Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000415-TA|BGIBMGA000415-PA|IPR009091|Regulator of
chromosome condensation/beta-lactamase-inhibitor protein II,
IPR000408|Regulator of chromosome condensation, RCC1
(993 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g63860.1 68418.m08016 UVB-resistance protein (UVR8) identical... 124 3e-28
At5g19420.1 68418.m02314 zinc finger protein, putative / regulat... 105 1e-22
At5g12350.1 68418.m01453 zinc finger protein, putative / regulat... 101 2e-21
At4g14370.1 68417.m02214 disease resistance protein (TIR-NBS-LRR... 99 7e-21
At1g69710.1 68414.m08022 zinc finger protein, putative / regulat... 97 7e-20
At1g76950.1 68414.m08958 zinc finger protein (PRAF1) / regulator... 96 9e-20
At5g08710.1 68418.m01035 regulator of chromosome condensation (R... 96 1e-19
At3g55580.1 68416.m06171 regulator of chromosome condensation (R... 95 3e-19
At3g23270.1 68416.m02933 regulator of chromosome condensation (R... 95 3e-19
At5g60870.2 68418.m07635 regulator of chromosome condensation (R... 92 1e-18
At5g60870.1 68418.m07636 regulator of chromosome condensation (R... 92 1e-18
At3g02510.1 68416.m00239 regulator of chromosome condensation (R... 92 1e-18
At5g16040.1 68418.m01875 regulator of chromosome condensation (R... 91 3e-18
At5g42140.1 68418.m05130 zinc finger protein, putative / regulat... 90 8e-18
At3g53830.1 68416.m05947 regulator of chromosome condensation (R... 89 2e-17
At3g47660.1 68416.m05188 regulator of chromosome condensation (R... 87 5e-17
At3g15430.2 68416.m01958 regulator of chromosome condensation (R... 85 2e-16
At3g15430.1 68416.m01957 regulator of chromosome condensation (R... 85 2e-16
At1g27060.1 68414.m03299 regulator of chromosome condensation (R... 84 4e-16
At3g03790.2 68416.m00389 ankyrin repeat family protein / regulat... 81 5e-15
At3g03790.1 68416.m00388 ankyrin repeat family protein / regulat... 81 5e-15
At1g65920.1 68414.m07480 regulator of chromosome condensation (R... 79 1e-14
At3g02300.1 68416.m00212 regulator of chromosome condensation (R... 78 3e-14
At5g11580.1 68418.m01350 UVB-resistance protein-related / regula... 77 4e-14
At5g48330.1 68418.m05970 regulator of chromosome condensation (R... 76 1e-13
At1g19880.1 68414.m02493 regulator of chromosome condensation (R... 73 1e-12
At3g26100.2 68416.m03250 regulator of chromosome condensation (R... 68 4e-11
At3g26100.1 68416.m03251 regulator of chromosome condensation (R... 68 4e-11
At1g54360.2 68414.m06198 expressed protein 33 0.94
At1g54360.1 68414.m06197 expressed protein 33 0.94
At2g16940.1 68415.m01952 RNA recognition motif (RRM)-containing ... 31 3.8
At5g43450.1 68418.m05312 2-oxoglutarate-dependent dioxygenase, p... 30 6.7
At3g55950.1 68416.m06217 protein kinase family protein contains ... 30 8.8
At2g01150.1 68415.m00024 zinc finger (C3HC4-type RING finger) fa... 30 8.8
>At5g63860.1 68418.m08016 UVB-resistance protein (UVR8) identical to
UVB-resistance protein UVR8 (GI:5478530, GB:AAD43920.1)
[Arabidopsis thaliana]; contains Pfam 00415: Regulator
of chromosome condensation (RCC1)
Length = 440
Score = 124 bits (299), Expect = 3e-28
Identities = 88/306 (28%), Positives = 137/306 (44%), Gaps = 31/306 (10%)
Query: 322 GLAHWAVVSDGNARVMMASTPVNTELIGRVIDVACGRHHTLILTENG-LYSAGDNTFGQL 380
G + + GN+ + P+ R+ +ACG H L +T G + S G N GQL
Sbjct: 93 GWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQL 152
Query: 381 XXXXXXXXXXXXXXXXXXXVLRVRLAGGAPLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQ 440
+++ G + VAAG H+AAV G L WGWG +G
Sbjct: 153 GLGDTEDSLVPQ---------KIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGN 203
Query: 441 LGLGNIDDQWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQRGK 500
LGLG+ D+ P+ VT G K+ V CG H++ ++ G L+ G S +GQLG G
Sbjct: 204 LGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLED 263
Query: 501 ASLPVRV-ALHEP-VRALAAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPT- 557
+P ++ AL + ++ G+ H +ALT G++Y WG + + + SP
Sbjct: 264 HLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWN--KFGQVGVGNNLDQCSPVQ 321
Query: 558 LPFHDDNDRYLAPSCVDTTNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDR 617
+ F DD ++VQ+S GW H+ + +++ WG +GQLG G+
Sbjct: 322 VRFPDDQ----------------KVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGES 365
Query: 618 KQIQIP 623
P
Sbjct: 366 VDRNFP 371
Score = 118 bits (285), Expect = 1e-26
Identities = 79/282 (28%), Positives = 130/282 (46%), Gaps = 30/282 (10%)
Query: 350 RVIDVACGRHHTLILTENGL--YSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAG 407
+++ V CG HT+ +++G+ YS G FG+L L ++
Sbjct: 68 QIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTP---------LPIKALH 118
Query: 408 GAPLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVG 467
G + +A G H AV G + +WG +GQLGLG+ +D PQ + F G +++ V
Sbjct: 119 GIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVA 178
Query: 468 CGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVAL--HEPVRALAAGYFHNLA 525
GA H+ +T G+L+ G +G LG G R +P RV E + +A G+ H ++
Sbjct: 179 AGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTIS 238
Query: 526 LTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQI 585
+++ G +Y +G S H D + +L P ++ + I QI
Sbjct: 239 VSYSGALYTYGWSKYGQLG----------------HGDLEDHLIPHKLEALS-NSFISQI 281
Query: 586 SAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVK 627
S GW H+ + + G +Y WG N GQ+G G+ P +V+
Sbjct: 282 SGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVR 323
Score = 98.7 bits (235), Expect = 2e-20
Identities = 69/219 (31%), Positives = 108/219 (49%), Gaps = 20/219 (9%)
Query: 411 LVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGA 470
++ ++AG HS A+ +G + +WG G GQLG G+ +D+ +P ++ G ++ SV CGA
Sbjct: 17 VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGA 76
Query: 471 CHSVLLTRGG-ELWACGASVFGQLGTGQRGKASLPVRV-ALHE-PVRALAAGYFHNLALT 527
H+V ++ G E+++ G FG+LG G P+ + ALH ++ +A G H LA+T
Sbjct: 77 DHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVT 136
Query: 528 HKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISA 587
+GEV WG + + L D D L P + RI ++A
Sbjct: 137 MEGEVQSWGRN---------------QNGQLGLGDTEDS-LVPQKIQAFE-GIRIKMVAA 179
Query: 588 GWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEV 626
G H+ + G +Y WG G LG GDR +P V
Sbjct: 180 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERV 218
Score = 53.2 bits (122), Expect = 8e-07
Identities = 48/193 (24%), Positives = 79/193 (40%), Gaps = 20/193 (10%)
Query: 461 RKVQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHE--PVRALAA 518
RKV + GA HSV L G + + G GQLG G P +++ + + ++
Sbjct: 15 RKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTC 74
Query: 519 GYFHNLALTHKG-EVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTN 577
G H +A + G EVY WG H ++ P + +
Sbjct: 75 GADHTVAYSQSGMEVYSWGWGDFGRLG----------------HGNSSDLFTPLPIKALH 118
Query: 578 VRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVKIRTETQPHTM 637
RI QI+ G H + G + +WG N +GQLG GD + +P +++ + +
Sbjct: 119 -GIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMV 177
Query: 638 KSDSEKTTDADEN 650
+ +E T E+
Sbjct: 178 AAGAEHTAAVTED 190
Score = 46.4 bits (105), Expect = 9e-05
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 10/106 (9%)
Query: 351 VIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGA 409
+ ++ G HT+ LT +G LY G N FGQ+ ++VR
Sbjct: 278 ISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSP---------VQVRFPDDQ 328
Query: 410 PLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLV 455
+V V+ G H+ AV + WG G +GQLG+G D+ P+++
Sbjct: 329 KVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKII 374
>At5g19420.1 68418.m02314 zinc finger protein, putative / regulator
of chromosome condensation (RCC1) family protein similar
to zinc finger protein [Arabidopsis thaliana]
gi|15811367|gb|AAL08940
Length = 1124
Score = 105 bits (252), Expect = 1e-22
Identities = 82/280 (29%), Positives = 119/280 (42%), Gaps = 19/280 (6%)
Query: 351 VIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGA 409
V ++ACG H +++T+ G +S G+ + G+L + L
Sbjct: 333 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTT-NIEL---- 387
Query: 410 PLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFL-GRKVQSVGC 468
VA G YHS AV G L TWG G G LG GN W P+ V + G V S+ C
Sbjct: 388 ----VACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIAC 443
Query: 469 GACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHEPVRAL--AAGYFHNLAL 526
G H+ ++T G+L+ G FG LG G R +P V + +R + A G +H A+
Sbjct: 444 GPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAV 503
Query: 527 THKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQIS 586
EV V +S + L H D + L P+CV V Q++
Sbjct: 504 V---EVMVGSSSSSNCSSGKLFTWGDGDKSRLG-HGDKEPKLVPTCVAAL-VEPNFCQVA 558
Query: 587 AGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEV 626
G + + G +YT G GQLG+ ++PT V
Sbjct: 559 CGHSLTVALTTSGHVYTMGSPVYGQLGN-PHADGKVPTRV 597
Score = 95.5 bits (227), Expect = 2e-19
Identities = 71/225 (31%), Positives = 100/225 (44%), Gaps = 9/225 (4%)
Query: 320 TCGLAHWAVVSDGNARVMMASTPVNTELIG-RVIDVACGRHHTLILTENG-LYSAGDNTF 377
T G + ++ GN VN + G V +ACG +HT ++T G L++ GD TF
Sbjct: 406 TWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTF 465
Query: 378 GQLXXXXXXXXXXXXXXXXXXXVLRVRLAGG----APLVCVAAGHYHSAAVDAGGRLLTW 433
G L + VR A G A +V V G S+ +G +L TW
Sbjct: 466 GVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG-KLFTW 524
Query: 434 GWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELWACGASVFGQL 493
G G +LG G+ + + P V + V CG +V LT G ++ G+ V+GQL
Sbjct: 525 GDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQL 584
Query: 494 GTGQR-GKASLPVRVALHEP-VRALAAGYFHNLALTHKGEVYVWG 536
G GK V LH+ V +A G +H LT + EVY WG
Sbjct: 585 GNPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWG 629
Score = 83.0 bits (196), Expect = 9e-16
Identities = 83/306 (27%), Positives = 126/306 (41%), Gaps = 40/306 (13%)
Query: 354 VACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGAPLV 412
VACG +H+ +T +G LY+ G FG L L G +
Sbjct: 388 VACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNF--------LMEGIHVS 439
Query: 413 CVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACH 472
+A G YH+A V + G+L T+G G G LG G+ + P+ V G + CG H
Sbjct: 440 SIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWH 499
Query: 473 SVLLTR------------GGELWACGASVFGQLGTGQRGKASLPVRVA-LHEP-VRALAA 518
