10.06c |nse2||Smc5-6 complex non-SMC subunit 2 |Schizosac... 27 7.6
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 39.1 bits (87), Expect = 0.002
Identities = 63/296 (21%), Positives = 118/296 (39%), Gaps = 24/296 (8%)
Query: 22 AKKSKKNRRPYVDEETSTPQANVISYSAFGFNDVGSYDGFMPTSADYTGFSSA----GVN 77
++KS N +P+ + TS P AN + + S P ++ G +A VN
Sbjct: 96 SEKSSTNNKPWRGDNTSKPSANSSA-------ERTSSQHQKPETSSQIGKDNAAPVENVN 148
Query: 78 QESSTRLYAPAFPTA-LDATDFGNNFATQAFDGVNDNDGQKSGVLQYNPNNFNYFNSQTF 136
++S+++ AP T + N A + V+ N KSGV Y+ + + +S T
Sbjct: 149 EKSTSQETAPPVSTVPIQFGSITRNAAIPSKPKVSGNMQNKSGVSSYSSKSQSVNSSVTS 208
Query: 137 ENSNDDHRNIGTVELYSEDRENPIYGTKIHKGKIR----EPTRFNYTE-NNTFPSQEIYQ 191
+ + E S + P T PT T+ N T P+ + Q
Sbjct: 209 NPPHTEEPVAAKPEASSTATKGPRPTTSASNTNTSPANGAPTNKPSTDINTTDPATQTTQ 268
Query: 192 -NYANMPMITDTHETTADGDTKSNNPDK-NIQNQNSVNKFNTNENNAVQNTHNPIKFQKV 249
+ +N P ++ + T ++ ++SN + N + +++ + + + +H +Q
Sbjct: 269 VSASNSPALSGS-STPSNTSSRSNRQNHGNFSEKRHYDRYGNSHPSYNKYSH----YQHG 323
Query: 250 VDFTNLKPHYPISFHSISTTTPRDIIDYGSLPHSHSGNAYENAVSENNSQMVKSGS 305
++ N + S H + R+ + G+ P S N NN Q V +GS
Sbjct: 324 FNYNNSGNNRNESGHPRFRNSRRNYNNQGAYPTYMSNGRSANQSPRNNPQNVNNGS 379
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 33.9 bits (74), Expect = 0.088
Identities = 39/186 (20%), Positives = 78/186 (41%), Gaps = 8/186 (4%)
Query: 117 KSGVLQYNPNNFNYFNSQTFENSNDDHRNIGTVELYSEDRENPIYGTKIHKGKI---REP 173
K + + N F+ F+ + ++H++ L +D E P I K +
Sbjct: 48 KDSIPHKSKNVFDDFDDGYAIDLTEEHQSSSLNNLKWKDVEGPNILKPIKKIAVPASESE 107
Query: 174 TRFNYTENNTFPSQEIYQNYANMPMITDTHETTADGDTKSNNPDKNIQNQNSVNKFNTNE 233
F+ + + E+ + P+ +T +TT T S+N +++ + ++F +
Sbjct: 108 EDFDDVDEEMLRAAEMEVFQSCQPLAVNTADTTVSHSTSSSNVPRSLNKIHDPSRF--IK 165
Query: 234 NNAVQNTHNPIKFQKVVDFTNL-KPHYPISFHSISTTTPRDIIDYGSLPHSHSGNAYENA 292
+N V+N + KV +N KP+ +S + IS T+ I+ P S N
Sbjct: 166 DNDVENRIHVSSASKVASISNTSKPNPIVSENPISATSVS--IEIPIKPKELSNNLPFPR 223
Query: 293 VSENNS 298
++ NN+
Sbjct: 224 LNNNNT 229
>SPAC15A10.03c |rhp54|rad54|Rad54 homolog Rhp54|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 852
Score = 33.5 bits (73), Expect = 0.12
Identities = 27/132 (20%), Positives = 53/132 (40%), Gaps = 3/132 (2%)
Query: 140 NDDHRNIGTVELYSEDRENPIYGTKIHKGKIREPTRFNYTENNTFPSQEIYQNYANMPMI 199
N D ++ + R + GT I + N+ S++ ++ +P++
Sbjct: 417 NSDSLTFTALDKLNVQRRVILSGTPIQNDLSEYFSLLNFANPGLLGSRQEFRKNYEIPIL 476
Query: 200 TDTHETTADGDTKSNNPDKNIQNQNSVNKFNTNENNAVQNTHNPIKFQKVVDFTNLKPHY 259
+ D K N K + VN+F N + + + P+K++ VV F NL +
Sbjct: 477 KGRDADGTEKD-KENGDAKLAELAKIVNRFIIRRTNDILSKYLPVKYEHVV-FCNLS-EF 533
Query: 260 PISFHSISTTTP 271
+S + T+P
Sbjct: 534 QLSLYKHFITSP 545
>SPAC2E1P3.04 |||copper amine oxidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 712
Score = 31.5 bits (68), Expect = 0.47
