GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000416-TA|BGIBMGA000416-PA|IPR009533|Protein of unknown
function DUF1151
         (194 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       25   0.52 
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    25   0.52 
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    25   0.52 
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    21   6.5  

>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 24.6 bits (51), Expect = 0.52
 Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 2/47 (4%)

Query: 91  QRMDLHRELLFNQRIGKNVLNQKSELEKALSKHKEKQILNQMREQQH 137
           +RM L +EL   + I +    ++ E E+   + +EKQ   ++ +Q H
Sbjct: 57  RRMKLKKELRAVKEINEQARREREEQERHKQQQQEKQ--QKIEQQTH 101


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 24.6 bits (51), Expect = 0.52
 Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 2/47 (4%)

Query: 91  QRMDLHRELLFNQRIGKNVLNQKSELEKALSKHKEKQILNQMREQQH 137
           +RM L +EL   + I +    ++ E E+   + +EKQ   ++ +Q H
Sbjct: 208 RRMKLKKELRAVKEINEQARREREEQERHKQQQQEKQ--QKIEQQTH 252


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 24.6 bits (51), Expect = 0.52
 Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 2/47 (4%)

Query: 91  QRMDLHRELLFNQRIGKNVLNQKSELEKALSKHKEKQILNQMREQQH 137
           +RM L +EL   + I +    ++ E E+   + +EKQ   ++ +Q H
Sbjct: 267 RRMKLKKELRAVKEINEQARREREEQERHKQQQQEKQ--QKIEQQTH 311


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
          protein 5 protein.
          Length = 144

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/10 (80%), Positives = 9/10 (90%)

Query: 1  MKTFVVGFFG 10
          MKTFV+ FFG
Sbjct: 1  MKTFVILFFG 10


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.311    0.130    0.362 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,467
Number of Sequences: 317
Number of extensions: 1120
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 194
length of database: 114,650
effective HSP length: 54
effective length of query: 140
effective length of database: 97,532
effective search space: 13654480
effective search space used: 13654480
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.4 bits)
S2: 41 (20.6 bits)