Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000417-TA|BGIBMGA000417-PA|undefined
(790 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical... 39 0.016
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 35 0.26
U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-... 33 0.59
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-... 33 0.59
Z75554-3|CAA99955.2| 533|Caenorhabditis elegans Hypothetical pr... 33 0.78
U55364-5|AAQ23124.1| 368|Caenorhabditis elegans Prion-like-(q/n... 33 0.78
U55364-4|AAA97972.1| 382|Caenorhabditis elegans Prion-like-(q/n... 33 0.78
Z79756-10|CAK12562.1| 830|Caenorhabditis elegans Hypothetical p... 33 1.0
Z79756-9|CAB02122.1| 891|Caenorhabditis elegans Hypothetical pr... 33 1.0
Z79756-8|CAK12561.1| 855|Caenorhabditis elegans Hypothetical pr... 33 1.0
Z32679-3|CAA83596.1| 401|Caenorhabditis elegans Hypothetical pr... 32 1.4
U13876-13|AAA21172.3| 370|Caenorhabditis elegans Prion-like-(q/... 31 3.2
AF024501-6|AAN65317.1| 321|Caenorhabditis elegans Hypothetical ... 31 3.2
Z74043-3|CAA98546.1| 125|Caenorhabditis elegans Hypothetical pr... 30 5.5
Z74043-2|CAA98545.1| 243|Caenorhabditis elegans Hypothetical pr... 30 5.5
U23517-8|AAM98041.1| 605|Caenorhabditis elegans A kinase anchor... 30 5.5
U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor... 30 5.5
U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor... 30 5.5
AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anch... 30 5.5
U42841-13|AAC48170.1| 682|Caenorhabditis elegans Hypothetical p... 30 7.3
U41264-11|AAA82431.2| 550|Caenorhabditis elegans Hypothetical p... 30 7.3
AY037802-1|AAK94767.1| 669|Caenorhabditis elegans GLY-2 protein. 30 7.3
AY037800-1|AAK94765.1| 661|Caenorhabditis elegans GLY-2 protein. 30 7.3
AF154122-1|AAF74523.1| 669|Caenorhabditis elegans N-acetylgluco... 30 7.3
AF100307-3|AAC68932.1| 207|Caenorhabditis elegans Hypothetical ... 30 7.3
AC006625-9|AAK68273.1| 669|Caenorhabditis elegans Glycosylation... 30 7.3
Z69902-4|CAA93763.1| 410|Caenorhabditis elegans Hypothetical pr... 29 9.6
Z68005-1|CAA91991.1| 1199|Caenorhabditis elegans Hypothetical pr... 29 9.6
U50066-1|AAA93437.2| 378|Caenorhabditis elegans Resistance to i... 29 9.6
U41542-2|AAR30212.1| 623|Caenorhabditis elegans Suppressor of p... 29 9.6
AL132862-12|CAB60542.1| 380|Caenorhabditis elegans Hypothetical... 29 9.6
AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical ... 29 9.6
AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical ... 29 9.6
>AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical
protein Y73F8A.16 protein.
Length = 396
Score = 38.7 bits (86), Expect = 0.016
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
Query: 208 DGDTKSNNPDKNIQNQNSVNKFNTNENNAVQNTHNPIKFQKVVDFTNLKPH--YPISFHS 265
D TK N KN+Q +SV +F N+ +N H V F N P+ YP +
Sbjct: 290 DPKTKQNRVAKNVQYLSSVPQFAINQK---ENIHQNAPDYPVSQFPNQYPYGSYPYYYPY 346
Query: 266 ISTTTPRDIIDYGSLPHSHSGNAYENAVSENNSQMVKSGSNINGKY 311
++ ++Y +S ++++++ S NS ++G+ I+ Y
Sbjct: 347 FQSSQQFPHLNYSMNNSIYSDSSFQSSFSAENSYFDENGNPIHYPY 392
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical
protein C32E12.4 protein.