+ + G+L+ G +LG G + +P VA L EP +A
Sbjct: 500 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVAC 559
Query: 519 GYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNV 578
G+ +ALT G VY G SP + +P H D P+ VD
Sbjct: 560 GHSLTVALTTSGHVYTMG-SP---------VYGQLGNP----HADGK---VPTRVDGKLH 602
Query: 579 RGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVKIRTETQPHTMK 638
+ + +I+ G +H ++ + +YTWG +G+LG GD PT V+ + Q ++
Sbjct: 603 KSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIA 662
Query: 639 SDSEKT 644
S T
Sbjct: 663 CGSNFT 668
Score = 77.4 bits (182), Expect = 4e-14
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 28/214 (13%)
Query: 425 DAGGRLLTWGWGV-HGQLGLGNID---------DQWTPQLVTKFLGRKVQSVGCGACHSV 474
D G + WG G+ G LG GN D P+ + + VQ++ CG H+V
Sbjct: 285 DTLGDVFMWGEGIGEGVLGGGNHRVGSSLEIKMDSLLPKALESTIVLDVQNIACGGQHAV 344
Query: 475 LLTRGGELWACGASVFGQLGTGQRGKASLPVRV-ALHEP-VRALAAGYFHNLALTHKGEV 532
L+T+ GE ++ G G+LG G P + AL+ + +A G +H+ A+T G++
Sbjct: 345 LVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGEYHSCAVTLSGDL 404
Query: 533 YVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAGWHHS 592
Y WG + H + + P V+ + I+ G +H+
Sbjct: 405 YTWGKGDFGILG----------------HGNEVSHWVPKRVNFLMEGIHVSSIACGPYHT 448
Query: 593 CIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEV 626
++ + G ++T+G G LG GDRK + IP EV
Sbjct: 449 AVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREV 482
Score = 55.6 bits (128), Expect = 2e-07
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 6/206 (2%)
Query: 320 TCGLAHWAVVSDGNARVMMASTPVNTELIGRVIDVACGRHHTLILTEN--GLYSAGDNTF 377
T G + V+ G+ + + V++ R + ACG HT + E G S+ + +
Sbjct: 459 TFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS 518
Query: 378 GQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGA-PLVC-VAAGHYHSAAVDAGGRLLTWGW 435
G+L ++ +A P C VA GH + A+ G + T G
Sbjct: 519 GKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGS 578
Query: 436 GVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELWACGASVFGQLGT 495
V+GQLG + D + ++ K V+ + CGA H +LT E++ G G+LG
Sbjct: 579 PVYGQLGNPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGH 638
Query: 496 GQRGKASLP--VRVALHEPVRALAAG 519
G + P V + V+++A G
Sbjct: 639 GDADDRNSPTLVESLKDKQVKSIACG 664
Score = 43.2 bits (97), Expect = 9e-04
Identities = 33/119 (27%), Positives = 48/119 (40%), Gaps = 17/119 (14%)
Query: 513 VRALAAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSC 572
V+ +A G H + +T +GE + WG E S L H + P
Sbjct: 333 VQNIACGGQHAVLVTKQGESFSWG---------------EESEGRLG-HGVDSNVQHPKL 376
Query: 573 VDTTNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVKIRTE 631
+D N I ++ G +HSC + G +YTWG G LG G+ +P V E
Sbjct: 377 IDALNTTN-IELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLME 434
Score = 38.3 bits (85), Expect = 0.025
Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 8/118 (6%)
Query: 506 RVALHEPVRALAAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDND 565
RV+L + + + G H+ T G+V++WG + + +L D+
Sbjct: 265 RVSLSSAISSSSHGSGHDDGDT-LGDVFMWG---EGIGEGVLGGGNHRVGSSLEIKMDS- 319
Query: 566 RYLAPSCVDTTNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIP 623
L P +++T V + I+ G H+ ++ G ++WG +G+LG G +Q P
Sbjct: 320 --LLPKALESTIVLD-VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHP 374
>At5g12350.1 68418.m01453 zinc finger protein, putative / regulator
of chromosome condensation (RCC1) family protein similar
to zinc finger protein [Arabidopsis thaliana]
gi|15811367|gb|AAL08940
Length = 1062
Score = 101 bits (243), Expect = 2e-21
Identities = 75/225 (33%), Positives = 101/225 (44%), Gaps = 9/225 (4%)
Query: 320 TCGLAHWAVVSDGNARVMMASTPVNTELIG-RVIDVACGRHHTLILTENG-LYSAGDNTF 377
T G + V+ GN VN L G V +ACG +HT ++T G L++ GD TF
Sbjct: 370 TWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTF 429
Query: 378 GQLXXXXXXXXXXXXXXXXXXXVLRVRLAGG----APLVCVAAGHYHSAAVDAGGRLLTW 433
G L + VR A G A +V V G S+ +G +L TW
Sbjct: 430 GVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSG-KLFTW 488
Query: 434 GWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELWACGASVFGQL 493
G G G+LG GN + + P V + V CG +V LT G ++ G+ V+GQL
Sbjct: 489 GDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQL 548
Query: 494 GTGQR-GKASLPVRVALHEP-VRALAAGYFHNLALTHKGEVYVWG 536
G GK V LH+ V +A G +H LT + EVY WG
Sbjct: 549 GNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWG 593
Score = 100 bits (239), Expect = 5e-21
Identities = 77/268 (28%), Positives = 114/268 (42%), Gaps = 18/268 (6%)
Query: 351 VIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGA 409
V ++ACG H +++T+ G +S G+ + G+L + L
Sbjct: 297 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTT-NIEL---- 351
Query: 410 PLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFL-GRKVQSVGC 468
VA G +HS AV G L TWG G G LG GN W P+ V L G V S+ C
Sbjct: 352 ----VACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIAC 407
Query: 469 GACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHEPVRAL--AAGYFHNLAL 526
G H+ ++T G+L+ G FG LG G + +P V + +R + A G +H A+
Sbjct: 408 GPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAV 467
Query: 527 THKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQIS 586
EV V +S + L H + + L P+CV V Q++
Sbjct: 468 V---EVMVGSSSSSNCSSGKLFTWGDGDKGRLG-HGNKEPKLVPTCVAAL-VEPNFCQVA 522
Query: 587 AGWHHSCIINNMGSIYTWGLNFDGQLGS 614
G + + G +YT G GQLG+
Sbjct: 523 CGHSLTVALTTSGHVYTMGSPVYGQLGN 550
Score = 79.8 bits (188), Expect = 8e-15
Identities = 62/214 (28%), Positives = 98/214 (45%), Gaps = 28/214 (13%)
Query: 425 DAGGRLLTWGWGV-HGQLGLGN------ID---DQWTPQLVTKFLGRKVQSVGCGACHSV 474
DA G + WG G+ G LG GN D D P+ + + VQ++ CG H+V
Sbjct: 249 DALGDVFIWGEGIGEGVLGGGNRRVGSSFDIKMDSLLPKALESTIVLDVQNIACGGQHAV 308
Query: 475 LLTRGGELWACGASVFGQLGTGQRGKASLPVRV-ALHEP-VRALAAGYFHNLALTHKGEV 532
L+T+ GE ++ G G+LG G P + AL+ + +A G FH+ A+T G++
Sbjct: 309 LVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDL 368
Query: 533 YVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAGWHHS 592
Y WG V H + + P V+ + I+ G +H+
Sbjct: 369 YTWGKGDFGVLG----------------HGNEVSHWVPKRVNFLLEGIHVSSIACGPYHT 412
Query: 593 CIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEV 626
++ + G ++T+G G LG GD+K + IP EV
Sbjct: 413 AVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREV 446
Score = 79.4 bits (187), Expect = 1e-14
Identities = 80/295 (27%), Positives = 119/295 (40%), Gaps = 40/295 (13%)
Query: 354 VACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGAPLV 412
VACG H+ +T +G LY+ G FG L L G +
Sbjct: 352 VACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNF--------LLEGIHVS 403
Query: 413 CVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACH 472
+A G YH+A V + G+L T+G G G LG G+ + P+ V G + CG H
Sbjct: 404 SIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWH 463
Query: 473 SVLLTR------------GGELWACGASVFGQLGTGQRGKASLPVRVA-LHEP-VRALAA 518
+ + G+L+ G G+LG G + +P VA L EP +A
Sbjct: 464 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVAC 523
Query: 519 GYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNV 578
G+ +ALT G VY G SP H D P+ V+
Sbjct: 524 GHSLTVALTTSGHVYTMG-SPVYGQLGNS-------------HADGK---TPNRVEGKLH 566
Query: 579 RGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVKIRTETQ 633
+ + +I+ G +H ++ + +YTWG +G+LG GD PT V+ + Q
Sbjct: 567 KSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQ 621
Score = 56.0 bits (129), Expect = 1e-07
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 8/207 (3%)
Query: 320 TCGLAHWAVVSDGNARVMMASTPVNTELIGRVIDVACGRHHTLILTEN--GLYSAGDNTF 377
T G + V+ G+ + + V++ R + ACG HT + E G S+ + +
Sbjct: 423 TFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSS 482
Query: 378 GQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGA-PLVC-VAAGHYHSAAVDAGGRLLTWGW 435
G+L ++ +A P C VA GH + A+ G + T G
Sbjct: 483 GKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGS 542
Query: 436 GVHGQLGLGNIDDQWTPQLVTKFLGRK-VQSVGCGACHSVLLTRGGELWACGASVFGQLG 494
V+GQLG + D + TP V L + V+ + CGA H +LT E++ G G+LG
Sbjct: 543 PVYGQLGNSHADGK-TPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLG 601
Query: 495 TGQRGKASLP--VRVALHEPVRALAAG 519
G + P V + V+++A G
Sbjct: 602 HGDVDDRNSPTLVESLKDKQVKSIACG 628
Score = 42.7 bits (96), Expect = 0.001
Identities = 33/119 (27%), Positives = 47/119 (39%), Gaps = 17/119 (14%)
Query: 513 VRALAAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSC 572
V+ +A G H + +T +GE + WG E S L H + P
Sbjct: 297 VQNIACGGQHAVLVTKQGESFSWG---------------EESEGRLG-HGVDSNIQQPKL 340
Query: 573 VDTTNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVKIRTE 631
+D N I ++ G HSC + G +YTWG G LG G+ +P V E
Sbjct: 341 IDALNTTN-IELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLE 398
>At4g14370.1 68417.m02214 disease resistance protein (TIR-NBS-LRR
class), putative similar to zinc finger protein
(GI:15811367) [Arabidopsis thaliana]; similar to
TIR-NBS-LRR (GI:27466164) [Arabidopsis thaliana]; similar
to disease resistance protein RPP1-WsB (GI:3860165)
[Arabidopsis thaliana]
Length = 1996
Score = 99 bits (238), Expect = 7e-21
Identities = 68/208 (32%), Positives = 96/208 (46%), Gaps = 12/208 (5%)
Query: 414 VAAGHYHSAAVDAGGRLLTWGWGVH--GQLGLGNIDDQWTPQLVTKFL-GRKVQSVGCGA 470
VA G YH+ AV G L TWG G+H G LG G+ W P+ V+ + G +V SV CG
Sbjct: 1259 VACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGT 1318
Query: 471 CHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHEPVRAL--AAGYFHNLALTH 528
HS L T G+L+ G FG LG G R S P V + ++ L A G +H +A+
Sbjct: 1319 WHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKTLKVACGVWHTVAI-- 1376
Query: 529 KGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAG 588
V V + + L H + + YL P+CV + + QI+ G
Sbjct: 1377 ---VEVMNQTGTSTSSRKLFTWGDGDKNRLG-HGNKETYLLPTCVSSL-IDYNFNQIACG 1431
Query: 589 WHHSCIINNMGSIYTWGLNFDGQLGSGD 616
+ + G ++T G GQLGS +
Sbjct: 1432 HTFTVALTTSGHVFTMGGTSHGQLGSSN 1459
Score = 81.4 bits (192), Expect = 3e-15
Identities = 77/305 (25%), Positives = 123/305 (40%), Gaps = 38/305 (12%)
Query: 354 VACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGAPLV 412
VACG +HT ++ +G L++ GD V G ++
Sbjct: 1259 VACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPV------EGLQVL 1312
Query: 413 CVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACH 472
VA G +HSA A G+L T+G G G LG G+ + P+ V G K V CG H
