GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000416-TA|BGIBMGA000416-PA|IPR009533|Protein of unknown
function DUF1151
         (194 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    25   1.1  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   6.0  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   6.0  
DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.       23   8.0  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   8.0  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   8.0  

>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 15/48 (31%), Positives = 23/48 (47%)

Query: 81  RLPNPCLESPQRMDLHRELLFNQRIGKNVLNQKSELEKALSKHKEKQI 128
           RL   CL + +R+ L  +L     +  +    K  LEKA+   K +QI
Sbjct: 311 RLRGICLAARERLRLITDLQERSFVAADHRTAKRNLEKAIRASKRQQI 358


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 9/28 (32%), Positives = 21/28 (75%)

Query: 112 QKSELEKALSKHKEKQILNQMREQQHKD 139
           QK +L++ LSK+++ ++  + +EQ+ K+
Sbjct: 655 QKRDLQEQLSKYQQTKMKVKRQEQKCKE 682


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 80  RRLPNPCLESPQRMDLHRELLFNQRIGKNVLNQKSELEKAL 120
           R +P+P  +  Q+   H      Q +GKN L  ++  E+ L
Sbjct: 772 RIVPSPNQQQQQQHHHHHLQQQQQIVGKNTLYSRNSSERML 812


>DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.
          Length = 595

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 11/42 (26%), Positives = 18/42 (42%)

Query: 85  PCLESPQRMDLHRELLFNQRIGKNVLNQKSELEKALSKHKEK 126
           P     Q   LH      +++  +V N  +++  ALS  K K
Sbjct: 7   PAAADQQANRLHAPTANTKKVSDSVTNLAAKIANALSNQKSK 48


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 10/17 (58%), Positives = 13/17 (76%)

Query: 66  EGESGAGSESLIAPRRL 82
           E ESGAGS   I+P+R+
Sbjct: 133 ESESGAGSIVQISPQRV 149


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 13/46 (28%), Positives = 20/46 (43%)

Query: 82  LPNPCLESPQRMDLHRELLFNQRIGKNVLNQKSELEKALSKHKEKQ 127
           L N C+ + +RM L  +L             K+ LEKA+   K  +
Sbjct: 320 LRNECIAARERMRLTTDLQERSLAAAEHRTAKTRLEKAIKVGKRAE 365


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.311    0.130    0.362 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,760
Number of Sequences: 2123
Number of extensions: 5305
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 13
Number of HSP's gapped (non-prelim): 6
length of query: 194
length of database: 516,269
effective HSP length: 61
effective length of query: 133
effective length of database: 386,766
effective search space: 51439878
effective search space used: 51439878
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 46 (22.6 bits)