Length = 1553
Score = 34.7 bits (76), Expect = 0.26
Identities = 31/154 (20%), Positives = 56/154 (36%), Gaps = 1/154 (0%)
Query: 285 SGNAYENAVSENNSQMVKSGSNINGKYNF-NKHININDDNAIFSNHYSLNSVTXXXXXXX 343
SG N+ S + V++GS G Y+ + ++ FS + NSV+
Sbjct: 67 SGGNSSNSTSSYTPRNVRAGSVSIGAYDPPTSRADSVSSSSTFSRYRPDNSVSSTSTYTP 126
Query: 344 XYXXXXXXXXXXXXXXXXXWFLNKNSTGNIRNWKDLSHGKRYEYSNNNINMTFKYESNES 403
+ + +++ + R +S G YSN++ + Y S S
Sbjct: 127 SLSRYRSTDLSSTSDYSSTKYRSPDNSYSSRRSSTISSGNSNRYSNSHKTPSSVYSSRTS 186
Query: 404 RNPLNNIDEIVPASSNLVDLNYPQQQIFSTFKKM 437
+ D + S D +I STF+K+
Sbjct: 187 TSSSYRSDRDYRSMSRATDNEDEVDEIESTFRKL 220
>U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform b protein.
Length = 1169
Score = 33.5 bits (73), Expect = 0.59
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 68 YTGFSSAGVNQESSTRLYAPAFPTALDATDF--GNNFATQAFDGVNDNDGQKSGVLQYNP 125
+ FS N+ + + P F + DF NNF G N N + +NP
Sbjct: 151 FNSFSGGNGNRNNQNNGFMP-FGQPSELPDFQPNNNFKYGNNFGQNQNSNNNNNDFNWNP 209
Query: 126 NNFNYFNSQTFENSN 140
NFN+ N+Q N+N
Sbjct: 210 -NFNWNNNQNNNNNN 223
>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform a protein.
Length = 1876
Score = 33.5 bits (73), Expect = 0.59
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 68 YTGFSSAGVNQESSTRLYAPAFPTALDATDF--GNNFATQAFDGVNDNDGQKSGVLQYNP 125
+ FS N+ + + P F + DF NNF G N N + +NP
Sbjct: 151 FNSFSGGNGNRNNQNNGFMP-FGQPSELPDFQPNNNFKYGNNFGQNQNSNNNNNDFNWNP 209
Query: 126 NNFNYFNSQTFENSN 140
NFN+ N+Q N+N
Sbjct: 210 -NFNWNNNQNNNNNN 223
>Z75554-3|CAA99955.2| 533|Caenorhabditis elegans Hypothetical
protein ZC455.4 protein.
Length = 533
Score = 33.1 bits (72), Expect = 0.78
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 365 LNKNSTGNIRNWKDLSHGKRYEYSNNNINMTF 396
++K + G +++WKD+ H Y +SN+N + F
Sbjct: 233 VSKLTNGKVKHWKDIIHDVTYHFSNSNPYLDF 264
>U55364-5|AAQ23124.1| 368|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 31,
isoform b protein.
Length = 368
Score = 33.1 bits (72), Expect = 0.78
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 4/100 (4%)
Query: 100 NNFATQA-FDGVNDNDGQKSGVLQYNPNNFNYFNSQTFENSNDDHRNIGTVELYSEDREN 158
NN+ TQA +D + GQ V Y+ N ++ NSQ ++ + ++ YS + N
Sbjct: 104 NNYGTQAQYDAGQNQMGQSGQVQGYSNNGYSNQNSQMSQSQASSGSSSVSLMDYSFNNGN 163
Query: 159 PIY--GTKIHKGKIREPTRFNYTENNTF-PSQEIYQNYAN 195
Y G I G+ R+ T+ + + S + Y N N
Sbjct: 164 CQYKDGQVIENGQTRQATQQELQQIQQYRNSVDQYMNQVN 203
>U55364-4|AAA97972.1| 382|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 31,
isoform a protein.
Length = 382
Score = 33.1 bits (72), Expect = 0.78
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 4/100 (4%)
Query: 100 NNFATQA-FDGVNDNDGQKSGVLQYNPNNFNYFNSQTFENSNDDHRNIGTVELYSEDREN 158
NN+ TQA +D + GQ V Y+ N ++ NSQ ++ + ++ YS + N
Sbjct: 118 NNYGTQAQYDAGQNQMGQSGQVQGYSNNGYSNQNSQMSQSQASSGSSSVSLMDYSFNNGN 177
Query: 159 PIY--GTKIHKGKIREPTRFNYTENNTF-PSQEIYQNYAN 195
Y G I G+ R+ T+ + + S + Y N N
Sbjct: 178 CQYKDGQVIENGQTRQATQQELQQIQQYRNSVDQYMNQVN 217
>Z79756-10|CAK12562.1| 830|Caenorhabditis elegans Hypothetical
protein F53C11.5c protein.