Sbjct: 1313 SVACGTWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKTLKVACGVWH 1372
Query: 473 SVLL----------TRGGELWACGASVFGQLGTGQRGKASLPVRVA--LHEPVRALAAGY 520
+V + T +L+ G +LG G + LP V+ + +A G+
Sbjct: 1373 TVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGH 1432
Query: 521 FHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRG 580
+ALT G V+ G + S LP C+ + G
Sbjct: 1433 TFTVALTTSGHVFTMGGT------SHGQLGSSNSDGKLP------------CLVQDRLVG 1474
Query: 581 RIV-QISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVKIRTETQPHTMKS 639
V +IS G HH ++ + ++TWG +G+LG GD+ + PT V+ E ++
Sbjct: 1475 EFVEEISCGDHHVAVLTSRSEVFTWGKGSNGRLGHGDKDDRKTPTLVEALRERHVKSISC 1534
Query: 640 DSEKT 644
++++
Sbjct: 1535 GADQS 1539
Score = 81.0 bits (191), Expect = 4e-15
Identities = 54/191 (28%), Positives = 83/191 (43%), Gaps = 4/191 (2%)
Query: 350 RVIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGG 408
+V+ VACG H+ + T NG L++ GD FG L + +++A G
Sbjct: 1310 QVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKTLKVACG 1369
Query: 409 A-PLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVG 467
V + + + +L TWG G +LG GN + P V+ + +
Sbjct: 1370 VWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIA 1429
Query: 468 CGACHSVLLTRGGELWACGASVFGQLGTGQR-GKASLPVRVAL-HEPVRALAAGYFHNLA 525
CG +V LT G ++ G + GQLG+ GK V+ L E V ++ G H
Sbjct: 1430 CGHTFTVALTTSGHVFTMGGTSHGQLGSSNSDGKLPCLVQDRLVGEFVEEISCGDHHVAV 1489
Query: 526 LTHKGEVYVWG 536
LT + EV+ WG
Sbjct: 1490 LTSRSEVFTWG 1500
Score = 62.9 bits (146), Expect = 1e-09
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 10/160 (6%)
Query: 316 RRSLTCGLAHWAVVSDGNARVMMASTPVNTELIGRVIDVACGRHHTLILTENG-LYSAGD 374
R+ T G + GN + T V++ + +ACG T+ LT +G +++ G
Sbjct: 1390 RKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFTVALTTSGHVFTMGG 1449
Query: 375 NTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGAPLVCVAAGHYHSAAVDAGGRLLTWG 434
+ GQL +++ RL G + ++ G +H A + + + TWG
Sbjct: 1450 TSHGQLGSSNSDGKLPC--------LVQDRLVGEF-VEEISCGDHHVAVLTSRSEVFTWG 1500
Query: 435 WGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACHSV 474
G +G+LG G+ DD+ TP LV R V+S+ CGA SV
Sbjct: 1501 KGSNGRLGHGDKDDRKTPTLVEALRERHVKSISCGADQSV 1540
Score = 55.2 bits (127), Expect = 2e-07
Identities = 75/297 (25%), Positives = 118/297 (39%), Gaps = 59/297 (19%)
Query: 414 VAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACHS 473
+A G H A V G + TW G+LG G D P+LV + V CG H+
Sbjct: 1207 IACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDFVACGEYHT 1266
Query: 474 VLLTRGGEL--WACGASVFGQLGTGQRGKASLPVRVALHEPVRAL-----AAGYFHNLAL 526
++ G+L W G G LG G +P RV+ PV L A G +H+
Sbjct: 1267 CAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVS--GPVEGLQVLSVACGTWHSALA 1324
Query: 527 THKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQIS 586
T G+++ +G V H D + P V + + ++++
Sbjct: 1325 TANGKLFTFGDGAFGVLG----------------HGDRESVSYPKEVKMLSGL-KTLKVA 1367
Query: 587 AG-WHHSCII---NNMGS------IYTWGLNFDGQLGSGDRKQIQIPTEVKIRTETQPHT 636
G WH I+ N G+ ++TWG +LG G+++ +PT V
Sbjct: 1368 CGVWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCV---------- 1417
Query: 637 MKSDSEKTTDADENMEFNTKALVGCGGDFTVYIDDDGRIYSTGNT-HLQISNEKTKG 692
++ D N FN + CG FTV + G +++ G T H Q+ + + G
Sbjct: 1418 -------SSLIDYN--FNQ---IACGHTFTVALTTSGHVFTMGGTSHGQLGSSNSDG 1462
Score = 31.1 bits (67), Expect = 3.8
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 573 VDTTNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVK 627
V++T V+ + I+ G H ++ G ++TW G+LG G + + P V+
Sbjct: 1198 VNSTTVK---IDIACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVE 1249
>At1g69710.1 68414.m08022 zinc finger protein, putative / regulator
of chromosome condensation (RCC1) family protein similar
to zinc finger protein [Arabidopsis thaliana]
gi|15811367|gb|AAL08940
Length = 1028
Score = 96.7 bits (230), Expect = 7e-20
Identities = 61/194 (31%), Positives = 88/194 (45%), Gaps = 9/194 (4%)
Query: 351 VIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGA 409
V DVACG HT ++ +G L++ GD TFG L ++ ++A G
Sbjct: 396 VSDVACGPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTSVPREVESLIGLIVTKVACGV 455
Query: 410 ---PLVCVAAGHYHSAAVDAG-GRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQS 465
V A VD+ G++ TWG G GQLG G+ D + P+ V +
Sbjct: 456 WHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVISLTNENICQ 515
Query: 466 VGCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRV---ALHEPVRALAAGYFH 522
V CG +V T G ++ G++ +GQLG K + P RV + V +A G +H
Sbjct: 516 VACGHSLTVSRTSRGHVYTMGSTAYGQLG-NPTAKGNFPERVEGDIVEASVEEIACGSYH 574
Query: 523 NLALTHKGEVYVWG 536
LT K E+Y WG
Sbjct: 575 VAVLTSKSEIYTWG 588
Score = 95.5 bits (227), Expect = 2e-19
Identities = 78/272 (28%), Positives = 114/272 (41%), Gaps = 19/272 (6%)
Query: 353 DVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGAPL 411
++ACG+ H +++T+ G ++S G+ G+L + VR G L
Sbjct: 291 NIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDAQKPKF------ISSVRGLGFKSL 344
Query: 412 VCVAAGHYHSAAVDAGGRLLTWGWGVHGQ--LGLGNIDDQWTPQLVTKFL-GRKVQSVGC 468
C G +H+ A+ G L +WG G H LG GN W P+ VT L G V V C
Sbjct: 345 AC---GDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVAC 401
Query: 469 GACHSVLLTRGGELWACGASVFGQLGTGQRGKASLP--VRVALHEPVRALAAGYFHNLAL 526
G H+ ++ G+L+ G FG LG G R S+P V + V +A G +H A+
Sbjct: 402 GPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTSVPREVESLIGLIVTKVACGVWHTAAV 461
Query: 527 THKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQIS 586
EV + + H DND L P CV + I Q++
Sbjct: 462 V---EVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECV-ISLTNENICQVA 517
Query: 587 AGWHHSCIINNMGSIYTWGLNFDGQLGSGDRK 618
G + + G +YT G GQLG+ K
Sbjct: 518 CGHSLTVSRTSRGHVYTMGSTAYGQLGNPTAK 549
Score = 87.8 bits (208), Expect = 3e-17
Identities = 67/234 (28%), Positives = 110/234 (47%), Gaps = 26/234 (11%)
Query: 404 RLAGGAPLVCVAAGHYHSAAVDAGGRLLTWGWGVH-GQL-GLGN-----IDDQWTPQLVT 456
RL+ + + + G YH DA G + WG + G L G GN +D P+ +
Sbjct: 224 RLSLSSAVSTSSHGSYHED-FDALGDVFVWGESISDGVLSGTGNSLNSTTEDALLPKALE 282
Query: 457 KFLGRKVQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHEPV--R 514
+ Q++ CG CH+VL+T+ GE+++ G G+LG G A P ++ + +
Sbjct: 283 STIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDAQKPKFISSVRGLGFK 342
Query: 515 ALAAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVD 574
+LA G FH A+T G++Y WG V L H + P V
Sbjct: 343 SLACGDFHTCAITQSGDLYSWGDGTHNV--------------DLLGHGNESSCWIPKRV- 387
Query: 575 TTNVRGRIV-QISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVK 627
T +++G V ++ G H+ ++ + G ++T+G G LG GDR+ +P EV+
Sbjct: 388 TGDLQGLYVSDVACGPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTSVPREVE 441
Score = 81.4 bits (192), Expect = 3e-15
Identities = 81/310 (26%), Positives = 126/310 (40%), Gaps = 45/310 (14%)
Query: 354 VACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAG---GA 409
+ACG HT +T++G LYS GD T + R+ G G
Sbjct: 344 LACGDFHTCAITQSGDLYSWGDGTHN---------VDLLGHGNESSCWIPKRVTGDLQGL 394
Query: 410 PLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCG 469
+ VA G +H+A V + G+L T+G G G LG G+ P+ V +G V V CG
Sbjct: 395 YVSDVACGPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTSVPREVESLIGLIVTKVACG 454
Query: 470 ACHSVLLTR-------------GGELWACGASVFGQLGTGQRGKASLPVRVA--LHEPVR 514
H+ + G+++ G GQLG G LP V +E +
Sbjct: 455 VWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVISLTNENIC 514
Query: 515 ALAAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVD 574
+A G+ ++ T +G VY G++ + +PT + P V+
Sbjct: 515 QVACGHSLTVSRTSRGHVYTMGST----------AYGQLGNPTAKGN-------FPERVE 557
Query: 575 TTNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVKIRTETQP 634
V + +I+ G +H ++ + IYTWG +GQLG G+ + + P V E Q
Sbjct: 558 GDIVEASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHGNVENKREPAVVGFLREKQV 617
Query: 635 HTMKSDSEKT 644
+ S T
Sbjct: 618 KAITCGSNFT 627
Score = 57.6 bits (133), Expect = 4e-08
Identities = 50/201 (24%), Positives = 85/201 (42%), Gaps = 17/201 (8%)
Query: 272 KMTQLISTFVN-VACAVEAREPCQDIHLEVTQPPSDTWKNQVFTPRRSLTCGLAHWAVVS 330
++ LI V VAC V ++ E ++ D+ + QVFT L H
Sbjct: 439 EVESLIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGH----G 494
Query: 331 DGNARVMMASTPVNTELIGRVIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXX 389
D + +++ T + VACG T+ T G +Y+ G +GQL
Sbjct: 495 DNDTKLLPECVISLTN--ENICQVACGHSLTVSRTSRGHVYTMGSTAYGQLGNPTAKGNF 552
Query: 390 XXXXXXXXXXVLRVRLAGGAPLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQ 449
A + +A G YH A + + + TWG G++GQLG GN++++
Sbjct: 553 PERVEGDIVE---------ASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHGNVENK 603
Query: 450 WTPQLVTKFLGRKVQSVGCGA 470
P +V ++V+++ CG+
Sbjct: 604 REPAVVGFLREKQVKAITCGS 624
Score = 50.4 bits (115), Expect = 6e-06
Identities = 61/243 (25%), Positives = 95/243 (39%), Gaps = 13/243 (5%)
Query: 298 LEVTQPPSDTWKNQVFTPRRSL-TCGLAHWAVVSDGNARVMMASTPVNTE-LIGRVID-V 354
L V+ W V L T G + + G+ R S P E LIG ++ V
Sbjct: 394 LYVSDVACGPWHTAVVASSGQLFTFGDGTFGALGHGDRR--STSVPREVESLIGLIVTKV 451
Query: 355 ACGRHHTLILTE--NGLYSAG-DNTFGQLXXXXXXXXXXXXXXXXXXXVL-RVRLAGGAP 410
ACG HT + E N A D++ GQ+ +L ++
Sbjct: 452 ACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVISLTNE 511
Query: 411 LVC-VAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCG 469
+C VA GH + + + G + T G +GQLG + ++ + V+ + CG
Sbjct: 512 NICQVACGHSLTVSRTSRGHVYTMGSTAYGQLGNPTAKGNFPERVEGDIVEASVEEIACG 571
Query: 470 ACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVAL--HEPVRALAAG-YFHNLAL 526
+ H +LT E++ G + GQLG G P V + V+A+ G F +
Sbjct: 572 SYHVAVLTSKSEIYTWGKGLNGQLGHGNVENKREPAVVGFLREKQVKAITCGSNFTAVIC 631
Query: 527 THK 529
HK
Sbjct: 632 VHK 634
Score = 37.1 bits (82), Expect = 0.058
Identities = 30/120 (25%), Positives = 49/120 (40%), Gaps = 11/120 (9%)
Query: 504 PVRVALHEPVRALAAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDD 563
P R++L V + G +H G+V+VWG S + + T
Sbjct: 222 PFRLSLSSAVSTSSHGSYHE-DFDALGDVFVWGES---ISDGVLSGTGNSLNST------ 271
Query: 564 NDRYLAPSCVDTTNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIP 623
+ L P +++T V I+ G H+ ++ G I++WG G+LG G Q P
Sbjct: 272 TEDALLPKALESTIVLDA-QNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDAQKP 330
>At1g76950.1 68414.m08958 zinc finger protein (PRAF1) / regulator of
chromosome condensation (RCC1) family protein identical
to zinc finger protein PRAF1 [Arabidopsis thaliana]
gi|15811367|gb|AAL08940.