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Query: 515 HHYHSTPYENKPNYWPYGHHNPYKSSRP----KDWNNEEPNRFKSEEDLL 560
HH H TPY++ Y P G + P S P +W EEP+ D++
Sbjct: 570 HHIHVTPYKDGQIY-PAGDYVPQTSGEPTKGLPEWIAEEPDASVDNTDIV 618
>SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog
Rhp16|Schizosaccharomyces pombe|chr 3|||Manual
Length = 963
Score = 31.1 bits (67), Expect = 0.62
Identities = 42/230 (18%), Positives = 89/230 (38%), Gaps = 23/230 (10%)
Query: 100 NNFATQAFDGVNDNDGQKSGVLQYNPNNFNYFNSQTFENSNDDHRNIGTVELYSEDRENP 159
NN TQA ++ND Q +G ++ N + D+ + + E +
Sbjct: 34 NNHTTQASLQADNNDEQSNGQAPFSTTYSEINNIHDVPGNQDEWSSSPIAGIIVESEDEE 93
Query: 160 IYGTKIHKGKIREPTRFNYTENNTFPSQEIYQNYANMPMITDTHETTADGDTKSNNPDKN 219
+ +H + T N +N+ +E NM + D +GD+K N ++
Sbjct: 94 VVENNLHS---QMGTSCNKINSNSNKGKE------NMHFVLDD-----NGDSKGNASNQQ 139
Query: 220 IQNQNSVNKFNTNENNAVQNTHNPIKFQK--VVDFTNLKPHY---PISFHSISTTTPRDI 274
++ + ++ T N + P+ K ++ N + P+S ST T
Sbjct: 140 VERDDKLDMETTRWNG--KEFEEPLSTNKKLIIQSNNTSSQHSTPPLSISDTSTHTGSST 197
Query: 275 IDYGSLPHSHSGNAYENAVSENNSQMVKSGSNINGKYNFNKHININDDNA 324
+ + P++ +A + ++ +N + K ++ N+ I+DD +
Sbjct: 198 DNVEANPNTGFSSARKRSLRSSN--LKKKFVPLSSPEESNESEFIDDDES 245
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 30.7 bits (66), Expect = 0.82
Identities = 26/120 (21%), Positives = 54/120 (45%), Gaps = 8/120 (6%)
Query: 124 NPNNFNYFNSQTFENSNDDHRNIGTVELYSE--DRENPIYGTKIHKGKIREPTRFNYTEN 181
N +N + NS T N+++ N V S + G+ + NY N
Sbjct: 518 NNSNSSNNNSNTSNNNSNTSNNESMVSKLSSLSGMASSFLGSSGNNNNNNNSNSGNYNNN 577
Query: 182 NTFPS-QEIYQNYANMPMITDTHETTADGDTK----SNNPDKNIQNQNSVNKFNTNENNA 236
N+ + Q+ Q+ +++ + + ++ G++ +NN ++N N N+ N +N N N++
Sbjct: 578 NSGNNNQQHQQSSSSLQGLASSFLNSSSGNSNKQNYNNNNNQNYGNNNNQN-YNNNNNSS 636
>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1031
Score = 30.3 bits (65), Expect = 1.1
Identities = 29/142 (20%), Positives = 60/142 (42%), Gaps = 10/142 (7%)
Query: 126 NNFNYFNSQTFENSNDDHRNIGTVELYSE-DRENPI------YGTKIHKGKIREPTRFNY 178
N N Q S+DD N+ E +E + E+ + +++ KGK+ + ++
Sbjct: 208 NEPNDLRQQEESYSDDDDTNVNEFEDVNEIENEHQLSVADEDQTSRLVKGKMIFVGKEDF 267
Query: 179 TENNTFPSQE-IYQNYANMPMITDTHETTA--DGDTKSNNPDKNIQNQNSVNKFNTNENN 235
E + I QN N ++ ET++ + + + P + +QN + FN + N
Sbjct: 268 GEEADISNSVFIEQNGPNSDTVSGFKETSSIVNSSSTTEKPGVALDSQNDTSIFNEEQTN 327
Query: 236 AVQNTHNPIKFQKVVDFTNLKP 257
++ T N + + + +P
Sbjct: 328 SLTETFNDLTLDHLPENVESEP 349
>SPBC27B12.11c |||transcription factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 738
Score = 29.9 bits (64), Expect = 1.4
Identities = 27/110 (24%), Positives = 36/110 (32%), Gaps = 5/110 (4%)
Query: 188 EIYQNYANMPMITDTHETTADGDTKSNNPDKNIQNQNSVNKFNTNENNAVQNTHNPIKFQ 247
E Y +M D H + +P + + V N N NN+ NP
Sbjct: 106 EYYPRSVSMQQSQDVHFQNTEIPYYHRSPSSDSFSPGVVASVNPNSNNSPTFYSNPPALS 165
Query: 248 KVVDFTNLKPHYP--ISFHSISTTTPRDIIDYGSLPHSH---SGNAYENA 292