Length = 830
Score = 32.7 bits (71), Expect = 1.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 521 PYENKPNYWPYGHHNPYKSSRP 542
P+ N P Y+PYGHH P + P
Sbjct: 34 PHPNAPMYYPYGHHAPSHAPMP 55
>Z79756-9|CAB02122.1| 891|Caenorhabditis elegans Hypothetical
protein F53C11.5b protein.
Length = 891
Score = 32.7 bits (71), Expect = 1.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 521 PYENKPNYWPYGHHNPYKSSRP 542
P+ N P Y+PYGHH P + P
Sbjct: 95 PHPNAPMYYPYGHHAPSHAPMP 116
>Z79756-8|CAK12561.1| 855|Caenorhabditis elegans Hypothetical
protein F53C11.5a protein.
Length = 855
Score = 32.7 bits (71), Expect = 1.0
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 521 PYENKPNYWPYGHHNPYKSSRP 542
P+ N P Y+PYGHH P + P
Sbjct: 59 PHPNAPMYYPYGHHAPSHAPMP 80
>Z32679-3|CAA83596.1| 401|Caenorhabditis elegans Hypothetical
protein C05B5.3 protein.
Length = 401
Score = 32.3 bits (70), Expect = 1.4
Identities = 39/190 (20%), Positives = 70/190 (36%), Gaps = 9/190 (4%)
Query: 56 GSYDGFMPTSADYTGFSSAGVNQESSTRLYAPAFPTALDATDFGNNFATQAFDGVNDNDG 115
G +G +P S+ + + S + Y + T T G NF G N N G
Sbjct: 94 GQINGNVPGSSSSNQQPVIYIARAGSDK-YKNSEVTTSTPTPNGFNFGNGFQGGQNQNTG 152
Query: 116 QKSGVLQYNPNNFNYFNSQTFENSNDDHRNIGTVELYSEDRENPIYGTKIHKGKIREPTR 175
SG +N N N N +N+ ++N+G + ++ + ++ PT
Sbjct: 153 FSSGF--FNNQNQNS-NQNLNQNNFQQNQNLGASSGFFNNQNQQ----NSQQNQVNGPTS 205
Query: 176 FNYTENNTFPSQEIYQNYANMPMITDTHETTADGDTKSNNPDKNIQNQNSVNKFNTNENN 235
+ + + + N + +G + N QNQN F N+NN
Sbjct: 206 GFSNQQTSNQNSGFFNNQNQQNGQNFGNSGNQNGVNPYSGAFSNGQNQNQQGFFGNNQNN 265
Query: 236 AVQNTHNPIK 245
QN++ ++
Sbjct: 266 Q-QNSNGQVQ 274
>U13876-13|AAA21172.3| 370|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 46
protein.
Length = 370
Score = 31.1 bits (67), Expect = 3.2
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 287 NAYENAVSENNSQMVKSGSNINGKYNFNKHININDDN 323
N Y N + NN+Q + +N N YN N + N N+ N
Sbjct: 60 NGYNNNYNNNNNQQQQFYNNNNNNYNNNNYNNNNNYN 96
Score = 29.5 bits (63), Expect = 9.6
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Query: 277 YGSLPHSHSGNAYENAVSENNSQMVKSGSNINGKYNFNKHININDDNAIFSNH 329
YG GN Y N + NN + NG YN N + N N ++N+
Sbjct: 29 YGYPQQQQQGNQYYNNNNNNNGYYNQQQQQFNG-YNNNYNNNNNQQQQFYNNN 80
>AF024501-6|AAN65317.1| 321|Caenorhabditis elegans Hypothetical
protein F39E9.11 protein.
Length = 321
Score = 31.1 bits (67), Expect = 3.2
Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 388 SNNNINMTFKYESNESRNPLNNIDEIVPASSNLVDLNYPQQQIFSTFKKMPEISFSDYSS 447
+N+ IN T+K+E +E+ N +IDEI + +D+ + + Q+ F+ +F+ +
Sbjct: 57 NNSQINFTWKFEYDEAGN--EDIDEI----AGTIDVKFRRNQVSGMFQTGQNQNFTTVHT 110
Query: 448 IKSFKDSQQKL 458
+ S + Q L
Sbjct: 111 LVSLTEHCQTL 121
>Z74043-3|CAA98546.1| 125|Caenorhabditis elegans Hypothetical
protein T19B10.4b protein.