Length = 1103
Score = 96.3 bits (229), Expect = 9e-20
Identities = 77/284 (27%), Positives = 120/284 (42%), Gaps = 19/284 (6%)
Query: 337 MMASTPVNTELIGRVIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXX 395
++ P+ + ++ V +ACG H +T G +++ G+ + G+L
Sbjct: 269 VLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPR--- 325
Query: 396 XXXXVLRVRLAGGAPLVCVAAGHYHSAAVDAGGRLLTWGWGVH--GQLGLGNIDDQWTPQ 453
L L + + VA G +H+ AV G L TWG G H G LG G+ W P+
Sbjct: 326 -----LVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPK 380
Query: 454 LVTKFL-GRKVQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHEP 512
+ L G V SV CG H+ L+T G L+ G FG LG G + P V
Sbjct: 381 RIAGSLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSG 440
Query: 513 VR--ALAAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAP 570
+R A++ G +H A+ E+ V ++ V + L H D D L P
Sbjct: 441 LRTIAVSCGVWHTAAVV---EIIVTQSNSSSVSSGKLFTWGDGDKNRLG-HGDKDPRLKP 496
Query: 571 SCVDTTNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGS 614
+CV + +I+ G + + G ++T G GQLG+
Sbjct: 497 TCVPAL-IDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGN 539
Score = 89.8 bits (213), Expect = 8e-18
Identities = 61/193 (31%), Positives = 93/193 (48%), Gaps = 8/193 (4%)
Query: 351 VIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGG- 408
V V+CG HT ++T G L++ GD TFG L + + ++ G
Sbjct: 391 VASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGV 450
Query: 409 ---APLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQS 465
A +V + +S++V +G +L TWG G +LG G+ D + P V +
Sbjct: 451 WHTAAVVEIIVTQSNSSSVSSG-KLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHK 509
Query: 466 VGCGACHSVLLTRGGELWACGASVFGQLGTGQR-GKASLPVRVAL-HEPVRALAAGYFHN 523
+ CG +V LT G+++ G++V+GQLG Q GK V L E V ++ G +H
Sbjct: 510 IACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHV 569
Query: 524 LALTHKGEVYVWG 536
ALT + EVY WG
Sbjct: 570 AALTSRNEVYTWG 582
Score = 74.5 bits (175), Expect = 3e-13
Identities = 77/292 (26%), Positives = 124/292 (42%), Gaps = 44/292 (15%)
Query: 354 VACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAG---GA 409
VACG HT +T G LY+ GD T + R+AG G
Sbjct: 339 VACGEFHTCAVTLAGELYTWGDGTHN---------VGLLGHGSDISHWIPKRIAGSLEGL 389
Query: 410 PLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCG 469
+ V+ G +H+A + + GRL T+G G G LG G+ + P+ V G + +V CG
Sbjct: 390 HVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCG 449
Query: 470 ACHS-----VLLTRG-------GELWACGASVFGQLGTGQRGKASLP--VRVALHEPVRA 515
H+ +++T+ G+L+ G +LG G + P V +
Sbjct: 450 VWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHK 509
Query: 516 LAAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDT 575
+A G+ + LT G+V+ G++ V + P L D+ LA V+
Sbjct: 510 IACGHSLTVGLTTSGQVFTMGST---VYGQLGNLQTDGKLPCLV----EDK-LASEFVE- 560
Query: 576 TNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVK 627
+IS G +H + + +YTWG +G+LG GD + ++PT V+
Sbjct: 561 --------EISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVE 604
Score = 52.8 bits (121), Expect = 1e-06
Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 6/131 (4%)
Query: 414 VAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACHS 473
+A GH + + G++ T G V+GQLG D + + K V+ + CGA H
Sbjct: 510 IACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHV 569
Query: 474 VLLTRGGELWACGASVFGQLGTGQRGKASLPVRV-ALHE-PVRALAAGYFHNLAL-THKG 530
LT E++ G G+LG G +P V AL + V+ +A G + A+ HK
Sbjct: 570 AALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAICLHK- 628
Query: 531 EVYVWGASPQQ 541
+V GA Q
Sbjct: 629 --WVSGAEQSQ 637
Score = 41.9 bits (94), Expect = 0.002
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 7/103 (6%)
Query: 530 GEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAGW 589
G+VY+WG + + + ++ L D L P +++ N+ + QI+ G
Sbjct: 238 GDVYIWG---EVICDNVVKVGIDKNASYLTTRTD---VLVPKPLES-NIVLDVHQIACGV 290
Query: 590 HHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVKIRTET 632
H+ + G I+TWG G+LG G K + P V+ T T
Sbjct: 291 RHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTAT 333
Score = 35.5 bits (78), Expect = 0.18
Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 18/116 (15%)
Query: 513 VRALAAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSC 572
V +A G H +T +GE++ WG E S L H P
Sbjct: 283 VHQIACGVRHAAFVTRQGEIFTWG---------------EESGGRLG-HGIGKDVFHPRL 326
Query: 573 VDTTNVRGRIVQISAGWHHSCIINNMGSIYTW--GLNFDGQLGSGDRKQIQIPTEV 626
V++ + ++ G H+C + G +YTW G + G LG G IP +
Sbjct: 327 VESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRI 382
>At5g08710.1 68418.m01035 regulator of chromosome condensation
(RCC1) family protein / UVB-resistance protein-related
contains Pfam PF00415 : Regulator of chromosome
condensation (RCC1); similar to UVB-resistance protein
UVR8 (GI:10177674) {Arabidopsis thaliana}
Length = 434
Score = 95.9 bits (228), Expect = 1e-19
Identities = 59/192 (30%), Positives = 98/192 (51%), Gaps = 21/192 (10%)
Query: 433 WGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELWACGASVFGQ 492
WG G +G+LGLGN+D QWTP + + + +V CG H++ LT ++A G + GQ
Sbjct: 54 WGSGDYGRLGLGNLDSQWTPAVCSALSDHSITAVACGGAHTLFLTETRRVFATGLNDCGQ 113
Query: 493 LGTGQ-RGKASLPVRVA-LHEPVRALAAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXX 550
LG + A P+ V+ L + + ++AGY+H+ A+T GE+Y+WG +
Sbjct: 114 LGVSDVKSHAMDPLEVSGLDKDILHISAGYYHSAAITVDGELYMWGKN------------ 161
Query: 551 XEPSSPTLPFHDDNDRYL-APSCVDTTNVRGRIVQ-ISAGWHHSCIINNMGSIYTWGLNF 608
SS L R + P+ V+ + G +Q ++ G HS + + G + +WG
Sbjct: 162 ---SSGQLGLGKKAARVVRVPTKVEA--LHGITIQSVALGSEHSVAVTDGGEVLSWGGGG 216
Query: 609 DGQLGSGDRKQI 620
G+LG G + +
Sbjct: 217 SGRLGHGHQSSL 228
Score = 90.6 bits (215), Expect = 4e-18
Identities = 68/265 (25%), Positives = 114/265 (43%), Gaps = 34/265 (12%)
Query: 351 VIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGA 409
++ ++ G +H+ +T +G LY G N+ GQL +V G
Sbjct: 136 ILHISAGYYHSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPT-------KVEALHGI 188
Query: 410 PLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGN---------IDDQWTPQLVTKFLG 460
+ VA G HS AV GG +L+WG G G+LG G+ + ++TP+L+ + G
Sbjct: 189 TIQSVALGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEG 248
Query: 461 RKVQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHEPVRALAAGY 520
KV +V G HS G + G ++G G A+ P ++ +A G
Sbjct: 249 IKVTNVAAGLLHSACTDENGSAFMFGEKSINKMGFGGVRNATTPSIISEVPYAEEVACGG 308
Query: 521 FHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRG 580
+H +T GE+Y WG++ + T H +P V+ +
Sbjct: 309 YHTCVVTRGGELYTWGSNENGCLG---------TDSTYVSH-------SPVRVEGPFLES 352
Query: 581 RIVQISAGWHHSCIINNMGSIYTWG 605
+ Q+S GW H+ I++ +++TWG
Sbjct: 353 TVSQVSCGWKHTAAISD-NNVFTWG 376
Score = 85.4 bits (202), Expect = 2e-16
Identities = 80/289 (27%), Positives = 122/289 (42%), Gaps = 44/289 (15%)
Query: 354 VACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAG-GAPL 411
VACG HTL LTE +++ G N GQL + ++G +
Sbjct: 87 VACGGAHTLFLTETRRVFATGLNDCGQLGVSDVKSHAMDP----------LEVSGLDKDI 136
Query: 412 VCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWT--PQLVTKFLGRKVQSVGCG 469
+ ++AG+YHSAA+ G L WG GQLGLG + P V G +QSV G
Sbjct: 137 LHISAGYYHSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALG 196
Query: 470 ACHSVLLTRGGELWACGASVFGQLGTGQ--------RGKASLPVRVALH-EPVRA--LAA 518
+ HSV +T GGE+ + G G+LG G R + R+ E ++ +AA
Sbjct: 197 SEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAA 256
Query: 519 GYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNV 578
G H+ G +++G E S + F + PS +
Sbjct: 257 GLLHSACTDENGSAFMFG---------------EKSINKMGFGGVRNA-TTPSIISEVPY 300
Query: 579 RGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVK 627
+++ G +H+C++ G +YTWG N +G LG+ P V+
Sbjct: 301 AE---EVACGGYHTCVVTRGGELYTWGSNENGCLGTDSTYVSHSPVRVE 346
Score = 85.4 bits (202), Expect = 2e-16
Identities = 76/268 (28%), Positives = 114/268 (42%), Gaps = 16/268 (5%)
Query: 334 ARVMMASTPVNTELIGRVID-VACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXX 391
ARV+ T V L G I VA G H++ +T+ G + S G G+L
Sbjct: 173 ARVVRVPTKVEA-LHGITIQSVALGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGI 231
Query: 392 XXXXXXXXVLRVRLAGGAPLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWT 451
++ G + VAAG HSA D G +G ++G G + + T
Sbjct: 232 LRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGEKSINKMGFGGVRNATT 291
Query: 452 PQLVTKFLGRKVQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVA--- 508
P ++++ + V CG H+ ++TRGGEL+ G++ G LGT + PVRV
Sbjct: 292 PSIISEV--PYAEEVACGGYHTCVVTRGGELYTWGSNENGCLGTDSTYVSHSPVRVEGPF 349
Query: 509 LHEPVRALAAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYL 568
L V ++ G+ H A++ V+ WG S L D D Y
Sbjct: 350 LESTVSQVSCGWKHTAAIS-DNNVFTWGWGGSH---GTFSVDGHSSGGQLGHGSDVD-YA 404
Query: 569 APSCVDT-TNVRGRIVQISAGWHHSCII 595
P+ VD NVR V IS G++H+ +
Sbjct: 405 RPAMVDLGKNVRA--VHISCGFNHTAAV 430
Score = 64.5 bits (150), Expect = 3e-10
Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 12/218 (5%)
Query: 411 LVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGA 470
+ VA G H+ + R+ G GQLG+ ++ L L + + + G
Sbjct: 84 ITAVACGGAHTLFLTETRRVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDKDILHISAGY 143
Query: 471 CHSVLLTRGGELWACGASVFGQLGTGQRGK--ASLPVRV-ALHE-PVRALAAGYFHNLAL 526
HS +T GEL+ G + GQLG G++ +P +V ALH ++++A G H++A+
Sbjct: 144 YHSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAV 203
Query: 527 THKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQIS 586
T GEV WG S N + + + ++ ++
Sbjct: 204 TDGGEVLSWGGG------GSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGI--KVTNVA 255
Query: 587 AGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPT 624
AG HS + GS + +G ++G G + P+
Sbjct: 256 AGLLHSACTDENGSAFMFGEKSINKMGFGGVRNATTPS 293
Score = 48.8 bits (111), Expect = 2e-05
Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 23/154 (14%)
Query: 478 RGGELWACGASVFGQLGTGQRGKASLP-VRVALHE-PVRALAAGYFHNLALTHKGEVYVW 535
R +W G+ +G+LG G P V AL + + A+A G H L LT V+
Sbjct: 49 RFAAMW--GSGDYGRLGLGNLDSQWTPAVCSALSDHSITAVACGGAHTLFLTETRRVFAT 106
Query: 536 GASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAGWHHSCII 595
G + L D + P ++ + + I+ ISAG++HS I
Sbjct: 107 GLN---------------DCGQLGVSDVKSHAMDP--LEVSGLDKDILHISAGYYHSAAI 149
Query: 596 NNMGSIYTWGLNFDGQLGSGDR--KQIQIPTEVK 627
G +Y WG N GQLG G + + +++PT+V+
Sbjct: 150 TVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVE 183
Score = 41.5 bits (93), Expect = 0.003
Identities = 48/160 (30%), Positives = 69/160 (43%), Gaps = 32/160 (20%)
Query: 332 GNARVMMASTPVNTELIGRVIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXX 390
G V A+TP + +VACG +HT ++T G LY+ G N G L
Sbjct: 282 GFGGVRNATTPSIISEVPYAEEVACGGYHTCVVTRGGELYTWGSNENGCLGTDSTYVSHS 341
Query: 391 XXXXXXXXXVLRVRLAG---GAPLVCVAAGHYHSAAVDAGGRLLTWGW-GVH-------- 438
VR+ G + + V+ G H+AA+ + + TWGW G H
Sbjct: 342 -----------PVRVEGPFLESTVSQVSCGWKHTAAI-SDNNVFTWGWGGSHGTFSVDGH 389
Query: 439 ---GQLGLGNIDDQWTPQLVTKFLGRKVQSV--GCGACHS 473
GQLG G+ D P +V LG+ V++V CG H+
Sbjct: 390 SSGGQLGHGSDVDYARPAMVD--LGKNVRAVHISCGFNHT 427
>At3g55580.1 68416.m06171 regulator of chromosome condensation
(RCC1) family protein UVB-resistance protein UVR8,
Arabidopsis thaliana, EMBL:AF130441; contains Pfam
PF00415: Regulator of chromosome condensation (RCC1)
domain
Length = 488
Score = 94.7 bits (225), Expect = 3e-19
Identities = 45/127 (35%), Positives = 72/127 (56%), Gaps = 4/127 (3%)
Query: 414 VAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACHS 473