+ N P+ P F DI Y P+S G AY NA
Sbjct: 166 NIPIPLNNSPYRPEDAYFQLQGAGVKADINPYNLSPYSQYGPEGTAYSNA 215
>SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated
heterochromatin assembly Hrr1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1015
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 201 DTHETTADGDTKSNNPDKNIQNQNSVNKFNTNENN-AVQNT-HNPIKFQKVVDFTNLKPH 258
+T ET+ D++ N DKN++ S+ + + +N+ + N N I K +F N H
Sbjct: 64 ETSETSKTQDSEGNKVDKNLKENKSIRRKRSIDNDYELSNVKRNDITSGKNREFEN--EH 121
Query: 259 YPIS 262
+P S
Sbjct: 122 HPAS 125
>SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 565
Score = 29.1 bits (62), Expect = 2.5
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 202 THETTADGDTKSNNPDKNIQNQNSVNKFNTNENNAVQNTHNPIKF---QKVVDFTN 254
THET D ++ + P N +++N+V N + PIKF +K FTN
Sbjct: 305 THETK-DSKSEESKPSNNEKSENAVEPAKGNTMSFSWTPDKPIKFDTPEKKFTFTN 359
>SPCC794.10 |||UTP-glucose-1-phosphate uridylyltransferase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 499
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 259 YPISFHSISTTTPRDIIDYGSLPHSHSGNAYENAVS 294
Y + SI P D+IDYG LP + Y N ++
Sbjct: 69 YECDWDSIRPLGPEDMIDYGDLPLCKNAGKYLNRLA 104
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 73 SAGVNQESSTRLYAPAFPTALDATDFGNNFATQAFDGVNDNDGQKSGVLQYNPNNFNYFN 132
S + QE +T+L+A AFP ++ F + ++ ++D +K Q +N NY
Sbjct: 2354 SLQIEQELATKLFAYAFPNRNESDGFPHIYS-------RNHDKRKENGSQGEADNSNYSG 2406
Query: 133 SQTFENSNDDHRN 145
S +ND +
Sbjct: 2407 SLMRRRTNDQEED 2419
>SPAC31A2.10 |||RanGTP-binding protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 460
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/87 (20%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 218 KNIQNQNSVNKFNTNE-NNAVQNTHNPIKFQKVVDFTNLKPHYPISFHSISTTTPRDIID 276
K++ + ++ N+ + NN ++ KF + +D+ L+ ++ ++ IS + D+ D
Sbjct: 309 KDVSALDKAHQDNSEDLNNPFIKNNDKTKFHQNIDWIALEKYFEVNALDISDSESEDLSD 368
Query: 277 YGSLPHSHSGNAYENAVSENNSQMVKS 303
S GN +N + S + S
Sbjct: 369 ILSDSEFSIGNRNKNIGNNEYSAQISS 395
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 28.7 bits (61), Expect = 3.3
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 11/124 (8%)
Query: 180 ENNTFP-----SQEIYQNYANMPMITDTHETTADGDT----KSNNPDKNIQNQNSVNKFN 230
+ NT P S I ++ + + + TT++ + K +N I +Q ++ N
Sbjct: 2 DTNTLPPKPSISPSIASSFPTVKPFSSQNSTTSNPELSHIEKESNASSIIISQQPLSPSN 61
Query: 231 TNENNAVQNTHNPIKFQKVVDFTNLKPHYPISFHSISTTTPRDIIDYGSLPHSHSGNAYE 290
+ + TH K + N+ PH P S S S+++ D +D L H +
Sbjct: 62 ISSAAPLDETHIATKASASLRNNNVSPHIP-SPSSFSSSSSSD-LDKSMLDEKHPDSEDI 119
Query: 291 NAVS 294
AVS
Sbjct: 120 TAVS 123
>SPBC776.16 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 253
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/86 (20%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Query: 380 SHGKRYEYSNNNINMTFKYESNESRNPLNNIDEIVPASSNLVDLNYPQQQIFSTFKKMPE 439