Length = 125
Score = 30.3 bits (65), Expect = 5.5
Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 3/61 (4%)
Query: 202 THETTADGDTKSNNPDKNIQNQNSVNKFNTNENNAVQNT--HNPIKFQKVVDFTNLKPHY 259
T+ SNN K NQN+ N N N N QN H P Q V F + P
Sbjct: 21 TNNNNKKAGNNSNNQKKG-NNQNNKNNKNQNGGNRNQNRQHHQPPMMQMVPPFGPMGPGG 79
Query: 260 P 260
P
Sbjct: 80 P 80
>Z74043-2|CAA98545.1| 243|Caenorhabditis elegans Hypothetical
protein T19B10.4a protein.
Length = 243
Score = 30.3 bits (65), Expect = 5.5
Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 3/61 (4%)
Query: 202 THETTADGDTKSNNPDKNIQNQNSVNKFNTNENNAVQNT--HNPIKFQKVVDFTNLKPHY 259
T+ SNN K NQN+ N N N N QN H P Q V F + P
Sbjct: 21 TNNNNKKAGNNSNNQKKG-NNQNNKNNKNQNGGNRNQNRQHHQPPMMQMVPPFGPMGPGG 79
Query: 260 P 260
P
Sbjct: 80 P 80
>U23517-8|AAM98041.1| 605|Caenorhabditis elegans A kinase anchor
protein protein1, isoform c protein.
Length = 605
Score = 30.3 bits (65), Expect = 5.5
Identities = 16/64 (25%), Positives = 27/64 (42%)
Query: 176 FNYTENNTFPSQEIYQNYANMPMITDTHETTADGDTKSNNPDKNIQNQNSVNKFNTNENN 235
FN +N E M + + +E + + S+ +KN+QN+ +F N
Sbjct: 291 FNADNHNYLSEPENSSKKERMQSVAEENEASEEPTQSSSETEKNLQNEKIDVEFIENSEA 350
Query: 236 AVQN 239
VQN
Sbjct: 351 IVQN 354
>U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor
protein protein1, isoform b protein.
Length = 1284
Score = 30.3 bits (65), Expect = 5.5
Identities = 16/64 (25%), Positives = 27/64 (42%)
Query: 176 FNYTENNTFPSQEIYQNYANMPMITDTHETTADGDTKSNNPDKNIQNQNSVNKFNTNENN 235
FN +N E M + + +E + + S+ +KN+QN+ +F N
Sbjct: 291 FNADNHNYLSEPENSSKKERMQSVAEENEASEEPTQSSSETEKNLQNEKIDVEFIENSEA 350
Query: 236 AVQN 239
VQN
Sbjct: 351 IVQN 354
>U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein1, isoform a protein.
Length = 1280
Score = 30.3 bits (65), Expect = 5.5
Identities = 16/64 (25%), Positives = 27/64 (42%)
Query: 176 FNYTENNTFPSQEIYQNYANMPMITDTHETTADGDTKSNNPDKNIQNQNSVNKFNTNENN 235
FN +N E M + + +E + + S+ +KN+QN+ +F N
Sbjct: 291 FNADNHNYLSEPENSSKKERMQSVAEENEASEEPTQSSSETEKNLQNEKIDVEFIENSEA 350
Query: 236 AVQN 239
VQN
Sbjct: 351 IVQN 354
>AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein.
Length = 1280
Score = 30.3 bits (65), Expect = 5.5
Identities = 16/64 (25%), Positives = 27/64 (42%)
Query: 176 FNYTENNTFPSQEIYQNYANMPMITDTHETTADGDTKSNNPDKNIQNQNSVNKFNTNENN 235
FN +N E M + + +E + + S+ +KN+QN+ +F N
Sbjct: 291 FNADNHNYLSEPENSSKKERMQSVAEENEASEEPTQSSSETEKNLQNEKIDVEFIENSEA 350
Query: 236 AVQN 239
VQN
Sbjct: 351 IVQN 354
>U42841-13|AAC48170.1| 682|Caenorhabditis elegans Hypothetical
protein T17H7.1 protein.
Length = 682
Score = 29.9 bits (64), Expect = 7.3
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 171 REPTRFNYTENNTFPSQEIYQNYANMPMITDTHETTADGDTKSNNPDKNIQN 222
R+P +F+ + ++ PSQ+ +Q N M D +++ G KS + +N +N
Sbjct: 629 RQPRQFDDADTSSAPSQKYFQRQMNSGMRFD--QSSGFGMRKSQSTQQNYEN 678
>U41264-11|AAA82431.2| 550|Caenorhabditis elegans Hypothetical
protein F10E7.1 protein.