+A G HSA + G LLT+GWG++GQ G G+ DD+ +P V+ LG +++ V G H+
Sbjct: 316 IACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHT 375
Query: 474 VLLTRGGELWACGASVFGQLGTGQRGKASLPVRVAL----HEPVRALAAGYFHNLALTHK 529
+ G+++A G + FGQLGTG +LP + + V+ ++ G H +T +
Sbjct: 376 TCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGARHTAVITDE 435
Query: 530 GEVYVWG 536
G V+ WG
Sbjct: 436 GRVFCWG 442
Score = 77.8 bits (183), Expect = 3e-14
Identities = 75/254 (29%), Positives = 108/254 (42%), Gaps = 42/254 (16%)
Query: 403 VRLAGGAPLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGN-----IDDQWTPQLVTK 457
V LA G +V VAAG H+ A+ G++ WG+G GQLGLG+ P +
Sbjct: 228 VSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIPCIEPS 287
Query: 458 FLGRKVQS-------VGCG----------AC---HSVLLTRGGELWACGASVFGQLGTGQ 497
G+ S V CG AC HS ++T G L G ++GQ G G
Sbjct: 288 SYGKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGS 347
Query: 498 RGKASLPVRVA--LHEPVRALAAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSS 555
P V+ L + +AAG +H + G+VY +G + +
Sbjct: 348 TDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGN-----QFGQLGTGCDQA 402
Query: 556 PTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSG 615
TLP + L ++ NV+ IS G H+ +I + G ++ WG N GQLG G
Sbjct: 403 ETLP------KLLEAPNLENVNVK----TISCGARHTAVITDEGRVFCWGWNKYGQLGIG 452
Query: 616 DRKQIQIPTEVKIR 629
D P EV+I+
Sbjct: 453 DVIDRNAPAEVRIK 466
Score = 64.5 bits (150), Expect = 3e-10
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 14/196 (7%)
Query: 336 VMMASTPVNTELIGRVID-VACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXX 393
V M+S ++G + +ACG H+ ++T+ G L + G +GQ
Sbjct: 297 VNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTC 356
Query: 394 XXXXXXVLRVRLAGGAPLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQ 453
+L +R+ VAAG +H+ + G + +G GQLG G + P+
Sbjct: 357 VSS---LLGIRIEE------VAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPK 407
Query: 454 LVT--KFLGRKVQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHE 511
L+ V+++ CGA H+ ++T G ++ G + +GQLG G + P V + +
Sbjct: 408 LLEAPNLENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVIDRNAPAEVRIKD 467
Query: 512 PV-RALAAGYFHNLAL 526
+ +A G++H L L
Sbjct: 468 CFPKNIACGWWHTLLL 483
Score = 60.5 bits (140), Expect = 5e-09
Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 9/159 (5%)
Query: 319 LTCGLAHWAVVSDGNARVMMASTPVNTELIGRVIDVACGRHHTLILTENG-LYSAGDNTF 377
LT G + G+ ++ T V++ L R+ +VA G HT + +G +Y+ G N F
Sbjct: 333 LTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQF 392
Query: 378 GQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGAPLVCVAAGHYHSAAVDAGGRLLTWGWGV 437
GQL +L + ++ G H+A + GR+ WGW
Sbjct: 393 GQL-------GTGCDQAETLPKLLEAPNLENVNVKTISCGARHTAVITDEGRVFCWGWNK 445
Query: 438 HGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACHSVLL 476
+GQLG+G++ D+ P V + +++ CG H++LL
Sbjct: 446 YGQLGIGDVIDRNAPAEV-RIKDCFPKNIACGWWHTLLL 483
Score = 46.4 bits (105), Expect = 9e-05
Identities = 65/242 (26%), Positives = 99/242 (40%), Gaps = 28/242 (11%)
Query: 410 PLVCVA---AGHYHSAAVDAGGRLLTWGWGVHGQLG--LGNIDDQWTPQLVTKFLGRKVQ 464
P VCV AG H AV ++ TWGW G G +D + ++ F +V
Sbjct: 115 PEVCVQKAEAGWAHCVAVTENQQVYTWGWRECIPTGRVFGQVDGDSCERNIS-FSTEQVS 173
Query: 465 SVG-----CGACHSVLLTRGG----ELWACGASVFGQLGTGQRGK---ASLPVRVALHEP 512
S G S + RGG + S + Q ++LP V+L
Sbjct: 174 SSSQGKKSSGGTSSQVEGRGGGEPTKKRRISPSKQAAENSSQSDNIDLSALPCLVSLAPG 233
Query: 513 VR--ALAAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAP 570
VR ++AAG H LAL+ G+V+ WG + S +P + + A
Sbjct: 234 VRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYGKAT 293
Query: 571 SC-VDTTNVR--GRIV-----QISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQI 622
S V+ ++V GR++ +I+ G HS +I + G++ T+G GQ G G
Sbjct: 294 SSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELS 353
Query: 623 PT 624
PT
Sbjct: 354 PT 355
Score = 42.3 bits (95), Expect = 0.002
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Query: 563 DNDRYLAPSCVDTTNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQI 622
DN A C+ + RIV ++AG H+ ++++G ++ WG +GQLG G R
Sbjct: 217 DNIDLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSR----- 271
Query: 623 PTEVKIRTETQPHTMKSDSEKTTDADENMEFNTKALVGCGGDFTVYI 669
+R + PH + + + N ++V CG Y+
Sbjct: 272 -----VRLVSSPHPIPCIEPSSYGKATSSGVNMSSVVQCGRVLGSYV 313
Score = 31.9 bits (69), Expect = 2.2
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 461 RKVQSVGCGACHSVLLTRGGELWACGASV-FGQ--LGTGQRGKASLPVRVALHEPVRALA 517
+ V GCG ++ G+L G++ GQ + +G+ G+ P + V+
Sbjct: 66 KDVSGGGCG--FAMATAESGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPPEVCVQKAE 123
Query: 518 AGYFHNLALTHKGEVYVWG 536
AG+ H +A+T +VY WG
Sbjct: 124 AGWAHCVAVTENQQVYTWG 142
>At3g23270.1 68416.m02933 regulator of chromosome condensation
(RCC1) family protein contains Pfam domain PF00415:
Regulator of chromosome condensation (RCC1); similar to
zinc finger protein (GI:15811367) [Arabidopsis
thaliana]; similar to chromosome condensation regulator
protein (GI:22770461) [Cicer arietinum]
Length = 1045
Score = 94.7 bits (225), Expect = 3e-19
Identities = 75/284 (26%), Positives = 119/284 (41%), Gaps = 22/284 (7%)
Query: 337 MMASTPVNTELIGRVIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXX 395
++ P+ + ++ V + CG H ++T G +++ G+ G+L
Sbjct: 239 VLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKL-- 296
Query: 396 XXXXVLRVRLAGGAPLVCVAAGHYHSAAVDAGGRLLTWGWGVH--GQLGLGNIDDQWTPQ 453
V + VA G YH+ V G L +WG G+H G LG G+ W P+
Sbjct: 297 -------VEFLALTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPK 349
Query: 454 LVTKFL-GRKVQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHEP 512
V+ L G +V SV CG HS L T G+L+ G FG LG G R S P V
Sbjct: 350 RVSGPLEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNG 409
Query: 513 VRAL--AAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAP 570
++ + A +H A+ V V G + + + L H + + YL P
Sbjct: 410 LKTVKVACSIWHTAAI-----VEVMGQTATSMSSRKLFTWGDGDKNRLG-HGNKETYLLP 463
Query: 571 SCVDTTNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGS 614
+CV + + +I+ G + + G ++T G GQLG+
Sbjct: 464 TCVSSL-IDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLGN 506
Score = 79.8 bits (188), Expect = 8e-15
Identities = 56/191 (29%), Positives = 78/191 (40%), Gaps = 4/191 (2%)
Query: 350 RVIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGG 408
+V+ VACG H+ + T NG L++ GD FG L + V++A
Sbjct: 359 QVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACS 418
Query: 409 APLVCVAAGHYHSAAVDAGGR-LLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVG 467
A R L TWG G +LG GN + P V+ + +
Sbjct: 419 IWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIA 478
Query: 468 CGACHSVLLTRGGELWACGASVFGQLGTG-QRGKASLPVRVAL-HEPVRALAAGYFHNLA 525
CG +V LT G ++ G + GQLG GK V+ L E V +A G H
Sbjct: 479 CGHTFTVALTTSGHVFTMGGTAHGQLGNSISDGKLPCLVQDRLVGEFVEEIACGAHHVAV 538
Query: 526 LTHKGEVYVWG 536
LT + EV+ WG
Sbjct: 539 LTSRSEVFTWG 549
Score = 78.2 bits (184), Expect = 3e-14
Identities = 77/309 (24%), Positives = 124/309 (40%), Gaps = 44/309 (14%)
Query: 354 VACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAG---GA 409
VACG +HT +++ +G L+S GD + R++G G
Sbjct: 308 VACGEYHTCVVSTSGDLFSWGDGIHN---------VGLLGHGSDISHWIPKRVSGPLEGL 358
Query: 410 PLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCG 469
++ VA G +HSA A G+L T+G G G LG GN + P+ V G K V C
Sbjct: 359 QVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACS 418
Query: 470 ACHSVLLTR----------GGELWACGASVFGQLGTGQRGKASLPVRVA--LHEPVRALA 517
H+ + +L+ G +LG G + LP V+ + +A
Sbjct: 419 IWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIA 478
Query: 518 AGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTN 577
G+ +ALT G V+ G + S LP C+
Sbjct: 479 CGHTFTVALTTSGHVFTMGGTAHGQLGNSI------SDGKLP------------CLVQDR 520
Query: 578 VRGRIVQ-ISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVKIRTETQPHT 636
+ G V+ I+ G HH ++ + ++TWG +G+LG GD + + PT V+ + +
Sbjct: 521 LVGEFVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDRHVKS 580
Query: 637 MKSDSEKTT 645
+ S T+
Sbjct: 581 LSCGSNFTS 589
Score = 60.5 bits (140), Expect = 5e-09
Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 16/182 (8%)
Query: 448 DQWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLP--V 505
D TP+ + + V + CG H L+TR GE++ G V G+LG G + S P V
Sbjct: 238 DVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLV 297
Query: 506 RVALHEPVRALAAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDND 565
+ +A G +H ++ G+++ WG V L H +
Sbjct: 298 EFLALTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVG--------------LLGHGSDI 343
Query: 566 RYLAPSCVDTTNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTE 625
+ P V +++ ++ G HS + G ++T+G G LG G+R+ + P E
Sbjct: 344 SHWIPKRVSGPLEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKE 403
Query: 626 VK 627
V+
Sbjct: 404 VQ 405
Score = 60.1 bits (139), Expect = 7e-09
Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 7/228 (3%)
Query: 298 LEVTQPPSDTWKNQVFTPRRSL-TCGLAHWAVVSDGNARVMMASTPVNTELIGRVIDVAC 356
L+V TW + + T L T G + V+ GN + V + + + VAC
Sbjct: 358 LQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVAC 417
Query: 357 GRHHTLILTENGLYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAG--GAPLVCV 414
HT + E +A + +L +L ++ +
Sbjct: 418 SIWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKI 477
Query: 415 AAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLV-TKFLGRKVQSVGCGACHS 473
A GH + A+ G + T G HGQLG +I D P LV + +G V+ + CGA H
Sbjct: 478 ACGHTFTVALTTSGHVFTMGGTAHGQLG-NSISDGKLPCLVQDRLVGEFVEEIACGAHHV 536
Query: 474 VLLTRGGELWACGASVFGQLGTGQRGKASLPVRV-ALHE-PVRALAAG 519
+LT E++ G G+LG G P V AL + V++L+ G
Sbjct: 537 AVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDRHVKSLSCG 584
Score = 58.8 bits (136), Expect = 2e-08
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 10/156 (6%)
Query: 316 RRSLTCGLAHWAVVSDGNARVMMASTPVNTELIGRVIDVACGRHHTLILTENG-LYSAGD 374
R+ T G + GN + T V++ + +ACG T+ LT +G +++ G
Sbjct: 439 RKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGG 498
Query: 375 NTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGAPLVCVAAGHYHSAAVDAGGRLLTWG 434
GQL +++ RL G + +A G +H A + + + TWG
Sbjct: 499 TAHGQL--------GNSISDGKLPCLVQDRLVGEF-VEEIACGAHHVAVLTSRSEVFTWG 549
Query: 435 WGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGA 470
G +G+LG G+ +D+ TP LV R V+S+ CG+
Sbjct: 550 KGANGRLGHGDTEDKRTPTLVEALRDRHVKSLSCGS 585
Score = 37.1 bits (82), Expect = 0.058
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 10/98 (10%)
Query: 530 GEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAGW 589
G+VYVWG +V S+ T+ L P +++ NV + QI G
Sbjct: 211 GDVYVWG----EVWTEGILPDGTASNETV-----KTDVLTPRPLES-NVVLDVHQIVCGV 260
Query: 590 HHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVK 627
H ++ G ++TWG G+LG G + I P V+
Sbjct: 261 RHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVE 298
>At5g60870.2 68418.m07635 regulator of chromosome condensation
(RCC1) family protein weak similarity to UVB-resistance
protein UVR8 [Arabidopsis thaliana] GI:5478530; contains
Pfam profile PF00415: Regulator of chromosome
condensation (RCC1)
Length = 383
Score = 92.3 bits (219), Expect = 1e-18
Identities = 68/224 (30%), Positives = 105/224 (46%), Gaps = 27/224 (12%)
Query: 413 CVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACH 472
C+A G HS A+ G + TWG+G G LG + P+ V K+ ++ H
Sbjct: 87 CIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTH 146