S K +SN + +K + +NN+ + S N++D + + +S + +
Sbjct: 118 SKNKHPSHSNTIRSPPYKVKKESCHTEINNVSNVSTESINVIDAS----RGYSPYTSVDS 173
Query: 440 ISFSDYSSIKSFKDSQQKLNDFSNAY 465
+S S S S ++S D + A+
Sbjct: 174 LSVSKNRSFISLEESASNQYDAAEAF 199
>SPAC688.13 |scn1||TatD DNase family Scn1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 335
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
Query: 488 LPSFKKHPHFS----DDLDDEIVSIPKRNKYHH 516
+PSF HP FS DDLD ++ S R K H+
Sbjct: 54 IPSFGIHPWFSYYLYDDLDKDLQSSETRKKKHY 86
>SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1325
Score = 28.7 bits (61), Expect = 3.3
Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 7/98 (7%)
Query: 27 KNRRPYVDE--ETSTPQANVISYSAFGFNDVGSYDGFMPTSADYTGFSSAGVNQESSTRL 84
K P+V TS+P + ++ F F S+D + T A S+ V + ST
Sbjct: 466 KQASPFVKNLSSTSSPFSQSSAFGNFKFGQATSFDKGLSTDASSGAKSNTPVFGQPSTFG 525
Query: 85 YAPAF--PTAL-DATDFG--NNFATQAFDGVNDNDGQK 117
AP F P+A A FG + F +F N QK
Sbjct: 526 QAPVFGQPSAFGQAPVFGQPSAFGQSSFSFGTSNMNQK 563
>SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1188
Score = 28.3 bits (60), Expect = 4.4
Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 5/96 (5%)
Query: 144 RNIGTVELYSEDRENPIYGTKIHKGKIREPTRFNYTENNTFPSQEIYQNYANMPMITDTH 203
+++G Y +D +NP+ + + RE T T ++ F S + T
Sbjct: 983 KSMGLRRGYVKDMKNPLADQRASLDESRETT----TASSKFESDDSVDTEDEETTTDRTP 1038
Query: 204 -ETTADGDTKSNNPDKNIQNQNSVNKFNTNENNAVQ 238
E T N + +IQ +NS+ N+NE N Q
Sbjct: 1039 IECTQTVSMVDPNVNGDIQGRNSLGTMNSNERNLEQ 1074
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 224 NSVNKFNTNENNAVQNTHNPIKFQKVVDFTNLKPHYPISFHSISTTTPR 272
NS + + N N +QN +PI V DF +YP + + +TPR
Sbjct: 180 NSKSPPSENRKNRLQNVLSPIASNNVPDFNQ---NYPTESNPMFLSTPR 225
>SPBC800.03 |clr3||histone deacetylase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 687
Score = 28.3 bits (60), Expect = 4.4
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 253 TNLKPHYPISFHSISTTTPRDIIDYGSLPHSHSGNAYENAVSENNSQMVKSGSNINGKYN 312
T++KP S +++T TP I+ + P S S N N E + + KSG + +
Sbjct: 11 TSVKP----SDDAVNTVTPWSILLTNNKPMSGSENTLNNESHEMSQILKKSGLCYDPRMR 66
Query: 313 FNKHININDDN 323
F+ ++ DD+
Sbjct: 67 FHATLSEVDDH 77
>SPAC3A12.11c |cwf2|prp3|RNA-binding protein
Cwf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 388
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 114 DGQKSGVLQYNPNNFNYFNSQTFENSNDDHRNIGTVE 150
DG S Q N F SQ+ E SNDDH+++ T E
Sbjct: 316 DGANSVHNQLAANEFPN-KSQSEEGSNDDHKSVTTTE 351
>SPAC19A8.10 |rfp1|mug140|ubiquitin-protein ligase E3
Rfp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 254
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 494 HPHFSDDLDDEIVSIPKRNKYHHYHSTPYENKPNYWPYGHHNPYKSSRPKDWNNE 548
HP +++ DDE S Y + S+ K +Y P G P KS + +NN+
Sbjct: 133 HPEWTNGSDDEYFSNHFEESYDDFTSSLENIKQSYKPPG---PPKSGFTRSFNND 184