Length = 550
Score = 29.9 bits (64), Expect = 7.3
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 373 IRNWKDLSHGKRYEYSNNNINMTFKYESNESRNPLNNIDEIVPASSN 419
++ WK R Y+N N+++ +ESN + LN +++I S N
Sbjct: 504 VKIWKGNKFCVRNAYTNCNVDIDLYFESNLLKKVLNTLNKIESQSIN 550
>AY037802-1|AAK94767.1| 669|Caenorhabditis elegans GLY-2 protein.
Length = 669
Score = 29.9 bits (64), Expect = 7.3
Identities = 15/58 (25%), Positives = 26/58 (44%)
Query: 397 KYESNESRNPLNNIDEIVPASSNLVDLNYPQQQIFSTFKKMPEISFSDYSSIKSFKDS 454
+Y ++ P++ + IV S + DL+ I S FKK+ F + I D+
Sbjct: 380 QYMWRDAEKPIDVLKRIVTVHSTVADLDLKDSNISSIFKKVQNHGFLNSEEISQLLDN 437
>AY037800-1|AAK94765.1| 661|Caenorhabditis elegans GLY-2 protein.
Length = 661
Score = 29.9 bits (64), Expect = 7.3
Identities = 15/58 (25%), Positives = 26/58 (44%)
Query: 397 KYESNESRNPLNNIDEIVPASSNLVDLNYPQQQIFSTFKKMPEISFSDYSSIKSFKDS 454
+Y ++ P++ + IV S + DL+ I S FKK+ F + I D+
Sbjct: 372 QYMWRDAEKPIDVLKRIVTVHSTVADLDLKDSNISSIFKKVQNHGFLNSEEISQLLDN 429
>AF154122-1|AAF74523.1| 669|Caenorhabditis elegans
N-acetylglucosaminyltransferase V protein.
Length = 669
Score = 29.9 bits (64), Expect = 7.3
Identities = 15/58 (25%), Positives = 26/58 (44%)
Query: 397 KYESNESRNPLNNIDEIVPASSNLVDLNYPQQQIFSTFKKMPEISFSDYSSIKSFKDS 454
+Y ++ P++ + IV S + DL+ I S FKK+ F + I D+
Sbjct: 380 QYMWRDAEKPIDVLKRIVTVHSTVADLDLKDSNISSIFKKVQNHGFLNSEEISQLLDN 437
>AF100307-3|AAC68932.1| 207|Caenorhabditis elegans Hypothetical
protein T12B5.7 protein.
Length = 207
Score = 29.9 bits (64), Expect = 7.3
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 198 MITDTHETTADGDTKSNNPDKNIQ----NQNSVNKFNTNENNAVQNTHNPIKFQKVVDFT 253
MI + HE DG+ K+ + + + FN+N++N V + +KF+ +
Sbjct: 83 MIHNGHEKLIDGENFVERAGKDFKIVSKHAQKIEIFNSNDDNIVTTLNEFLKFETCILVK 142
Query: 254 NLKPHYPISFHSISTTTPR 272
++K + +S + T PR
Sbjct: 143 DVK-LWNLSLDDVLTNLPR 160
>AC006625-9|AAK68273.1| 669|Caenorhabditis elegans Glycosylation
related protein 2 protein.
Length = 669
Score = 29.9 bits (64), Expect = 7.3
Identities = 15/58 (25%), Positives = 26/58 (44%)
Query: 397 KYESNESRNPLNNIDEIVPASSNLVDLNYPQQQIFSTFKKMPEISFSDYSSIKSFKDS 454
+Y ++ P++ + IV S + DL+ I S FKK+ F + I D+
Sbjct: 380 QYMWRDAEKPIDVLKRIVTVHSTVADLDLKDSNISSIFKKVQNHGFLNSEEISQLLDN 437
>Z69902-4|CAA93763.1| 410|Caenorhabditis elegans Hypothetical
protein C47D12.5 protein.
Length = 410
Score = 29.5 bits (63), Expect = 9.6
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 282 HSHSGNAYENAVSENNSQMVKSGSNINGKYNFNKHININDDNAIFSNHYSLNSVT 336
H NA+E + + + Q++ S ++ F + + N +FSNH S S+T
Sbjct: 221 HEEDENAFEGIMMDCSDQLIVSSPDLPQGIQFTNY----NQNGVFSNHRSNLSIT 271
>Z68005-1|CAA91991.1| 1199|Caenorhabditis elegans Hypothetical
protein F59F3.5 protein.