Query: 473 SVLLTRGGELWACGASV-FGQLGTG------QRGKASLPVRV-ALHEPVRALAAGYFHNL 524
+ +T GEL+ G G+LG G + G S+P +V AL PV +++ G F +
Sbjct: 147 TAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTM 206
Query: 525 ALTHKGEVYVWGA-SPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIV 583
ALT +G+++ WGA S ++ EP +P PS RI
Sbjct: 207 ALTKEGQLWNWGANSNYELGRGDNLGGWEP----MP---------VPSLEGV-----RIT 248
Query: 584 QISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVK 627
QI+ G +HS + G + +WG GQLGS + ++PTE++
Sbjct: 249 QIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIE 292
Score = 75.4 bits (177), Expect = 2e-13
Identities = 55/205 (26%), Positives = 87/205 (42%), Gaps = 14/205 (6%)
Query: 414 VAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACHS 473
++ G +HS + G L WG G G+LG G + + P L F ++ + G HS
Sbjct: 37 ISCGLFHSG-LTIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHS 95
Query: 474 VLLTRGGELWACGASVFGQLGTGQRGKASLPVRV--ALHEPVRALAAGYFHNLALTHKGE 531
V LT G+++ G FG LG + +P RV + + A+A H A+T GE
Sbjct: 96 VALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGE 155
Query: 532 VYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAGWHH 591
+Y+WG + P ++ PS V V + +S G
Sbjct: 156 LYMWG----REEGDGRLGLGPGRGP-----NEGGGLSVPSKVKALTV--PVASVSCGGFF 204
Query: 592 SCIINNMGSIYTWGLNFDGQLGSGD 616
+ + G ++ WG N + +LG GD
Sbjct: 205 TMALTKEGQLWNWGANSNYELGRGD 229
Score = 61.7 bits (143), Expect = 2e-09
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 9/136 (6%)
Query: 410 PLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCG 469
P+ V+ G + + A+ G+L WG + +LG G+ W P V G ++ + CG
Sbjct: 194 PVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACG 253
Query: 470 ACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRV-AL-HEPVRALAAGYFHNLA-- 525
HS+ LT G++ + G GQLG+ +P + AL + + +A+G + A
Sbjct: 254 GYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAIT 313
Query: 526 -----LTHKGEVYVWG 536
LT GE+++WG
Sbjct: 314 GWDWFLTDGGELWMWG 329
Score = 60.9 bits (141), Expect = 4e-09
Identities = 46/152 (30%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 351 VIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGA 409
V V+CG T+ LT+ G L++ G N+ +L + V G
Sbjct: 195 VASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEP---------MPVPSLEGV 245
Query: 410 PLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCG 469
+ +A G YHS A+ G++L+WG G HGQLG ++ +Q P + +K+ + G
Sbjct: 246 RITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASG 305
Query: 470 ACHSV-------LLTRGGELWACGASVFGQLG 494
S LT GGELW G + QLG
Sbjct: 306 GSSSAAITGWDWFLTDGGELWMWGNAKDFQLG 337
Score = 41.1 bits (92), Expect = 0.004
Identities = 38/135 (28%), Positives = 52/135 (38%), Gaps = 10/135 (7%)
Query: 350 RVIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGG 408
R+ +ACG +H+L LTE G + S G GQL V +A G
Sbjct: 246 RITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASG 305
Query: 409 APLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFL-------GR 461
G + D GG L WG QLG+ + + T + FL
Sbjct: 306 GSSSAAITG-WDWFLTD-GGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPH 363
Query: 462 KVQSVGCGACHSVLL 476
KV S+ GA H++ L
Sbjct: 364 KVISISIGASHALCL 378
Score = 30.3 bits (65), Expect = 6.7
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 558 LPFHDDNDRYLA--PSCVDTTNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSG 615
L F D LA P +D + RI IS G HS + + G ++ WG G+LG G
Sbjct: 9 LLFRSDQSFSLAQTPGRIDADSSSFRI-GISCGLFHSGLTID-GDLWIWGKGDGGRLGFG 66
Query: 616 DRKQIQIP 623
+ +P
Sbjct: 67 QENSVFVP 74
>At5g60870.1 68418.m07636 regulator of chromosome condensation
(RCC1) family protein weak similarity to UVB-resistance
protein UVR8 [Arabidopsis thaliana] GI:5478530; contains
Pfam profile PF00415: Regulator of chromosome
condensation (RCC1)
Length = 445
Score = 92.3 bits (219), Expect = 1e-18
Identities = 68/224 (30%), Positives = 105/224 (46%), Gaps = 27/224 (12%)
Query: 413 CVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACH 472
C+A G HS A+ G + TWG+G G LG + P+ V K+ ++ H
Sbjct: 156 CIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTH 215
Query: 473 SVLLTRGGELWACGASV-FGQLGTG------QRGKASLPVRV-ALHEPVRALAAGYFHNL 524
+ +T GEL+ G G+LG G + G S+P +V AL PV +++ G F +
Sbjct: 216 TAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTM 275
Query: 525 ALTHKGEVYVWGA-SPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIV 583
ALT +G+++ WGA S ++ EP +P PS RI
Sbjct: 276 ALTKEGQLWNWGANSNYELGRGDNLGGWEP----MP---------VPSLEGV-----RIT 317
Query: 584 QISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVK 627
QI+ G +HS + G + +WG GQLGS + ++PTE++
Sbjct: 318 QIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIE 361
Score = 75.4 bits (177), Expect = 2e-13
Identities = 55/205 (26%), Positives = 87/205 (42%), Gaps = 14/205 (6%)
Query: 414 VAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACHS 473
++ G +HS + G L WG G G+LG G + + P L F ++ + G HS
Sbjct: 106 ISCGLFHSG-LTIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHS 164
Query: 474 VLLTRGGELWACGASVFGQLGTGQRGKASLPVRV--ALHEPVRALAAGYFHNLALTHKGE 531
V LT G+++ G FG LG + +P RV + + A+A H A+T GE
Sbjct: 165 VALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGE 224
Query: 532 VYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAGWHH 591
+Y+WG + P ++ PS V V + +S G
Sbjct: 225 LYMWG----REEGDGRLGLGPGRGP-----NEGGGLSVPSKVKALTV--PVASVSCGGFF 273
Query: 592 SCIINNMGSIYTWGLNFDGQLGSGD 616
+ + G ++ WG N + +LG GD
Sbjct: 274 TMALTKEGQLWNWGANSNYELGRGD 298
Score = 73.7 bits (173), Expect = 5e-13
Identities = 76/240 (31%), Positives = 108/240 (45%), Gaps = 29/240 (12%)
Query: 414 VAAGHYHSAAVDAGGRLLTWGWGV-HGQLGLG-----NIDDQWTPQLVTKFLGRKVQSVG 467
+A H+AA+ G L WG G+LGLG N + K L V SV
Sbjct: 209 IATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVS 268
Query: 468 CGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHEPVRA--LAAGYFHNLA 525
CG ++ LT+ G+LW GA+ +LG G P+ V E VR +A G +H+LA
Sbjct: 269 CGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLA 328
Query: 526 LTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQI 585
LT +G+V WG + S +L N + P+ ++ + +IV I
Sbjct: 329 LTEEGKVLSWGHGGH----------GQLGSSSLR----NQK--VPTEIEALADK-KIVFI 371
Query: 586 SAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQ-IPTEVKIRT---ETQPHTMKSDS 641
++G S I + G ++ WG D QLG +IQ P EV T E QPH + S S
Sbjct: 372 ASGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISIS 431
Score = 70.1 bits (164), Expect = 7e-12
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
Query: 410 PLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCG 469
P+ V+ G + + A+ G+L WG + +LG G+ W P V G ++ + CG
Sbjct: 263 PVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACG 322
Query: 470 ACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRV-AL-HEPVRALAAGYFHNLALT 527
HS+ LT G++ + G GQLG+ +P + AL + + +A+G + A+T
Sbjct: 323 GYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAIT 382
Query: 528 HKGEVYVWG 536
GE+++WG
Sbjct: 383 DGGELWMWG 391
Score = 68.9 bits (161), Expect = 2e-11
Identities = 45/145 (31%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 351 VIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGA 409
V V+CG T+ LT+ G L++ G N+ +L + V G
Sbjct: 264 VASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEP---------MPVPSLEGV 314
Query: 410 PLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCG 469
+ +A G YHS A+ G++L+WG G HGQLG ++ +Q P + +K+ + G
Sbjct: 315 RITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASG 374
Query: 470 ACHSVLLTRGGELWACGASVFGQLG 494
S +T GGELW G + QLG
Sbjct: 375 GSSSAAITDGGELWMWGNAKDFQLG 399
Score = 47.6 bits (108), Expect = 4e-05
Identities = 39/135 (28%), Positives = 56/135 (41%), Gaps = 17/135 (12%)
Query: 350 RVIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGG 408
R+ +ACG +H+L LTE G + S G GQL +
Sbjct: 315 RITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPT---------EIEALAD 365
Query: 409 APLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFL-------GR 461
+V +A+G SAA+ GG L WG QLG+ + + T + FL
Sbjct: 366 KKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPH 425
Query: 462 KVQSVGCGACHSVLL 476
KV S+ GA H++ L
Sbjct: 426 KVISISIGASHALCL 440
Score = 30.7 bits (66), Expect = 5.0
Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 6/97 (6%)
Query: 531 EVYVWGASPQ-QVXXXXXXXXXEPSS-PTLPFHDDNDRYLA--PSCVDTTNVRGRIVQIS 586
+++ WG Q+ PS L F D LA P +D + RI IS
Sbjct: 49 QLFSWGRGASGQLGGGIEEIRMYPSPVANLLFRSDQSFSLAQTPGRIDADSSSFRI-GIS 107
Query: 587 AGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIP 623
G HS + + G ++ WG G+LG G + +P
Sbjct: 108 CGLFHSGLTID-GDLWIWGKGDGGRLGFGQENSVFVP 143
>At3g02510.1 68416.m00239 regulator of chromosome condensation
(RCC1) family protein similar to UVB-resistance protein
UVR8 [Arabidopsis thaliana] GI:5478530; contains Pfam
profile PF00415: Regulator of chromosome condensation
(RCC1)
Length = 393
Score = 92.3 bits (219), Expect = 1e-18
Identities = 73/239 (30%), Positives = 101/239 (42%), Gaps = 30/239 (12%)
Query: 402 RVRLAGGAPLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQL-----VT 456
RV+ + A G +H AVD GR WG +GQ G + D+ + +
Sbjct: 84 RVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIP 143
Query: 457 KFLGRK--VQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHEPVR 514
K K V+ V G HSV+LTR G +W G G + S+PVRV E VR
Sbjct: 144 KRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQP----WPPGDIKQISVPVRVQGLENVR 199
Query: 515 ALAAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVD 574
+A G FHNLAL G + WG +P+S +P +D L
Sbjct: 200 LIAVGAFHNLALEEDGRLLAWG---NNEYGQLGTGDTQPTSHPVPVQGLDDLTL------ 250
Query: 575 TTNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSG--DRKQIQIPTEVKIRTE 631
V I+AG HS + + G +Y WG G+LG G D+ +P +V + E
Sbjct: 251 --------VDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAE 301
Score = 86.6 bits (205), Expect = 7e-17
Identities = 91/323 (28%), Positives = 135/323 (41%), Gaps = 32/323 (9%)
Query: 350 RVIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGG 408
++ A G H L + + G Y+ G N +GQ V+ R A
Sbjct: 92 KITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDI--VIPKRCAPK 149
Query: 409 APLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGC 468
+ VAAG HS + G + TWG G+I P V V+ +
Sbjct: 150 LTVRQVAAGGTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGL--ENVRLIAV 203
Query: 469 GACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHEPVRA--LAAGYFHNLAL 526
GA H++ L G L A G + +GQLGTG S PV V + + +AAG +H+ AL
Sbjct: 204 GAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTAL 263
Query: 527 THKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQIS 586
T KGEVY WG E L +D + + + P V+ I+Q+S
Sbjct: 264 TDKGEVYGWGRG-------------EHGRLGLGDNDKSSK-MVPQKVNLL-AEEDIIQVS 308
Query: 587 AGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVKIRTETQPHTMKSDSEKTTD 646
G HS + G I+++G G+LG G + P E+ I+ S TD
Sbjct: 309 CGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIKIPP-----PEGSFNHTD 363
Query: 647 ADENMEFNTKALVGCGGDFTVYI 669
+E +++ K+ + CGG T+ I
Sbjct: 364 EEEEGKWSAKS-IACGGRHTLAI 385
Score = 85.4 bits (202), Expect = 2e-16
Identities = 57/180 (31%), Positives = 84/180 (46%), Gaps = 12/180 (6%)
Query: 336 VMMASTPVNTELIGRVIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXX 394
+ S PV + + V +A G H L L E+G L + G+N +GQL
Sbjct: 183 IKQISVPVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQL---------GTGDT 233