>SPBC15D4.10c |amo1||nuclear rim protein Amo1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 475
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/78 (20%), Positives = 34/78 (43%)
Query: 388 SNNNINMTFKYESNESRNPLNNIDEIVPASSNLVDLNYPQQQIFSTFKKMPEISFSDYSS 447
S+N+ + ++N S ++ S ++ P ++ + +P SFS +S
Sbjct: 229 SSNSFTGSNPVQNNPSSFGSSSFGSATSGPSAFGGISQPNSSFVNSGQGIPNSSFSSFSQ 288
Query: 448 IKSFKDSQQKLNDFSNAY 465
+ S Q +ND S+ +
Sbjct: 289 VASGFSQSQNVNDPSSIF 306
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 99 GNNFATQAFDGVNDNDGQKSGVLQYNPNNFNYFNSQTFENSND 141
GNNF F +N ++ G+ +P+ + +S T ++S +
Sbjct: 93 GNNFGFGGFPRMNRRQRRRMGIFDQSPSQIPFPSSNTEDSSEE 135
>SPAC4D7.10c |||SAGA complex subunit Spt20 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 473
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/63 (22%), Positives = 25/63 (39%)
Query: 188 EIYQNYANMPMITDTHETTADGDTKSNNPDKNIQNQNSVNKFNTNENNAVQNTHNPIKFQ 247
+ Y + +I +AD + N Q QN+ N N + NT++P +
Sbjct: 118 KFYDGCLTVRIIDHRQSPSADQTVQPQPGSTNQQQQNNTNPINNQPEDTKPNTNSPPVYH 177
Query: 248 KVV 250
V+
Sbjct: 178 TVL 180
>SPBC6B1.05c |||ubiquitin-like conjugating
enzyme|Schizosaccharomyces pombe|chr 2|||Manual
Length = 649
Score = 27.5 bits (58), Expect = 7.6
Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 13/118 (11%)
Query: 381 HGKRYEYSNNNINMTFKYESNESRNPLNNIDEIVPASSNLVDLNYPQQQIFSTFKKM-PE 439
HGK YS NI++ F + S NI + + A L++ N PQ+ + KK+ E
Sbjct: 42 HGKFNTYSRGNISIVFGEAPSNS-----NIKDCL-AEGTLLNANTPQEFTNADVKKIREE 95
Query: 440 ISFSDYSSIKSFKDSQQKLNDFSNAYRXXXXXXXXXXXYWGNTYEVTELPSFKKHPHF 497
I +SIK+ S++ YW PSFK+ PH+
Sbjct: 96 IGEVLLNSIKNGVVSERPNELLRFLIFSYADIKAYKYHYW------CLFPSFKETPHW 147
>SPAC16A10.06c |nse2||Smc5-6 complex non-SMC subunit 2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 250
Score = 27.5 bits (58), Expect = 7.6
Identities = 16/65 (24%), Positives = 24/65 (36%), Gaps = 2/65 (3%)
Query: 517 YHSTPYENKPNYWPYGHHNPYKSSRPKDWN--NEEPNRFKSEEDLLGLRNQDTSRPSYVP 574
Y YE K +Y YG Y + W+ N + + F S + + N + V
Sbjct: 110 YVDEEYEEKSDYGKYGTQGEYIEFKKTIWHEQNTDGSDFPSMKTFFNVMNTEEQEADEVM 169
Query: 575 TYKPT 579
Y T
Sbjct: 170 VYSAT 174
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.130 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,721,404
Number of Sequences: 5004
Number of extensions: 176345
Number of successful extensions: 475
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 444
Number of HSP's gapped (non-prelim): 47
length of query: 790
length of database: 2,362,478
effective HSP length: 78
effective length of query: 712
effective length of database: 1,972,166
effective search space: 1404182192
effective search space used: 1404182192
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 58 (27.5 bits)
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