Length = 1199
Score = 29.5 bits (63), Expect = 9.6
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 387 YSNNNINMT--FKYESNESRNPLNNIDEIVPASSNLVDLNYPQQQIFSTFKKMPEISFSD 444
Y NN ++T Y ++S PLN+ + ++ N D Y Q K+ + F D
Sbjct: 224 YVGNNYSITCHLVYIGSDSLRPLNHQEIVLECPQNQCDGGYNNQSAHEIEKRSSGLRFGD 283
Query: 445 YSS 447
SS
Sbjct: 284 PSS 286
>U50066-1|AAA93437.2| 378|Caenorhabditis elegans Resistance to
inhibitors of cholinesteraseprotein 3 protein.
Length = 378
Score = 29.5 bits (63), Expect = 9.6
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 6 IYILFIALFYLY--ISAEAKKSKKNRRPYVDEE 36
+Y + + LF LY ++ KKSK+ +R Y D E
Sbjct: 133 VYTIGVVLFLLYTLFKSKGKKSKRKKRNYFDSE 165
>U41542-2|AAR30212.1| 623|Caenorhabditis elegans Suppressor of
presenilin defectprotein 3, isoform b protein.
Length = 623
Score = 29.5 bits (63), Expect = 9.6
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Query: 212 KSNNPDKNIQNQNSVNKFNTNENNAVQNTH--NPIKFQKVVDFTNLKPHYP 260
KS NP I NS N+ N+++ +K K DF N+KP P
Sbjct: 409 KSVNPLHQINKNNSNPTVLPNKRNSIKTNQFQQSVKVPKYEDFLNMKPVMP 459
>AL132862-12|CAB60542.1| 380|Caenorhabditis elegans Hypothetical
protein Y73F8A.17 protein.
Length = 380
Score = 29.5 bits (63), Expect = 9.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 376 WKDLSHGKRYEYSNNNINMTFKYESNES 403
+ L HG Y+Y NN+IN ++S+ S
Sbjct: 332 YSQLDHGSPYQYMNNSINSDSSFQSSFS 359
>AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical
protein Y38E10A.6b protein.
Length = 1345
Score = 29.5 bits (63), Expect = 9.6
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 189 IYQNYANMPMITDTHETTADGDTKSNNPDKNIQN----QNSVNKFNTN-ENNAVQNTHNP 243
++++Y PM+ D + + K+ P K+I N +N E+++V P
Sbjct: 776 LHESYERCPMLGD--DVRYNLALKTFLPPKSITNFFINRNRKTAIKMRAESSSVDGEAEP 833
Query: 244 IKFQKVVDFTNLKPHYPISFHSISTTTPRDIIDYGSLPHSHSGNAYENA--VSENNSQ 299
+F NL+ PI S+ PR + D+GS P + E A + +N S+
Sbjct: 834 PNNDGFYEF-NLEEPAPILRKSLRKPVPRILGDFGSYPEKNGSETAEKAQILKKNGSE 890
>AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical
protein Y38E10A.6a protein.
Length = 1343
Score = 29.5 bits (63), Expect = 9.6
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 189 IYQNYANMPMITDTHETTADGDTKSNNPDKNIQN----QNSVNKFNTN-ENNAVQNTHNP 243
++++Y PM+ D + + K+ P K+I N +N E+++V P
Sbjct: 774 LHESYERCPMLGD--DVRYNLALKTFLPPKSITNFFINRNRKTAIKMRAESSSVDGEAEP 831
Query: 244 IKFQKVVDFTNLKPHYPISFHSISTTTPRDIIDYGSLPHSHSGNAYENA--VSENNSQ 299
+F NL+ PI S+ PR + D+GS P + E A + +N S+
Sbjct: 832 PNNDGFYEF-NLEEPAPILRKSLRKPVPRILGDFGSYPEKNGSETAEKAQILKKNGSE 888
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.312 0.130 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,158,213
Number of Sequences: 27539
Number of extensions: 875515
Number of successful extensions: 2076
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 2036
Number of HSP's gapped (non-prelim): 70
length of query: 790
length of database: 12,573,161
effective HSP length: 87
effective length of query: 703
effective length of database: 10,177,268
effective search space: 7154619404
effective search space used: 7154619404
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 63 (29.5 bits)
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