Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000416-TA|BGIBMGA000416-PA|IPR009533|Protein of unknown
function DUF1151
         (194 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   3.4  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   4.4  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   5.9  
AY340960-1|AAQ16586.1|   78|Apis mellifera apisimin precursor pr...    21   5.9  
AY055108-1|AAL15544.1|   78|Apis mellifera apisimin precursor pr...    21   5.9  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   5.9  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    21   7.8  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 11/37 (29%), Positives = 22/37 (59%)

Query: 104 RIGKNVLNQKSELEKALSKHKEKQILNQMREQQHKDA 140
           +IGK V  + SEL ++  +H  +++L  + + +  DA
Sbjct: 254 KIGKMVNQKFSELIQSKPQHARRKVLAGIVQTKGSDA 290


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/49 (20%), Positives = 26/49 (53%)

Query: 88  ESPQRMDLHRELLFNQRIGKNVLNQKSELEKALSKHKEKQILNQMREQQ 136
           E  Q+M   ++    Q+  ++V+N +   ++   + +++Q   Q ++QQ
Sbjct: 413 EQQQQMQAQQQHQQQQQQTQHVINAQQPQQQQQQQQQQQQQQQQQQQQQ 461


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/18 (38%), Positives = 10/18 (55%)

Query: 6   VGFFGGLKTSWKSSEKCF 23
           VG FGG   SW+   + +
Sbjct: 165 VGVFGGSAWSWREERQAY 182


>AY340960-1|AAQ16586.1|   78|Apis mellifera apisimin precursor
          protein.
          Length = 78

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 10/18 (55%), Positives = 14/18 (77%)

Query: 48 LVSTLVSEANLGAVDMVQ 65
          LVS++VS AN+ AV + Q
Sbjct: 45 LVSSIVSGANVSAVLLAQ 62


>AY055108-1|AAL15544.1|   78|Apis mellifera apisimin precursor
          protein.
          Length = 78

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 10/18 (55%), Positives = 14/18 (77%)

Query: 48 LVSTLVSEANLGAVDMVQ 65
          LVS++VS AN+ AV + Q
Sbjct: 45 LVSSIVSGANVSAVLLAQ 62


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/18 (38%), Positives = 10/18 (55%)

Query: 6   VGFFGGLKTSWKSSEKCF 23
           VG FGG   SW+   + +
Sbjct: 165 VGVFGGSAWSWREERQAY 182


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 6/13 (46%), Positives = 12/13 (92%)

Query: 43  GGGVDLVSTLVSE 55
           GGG++L+S ++S+
Sbjct: 128 GGGIELISHIISK 140


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.311    0.130    0.362 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,803
Number of Sequences: 429
Number of extensions: 1546
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 194
length of database: 140,377
effective HSP length: 54
effective length of query: 140
effective length of database: 117,211
effective search space: 16409540
effective search space used: 16409540
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 42 (21.0 bits)