Query: 395 XXXXXVLRVRLAGGAPLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNID--DQWTP 452
+ V+ LV +AAG +HS A+ G + WG G HG+LGLG+ D + P
Sbjct: 234 QPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVP 293
Query: 453 QLVTKFLGRKVQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHEP 512
Q V + V CG HSV LTR G +++ G G+LG G++ P+ + + P
Sbjct: 294 QKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIKIP 353
Score = 68.1 bits (159), Expect = 3e-11
Identities = 56/201 (27%), Positives = 90/201 (44%), Gaps = 17/201 (8%)
Query: 430 LLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELWACGASV 489
++ WG G GQLG+G +++ +V V+SV G+ +S+ + G ++ G +
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQ 66
Query: 490 FGQLGTGQRGKA-SLPVRV-AL-HEPVRALAAGYFHNLALTHKGEVYVWGASPQQVXXXX 546
G LG K ++P RV AL + + A G +H LA+ +G Y WG +
Sbjct: 67 RGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGN------EY 120
Query: 547 XXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAGWHHSCIINNMGSIYTWGL 606
EP + D + C VR Q++AG HS ++ G ++TWG
Sbjct: 121 GQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVR----QVAAGGTHSVVLTREGHVWTWGQ 176
Query: 607 NFDGQLGSGDRKQIQIPTEVK 627
+ GD KQI +P V+
Sbjct: 177 PWP----PGDIKQISVPVRVQ 193
Score = 65.7 bits (153), Expect = 1e-10
Identities = 62/225 (27%), Positives = 89/225 (39%), Gaps = 35/225 (15%)
Query: 414 VAAGHYHSAAVDAGGRLLTWGWGVHGQLG-LGNIDDQWTPQLVTKFLGRKVQSVGCGACH 472
V +G +S A+ G + TWGW G LG + P V K+ G H
Sbjct: 43 VVSGSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWH 102
Query: 473 SVLLTRGGELWACGASVFGQ---------LGTGQRGKASLPVRVALHEPVRALAAGYFHN 523
+ + G +A G + +GQ +G R +P R A VR +AAG H+
Sbjct: 103 CLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHS 162
Query: 524 LALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVD-TTNVRGRI 582
+ LT +G V+ WG +P P D + P V NVR
Sbjct: 163 VVLTREGHVWTWG---------------QPWPP-----GDIKQISVPVRVQGLENVR--- 199
Query: 583 VQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVK 627
I+ G H+ + G + WG N GQLG+GD + P V+
Sbjct: 200 -LIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQ 243
Score = 41.9 bits (94), Expect = 0.002
Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 8/129 (6%)
Query: 317 RSLTCGLAHWAVVSDGNARVMMASTPVNTELIGRVIDVACGRHHTLILTENG-LYSAGDN 375
R L G + + G+ + PV ++D+A G H+ LT+ G +Y G
Sbjct: 216 RLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRG 275
Query: 376 TFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGAPLVCVAAGHYHSAAVDAGGRLLTWGW 435
G+L +V L ++ V+ G HS A+ GR+ ++G
Sbjct: 276 EHGRLGLGDNDKSSKMVPQ-------KVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGR 328
Query: 436 GVHGQLGLG 444
G HG+LG G
Sbjct: 329 GDHGRLGYG 337
>At5g16040.1 68418.m01875 regulator of chromosome condensation
(RCC1) family protein similar to UVB-resistance protein
UVR8 [Arabidopsis thaliana] GI:5478530; contains Pfam
profile PF00415: Regulator of chromosome condensation
(RCC1)
Length = 396
Score = 91.5 bits (217), Expect = 3e-18
Identities = 58/180 (32%), Positives = 86/180 (47%), Gaps = 12/180 (6%)
Query: 336 VMMASTPVNTELIGRVIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXX 394
+ S PV + + V +A G H L L E+G L++ G+N +GQL
Sbjct: 183 IKQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQL---------GTGDT 233
Query: 395 XXXXXVLRVRLAGGAPLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNID--DQWTP 452
+ V+ LV +AAG +HS A+ G + WG G HG+LG G+ D + P
Sbjct: 234 QPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLP 293
Query: 453 QLVTKFLGRKVQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHEP 512
Q V G + V CG HSV LTR G +++ G G+LG G++ P+ + +H P
Sbjct: 294 QKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIHIP 353
Score = 89.0 bits (211), Expect = 1e-17
Identities = 73/235 (31%), Positives = 102/235 (43%), Gaps = 30/235 (12%)
Query: 403 VRLAGGAPLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLG-NIDDQWTPQ----LVTK 457
V+ +V A G +H AVD GR WG +GQ G + D+ P ++ K
Sbjct: 85 VKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPK 144
Query: 458 FLGRK--VQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHEPVRA 515
++ V+ V G HSV+LTR G +W G G + S+PVRV E VR
Sbjct: 145 RCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQP----WPPGDIKQISVPVRVQGLENVRL 200
Query: 516 LAAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDT 575
+A G FHNLAL G ++ WG +P S +P +D L
Sbjct: 201 IAVGAFHNLALKEDGTLWAWG---NNEYGQLGTGDTQPRSYPIPVQGLDDLTL------- 250
Query: 576 TNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSG--DRKQIQIPTEVKI 628
V I+AG HS + N G +Y WG G+LG G D+ +P +V +
Sbjct: 251 -------VDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNL 298
Score = 86.6 bits (205), Expect = 7e-17
Identities = 90/324 (27%), Positives = 133/324 (41%), Gaps = 34/324 (10%)
Query: 350 RVIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGG 408
+++ A G H L + + G Y+ G N +GQ V+ R A
Sbjct: 92 KIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDI--VIPKRCAQQ 149
Query: 409 APLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGC 468
+ VAAG HS + G + TWG G+I P V V+ +
Sbjct: 150 LTVRQVAAGGTHSVVLTREGYVWTWGQ----PWPPGDIKQISVPVRVQGL--ENVRLIAV 203
Query: 469 GACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHEPVRA--LAAGYFHNLAL 526
GA H++ L G LWA G + +GQLGTG S P+ V + + +AAG +H+ AL
Sbjct: 204 GAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTAL 263
Query: 527 THKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHD-DNDRYLAPSCVDTTNVRGRIVQI 585
T++GEVY WG L F D D + P V+ I+Q+
Sbjct: 264 TNEGEVYGWGRGEHG---------------RLGFGDNDKSSKMLPQKVNLLAGED-IIQV 307
Query: 586 SAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVKIRTETQPHTMKSDSEKTT 645
S G HS + G I+++G G+LG G + P E+ I T
Sbjct: 308 SCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIHIPPPEGRFNH-----T 362
Query: 646 DADENMEFNTKALVGCGGDFTVYI 669
D +++ ++ K V CGG T+ I
Sbjct: 363 DEEDDGKWIAKH-VACGGRHTLAI 385
Score = 75.8 bits (178), Expect = 1e-13
Identities = 67/225 (29%), Positives = 95/225 (42%), Gaps = 35/225 (15%)
Query: 414 VAAGHYHSAAVDAGGRLLTWGWGVHGQLG-LGNIDDQWTPQLVTKFLGRKVQSVGCGACH 472
V G +S A+ G+L TWGW G LG + TP LV K+ G H
Sbjct: 43 VVGGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWH 102
Query: 473 SVLLTRGGELWACGASVFGQLG-------TGQ--RGKASLPVRVALHEPVRALAAGYFHN 523
+ + G +A G + +GQ G TG+ R +P R A VR +AAG H+
Sbjct: 103 CLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHS 162
Query: 524 LALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVD-TTNVRGRI 582
+ LT +G V+ WG +P P D + P V NVR
Sbjct: 163 VVLTREGYVWTWG---------------QPWPP-----GDIKQISVPVRVQGLENVR--- 199
Query: 583 VQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVK 627
I+ G H+ + G+++ WG N GQLG+GD + P V+
Sbjct: 200 -LIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQ 243
Score = 69.3 bits (162), Expect = 1e-11
Identities = 57/201 (28%), Positives = 88/201 (43%), Gaps = 17/201 (8%)
Query: 430 LLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELWACGASV 489
++ WG G GQLGLG +++ +V V+SV G+ +S+ + G+L+ G +
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66
Query: 490 FGQLGTGQRGKA-SLP--VRVALHEPVRALAAGYFHNLALTHKGEVYVWGASPQQVXXXX 546
G LG K S P V+ + + A G +H LA+ +G Y WG +
Sbjct: 67 RGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGN------EY 120
Query: 547 XXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAGWHHSCIINNMGSIYTWGL 606
EPS D + C VR Q++AG HS ++ G ++TWG
Sbjct: 121 GQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVR----QVAAGGTHSVVLTREGYVWTWGQ 176
Query: 607 NFDGQLGSGDRKQIQIPTEVK 627
+ GD KQI +P V+
Sbjct: 177 PWP----PGDIKQISVPVRVQ 193
Score = 32.3 bits (70), Expect = 1.6
Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 24/130 (18%)
Query: 563 DNDRYLAPSCVDTTNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQI 622
D ++ LA S VD + + G +S I + G ++TWG N G LG
Sbjct: 23 DEEKELA-SVVDALEPFN-VRSVVGGSRNSLAICDDGKLFTWGWNQRGTLGH-------- 72
Query: 623 PTEVKIRTETQPHTMKSDSEKTTDADENMEFNTKALVGCGGDFTVYIDDDGRIYS-TGNT 681
P E K TE+ P +KS + N++ A+ GG + +DD GR Y+ GN
Sbjct: 73 PPETK--TESTPSLVKSLA--------NVKIVQAAI---GGWHCLAVDDQGRAYAWGGNE 119
Query: 682 HLQISNEKTK 691
+ Q E +K
Sbjct: 120 YGQCGEEPSK 129
>At5g42140.1 68418.m05130 zinc finger protein, putative / regulator
of chromosome condensation (RCC1) family protein similar
to zinc finger protein [Arabidopsis thaliana]
gi|15811367|gb|AAL08940
Length = 1073
Score = 89.8 bits (213), Expect = 8e-18
Identities = 75/289 (25%), Positives = 123/289 (42%), Gaps = 21/289 (7%)
Query: 332 GNARVMMASTPVNTELIGRVIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXX 390
G+ ++ P+ + ++ V +ACG H +++ G +++ G+ + G+L
Sbjct: 255 GSRSDVLIPKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWGEASGGRLGHGMGKDVTG 314
Query: 391 XXXXXXXXXVLRVRLAGGAPLVCVAAGHYHSAAVDAGGRLLTWGWGVH--GQLGLGNIDD 448
+ + VA G +H+ AV G + TWG G H G LG G
Sbjct: 315 PQL---------IESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVS 365
Query: 449 QWTPQLVTKFL-GRKVQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRV 507
W P+ ++ L G ++ SV CG H+ L+T G+L+ G FG LG G + P V
Sbjct: 366 HWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREV 425
Query: 508 ALHEPVR--ALAAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDND 565
+R A+A G +H A+ EV V +S V + L H D +
Sbjct: 426 ESLSGLRTIAVACGVWHAAAIV---EVIVTHSS-SSVSSGKLFTWGDGDKSRLG-HGDKE 480
Query: 566 RYLAPSCVDTTNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGS 614
L P+CV + +++ G + + G +YT G GQLG+
Sbjct: 481 PRLKPTCVSAL-IDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLGN 528
Score = 88.2 bits (209), Expect = 2e-17
Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 5/192 (2%)
Query: 350 RVIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGG 408
++ V+CG HT ++T G L++ GD TFG L + + +A G
Sbjct: 380 QIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACG 439
Query: 409 A--PLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSV 466
V HS++ + G+L TWG G +LG G+ + + P V+ + V
Sbjct: 440 VWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFHRV 499
Query: 467 GCGACHSVLLTRGGELWACGASVFGQLGT-GQRGKASLPVRVAL-HEPVRALAAGYFHNL 524
CG +V LT G+++ G++V+GQLG GK V L + V +A G +H
Sbjct: 500 ACGHSLTVGLTTSGKVYTMGSTVYGQLGNPNADGKLPCLVEDKLTKDCVEEIACGAYHVA 559
Query: 525 ALTHKGEVYVWG 536
LT + EV+ WG
Sbjct: 560 VLTSRNEVFTWG 571
Score = 76.6 bits (180), Expect = 8e-14
Identities = 74/290 (25%), Positives = 124/290 (42%), Gaps = 43/290 (14%)
Query: 354 VACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAG---GA 409
VACG HT +T G +Y+ GD T + R++G G
Sbjct: 329 VACGEFHTCAVTMTGEIYTWGDGTHN---------AGLLGHGTDVSHWIPKRISGPLEGL 379
Query: 410 PLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCG 469
+ V+ G +H+A + + G+L T+G G G LG G+ + + P+ V G + +V CG
Sbjct: 380 QIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACG 439
Query: 470 ACHS-----VLLTRG------GELWACGASVFGQLGTGQRGKASLPVRVA--LHEPVRAL 516
H+ V++T G+L+ G +LG G + P V+ + +
Sbjct: 440 VWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFHRV 499
Query: 517 AAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTT 576
A G+ + LT G+VY G++ V + P L D+ L CV+
Sbjct: 500 ACGHSLTVGLTTSGKVYTMGST---VYGQLGNPNADGKLPCLV----EDK-LTKDCVE-- 549
Query: 577 NVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEV 626
+I+ G +H ++ + ++TWG +G+LG GD + + PT V
Sbjct: 550 -------EIACGAYHVAVLTSRNEVFTWGKGANGRLGHGDVEDRKAPTLV 592
Score = 67.7 bits (158), Expect = 4e-11
Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 17/196 (8%)
Query: 435 WGVHGQLG-LGNIDDQWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELWACGASVFGQL 493
+G +G LG+ D P+ + + V + CG H+ L++R GE++ G + G+L
Sbjct: 245 FGADKNIGYLGSRSDVLIPKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWGEASGGRL 304
Query: 494 GTGQRGKASLP--VRVALHEPVRALAAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXX 551
G G + P + + +A G FH A+T GE+Y WG
Sbjct: 305 GHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNAG-------- 356
Query: 552 EPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQ 611
L H + + P + +I +S G H+ +I + G ++T+G G
Sbjct: 357 ------LLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGV 410
Query: 612 LGSGDRKQIQIPTEVK 627
LG GD++ + P EV+
Sbjct: 411 LGHGDKETVFYPREVE 426
Score = 54.8 bits (126), Expect = 3e-07
Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 354 VACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGAPLV 412
VACG T+ LT +G +Y+ G +GQL ++ +L +
Sbjct: 499 VACGHSLTVGLTTSGKVYTMGSTVYGQLGNPNADGKLPC--------LVEDKLTKDC-VE 549
Query: 413 CVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGA 470
+A G YH A + + + TWG G +G+LG G+++D+ P LV R V+++ CG+
Sbjct: 550 EIACGAYHVAVLTSRNEVFTWGKGANGRLGHGDVEDRKAPTLVDALKERHVKNIACGS 607
Score = 53.6 bits (123), Expect = 6e-07
Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Query: 414 VAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACHS 473
VA GH + + G++ T G V+GQLG N D + + K V+ + CGA H
Sbjct: 499 VACGHSLTVGLTTSGKVYTMGSTVYGQLGNPNADGKLPCLVEDKLTKDCVEEIACGAYHV 558
Query: 474 VLLTRGGELWACGASVFGQLGTGQRGKASLPVRV-ALHE-PVRALAAG 519
+LT E++ G G+LG G P V AL E V+ +A G
Sbjct: 559 AVLTSRNEVFTWGKGANGRLGHGDVEDRKAPTLVDALKERHVKNIACG 606
Score = 35.9 bits (79), Expect = 0.13
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 530 GEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAGW 589
G+VY+WG + + + + L D L P +++ NV + I+ G
Sbjct: 229 GDVYIWG---EVLCENVTKFGADKNIGYLGSRSD---VLIPKPLES-NVVLDVHHIACGV 281
Query: 590 HHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIP 623
H+ +++ G ++TWG G+LG G K + P
Sbjct: 282 KHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGP 315
>At3g53830.1 68416.m05947 regulator of chromosome condensation
(RCC1) family protein / UVB-resistance protein-related
contains Pfam PF00415 : Regulator of chromosome
condensation (RCC1); similar to UVB-resistance protein
UVR8 (GIi;10177674) [Arabidopsis thaliana]
Length = 487
Score = 88.6 bits (210), Expect = 2e-17
Identities = 44/133 (33%), Positives = 74/133 (55%), Gaps = 4/133 (3%)
Query: 408 GAPLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVG 467
G + ++ G HSAA+ G L+T+GWG++GQ G GN +DQ P V++ +++SV
Sbjct: 309 GQYIKAISCGGRHSAAITDAGGLITFGWGLYGQCGHGNTNDQLRPMAVSEVKSVRMESVA 368
Query: 468 CGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRV----ALHEPVRALAAGYFHN 523
G H++ ++ G+++A G + FGQLGTG LP + + +A++ G H+
Sbjct: 369 AGLWHTICISSDGKVYAFGGNQFGQLGTGTDHAEILPRLLDGQNLEGKHAKAVSCGARHS 428
Query: 524 LALTHKGEVYVWG 536
L G++ WG
Sbjct: 429 AVLAEDGQLLCWG 441
Score = 74.5 bits (175), Expect = 3e-13
Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 19/172 (11%)
Query: 460 GRKVQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHEPVR--ALA 517
G+ ++++ CG HS +T G L G ++GQ G G P+ V+ + VR ++A
Sbjct: 309 GQYIKAISCGGRHSAAITDAGGLITFGWGLYGQCGHGNTNDQLRPMAVSEVKSVRMESVA 368
Query: 518 AGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTN 577
AG +H + ++ G+VY +G + L D+ L P +D N
Sbjct: 369 AGLWHTICISSDGKVYAFGGN---------------QFGQLGTGTDHAEIL-PRLLDGQN 412
Query: 578 VRGRIVQ-ISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVKI 628
+ G+ + +S G HS ++ G + WG N GQLG GD IPT+V++
Sbjct: 413 LEGKHAKAVSCGARHSAVLAEDGQLLCWGWNKYGQLGLGDTNDRNIPTQVQL 464
Score = 74.1 bits (174), Expect = 4e-13
Identities = 51/177 (28%), Positives = 83/177 (46%), Gaps = 13/177 (7%)
Query: 354 VACGRHHTLILTE-NGLYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGAPLV 412
++CG H+ +T+ GL + G +GQ V VR+
Sbjct: 315 ISCGGRHSAAITDAGGLITFGWGLYGQCGHGNTNDQLRPMAVSE---VKSVRMES----- 366
Query: 413 CVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVT--KFLGRKVQSVGCGA 470
VAAG +H+ + + G++ +G GQLG G + P+L+ G+ ++V CGA
Sbjct: 367 -VAAGLWHTICISSDGKVYAFGGNQFGQLGTGTDHAEILPRLLDGQNLEGKHAKAVSCGA 425
Query: 471 CHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHE-PVRALAAGYFHNLAL 526
HS +L G+L G + +GQLG G ++P +V L +R +A G++H L L
Sbjct: 426 RHSAVLAEDGQLLCWGWNKYGQLGLGDTNDRNIPTQVQLDGCRLRKVACGWWHTLLL 482
Score = 68.9 bits (161), Expect = 2e-11
Identities = 48/159 (30%), Positives = 74/159 (46%), Gaps = 9/159 (5%)
Query: 319 LTCGLAHWAVVSDGNARVMMASTPVNTELIGRVIDVACGRHHTLILTENG-LYSAGDNTF 377
+T G + GN + V+ R+ VA G HT+ ++ +G +Y+ G N F
Sbjct: 332 ITFGWGLYGQCGHGNTNDQLRPMAVSEVKSVRMESVAAGLWHTICISSDGKVYAFGGNQF 391
Query: 378 GQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGAPLVCVAAGHYHSAAVDAGGRLLTWGWGV 437
GQL +L + G V+ G HSA + G+LL WGW
Sbjct: 392 GQL-------GTGTDHAEILPRLLDGQNLEGKHAKAVSCGARHSAVLAEDGQLLCWGWNK 444
Query: 438 HGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACHSVLL 476
+GQLGLG+ +D+ P V + G +++ V CG H++LL
Sbjct: 445 YGQLGLGDTNDRNIPTQV-QLDGCRLRKVACGWWHTLLL 482
Score = 36.3 bits (80), Expect = 0.10
Identities = 51/191 (26%), Positives = 81/191 (42%), Gaps = 44/191 (23%)
Query: 428 GRLLTWGWGVHGQLGLGN-IDDQWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELWACG 486
G++ WG+G GQLGLG+ I +P L+ ++S+G G S +L +GG
Sbjct: 248 GQIWGWGYGGEGQLGLGSRIKMVSSPHLIP-----CLESIGSGKERSFILHQGG---TTT 299
Query: 487 ASVFGQLGTGQRGKASLPVRVALHEPVRALAAGYFHNLALTHKGEV--YVWGASPQQVXX 544
S GQ ++A++ G H+ A+T G + + WG Q
Sbjct: 300 TSAQASREPGQY--------------IKAISCGGRHSAAITDAGGLITFGWGLYGQ---- 341
Query: 545 XXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAGWHHSCIINNMGSIYTW 604
+ ND+ L P V R+ ++AG H+ I++ G +Y +
Sbjct: 342 -------------CGHGNTNDQ-LRPMAVSEVK-SVRMESVAAGLWHTICISSDGKVYAF 386
Query: 605 GLNFDGQLGSG 615
G N GQLG+G
Sbjct: 387 GGNQFGQLGTG 397
Score = 33.5 bits (73), Expect = 0.71
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 582 IVQISAGWHHSCIINNMGSIYTWG 605
+VQ S+GW H ++ G +TWG
Sbjct: 107 VVQASSGWAHCAVVTETGEAFTWG 130
Score = 33.1 bits (72), Expect = 0.94
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 467 GCGACHSVLLTRGGELWACGASVF-GQ--LGTGQRGKASLPVRVALHEPVRALAAGYFHN 523
GCG ++ ++ G+L G++ GQ + +G+ G+ P + PV ++G+ H
Sbjct: 60 GCG--FAMAISEKGKLITWGSTDDEGQSYVASGKHGETPEPFPLPTEAPVVQASSGWAHC 117
Query: 524 LALTHKGEVYVWG 536
+T GE + WG
Sbjct: 118 AVVTETGEAFTWG 130
Score = 32.3 bits (70), Expect = 1.6
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 595 INNMGSIYTWGLNFDGQLGSGDR-KQIQ----IPTEVKIRT-ETQPHTMKSDSEKTTDAD 648
++++G I+ WG +GQLG G R K + IP I + + + + TT A
Sbjct: 244 VSDLGQIWGWGYGGEGQLGLGSRIKMVSSPHLIPCLESIGSGKERSFILHQGGTTTTSAQ 303
Query: 649 ENMEFNTK-ALVGCGGDFTVYIDDDGRIYSTG 679
+ E + CGG + I D G + + G
Sbjct: 304 ASREPGQYIKAISCGGRHSAAITDAGGLITFG 335
Score = 30.7 bits (66), Expect = 5.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 409 APLVCVAAGHYHSAAVDAGGRLLTWGW 435
AP+V ++G H A V G TWGW
Sbjct: 105 APVVQASSGWAHCAVVTETGEAFTWGW 131
Score = 30.3 bits (65), Expect = 6.7
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 582 IVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSG---DRKQIQIPTEVK-IRTET 632
I IS G HS I + G + T+G GQ G G D+ + +EVK +R E+
Sbjct: 312 IKAISCGGRHSAAITDAGGLITFGWGLYGQCGHGNTNDQLRPMAVSEVKSVRMES 366
>At3g47660.1 68416.m05188 regulator of chromosome condensation
(RCC1) family protein contains Pfam domain PF00415:
Regulator of chromosome condensation (RCC1)
Length = 951
Score = 87.0 bits (206), Expect = 5e-17
Identities = 80/296 (27%), Positives = 127/296 (42%), Gaps = 45/296 (15%)
Query: 346 ELIGRVIDVA-CGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRV 403
E G +++A CG HT +T +G LY+ GD V
Sbjct: 344 EFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHN---------AGLLGLGSGASHWKPV 394
Query: 404 RLAG---GAPLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLG 460
R+ G G + ++ G +H+A V + G+L T+G G G LG G+ P+ V G
Sbjct: 395 RILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNG 454
Query: 461 RKVQSVGCGACHSVLL-------TRGGELWACGASVFGQLGTGQRGKASLPVRVALHEPV 513
+ CG HS + T G+L+ G G+LG G +P V +
Sbjct: 455 CRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTT 514
Query: 514 --RALAAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPS 571
+ +A G +AL+ G+VY G + +PS +D APS
Sbjct: 515 SFQQVACGQSITVALSMSGQVYAMGTA-------------DPS---------HDIVRAPS 552
Query: 572 CVDTTNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVK 627
C++ + + +++ G+HH ++N+ +YTWG +GQLG GD + +PT VK
Sbjct: 553 CIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVK 608
Score = 78.2 bits (184), Expect = 3e-14
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 22/196 (11%)
Query: 354 VACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGAPLV 412
++CG ++ +++T+ G +YS G+ + G+L G+ +
Sbjct: 301 ISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDEF---------NGSTVE 351
Query: 413 CVAAGHYHSAAVDAGGRLLTWGWGVH--GQLGLGNIDDQWTP-QLVTKFLGRKVQSVGCG 469
G +H+ AV A G L WG G H G LGLG+ W P +++ + G V+++ CG
Sbjct: 352 LADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCG 411
Query: 470 ACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHEPVRAL--AAGYFHNLAL- 526
H+ +T G+L+ G FG LG G R ++P V R + A G +H+ A+
Sbjct: 412 PWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVV 471
Query: 527 ------THKGEVYVWG 536
T G+++ WG
Sbjct: 472 SVFGEATSSGKLFTWG 487
Score = 64.1 bits (149), Expect = 4e-10
Identities = 51/198 (25%), Positives = 82/198 (41%), Gaps = 19/198 (9%)
Query: 434 GWGVHGQLGLGNI-DDQWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELWACGASVFGQ 492
G G+H ++ D + P+++ + QS+ CG ++VL+T+ G++++ G G+
Sbjct: 268 GGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGR 327
Query: 493 LGTGQRGKASLPVRVALH--EPVRALAAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXX 550
LG G P + V G FH A+T G++Y WG
Sbjct: 328 LGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSG 387
Query: 551 XEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQ-ISAGWHHSCIINNMGSIYTWGLNFD 609
P R L + G V+ IS G H+ + + G ++T+G
Sbjct: 388 ASHWKPV--------RILG-------QMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTF 432
Query: 610 GQLGSGDRKQIQIPTEVK 627
G LG GDR IP EV+
Sbjct: 433 GALGHGDRISTNIPREVE 450
Score = 49.6 bits (113), Expect = 1e-05
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 414 VAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACHS 473
VA G +H A +++ + TWG G +GQLG G+ + + P LV G++V+ V CG+ ++
Sbjct: 566 VACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYT 625
Query: 474 VLL 476
+
Sbjct: 626 ATI 628
Score = 33.5 bits (73), Expect = 0.71
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 8/102 (7%)
Query: 426 AGGRLLTWGWGVHGQL-GLGNIDDQW----TPQLVTKFLGRK-VQSVGCGACHSVLLTRG 479
A G+ +T + GQ+ +G D P + LG+ VQ V CG H +L
Sbjct: 520 ACGQSITVALSMSGQVYAMGTADPSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSK 579
Query: 480 GELWACGASVFGQLGTGQRGKASLP--VRVALHEPVRALAAG 519
E++ G GQLG G +P V+ + VR + G
Sbjct: 580 AEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCG 621
>At3g15430.2 68416.m01958 regulator of chromosome condensation
(RCC1) family protein low similarity to UVB-resistance
protein UVR8 [Arabidopsis thaliana] GI:5478530; contains
Pfam profile PF00415: Regulator of chromosome
condensation (RCC1)
Length = 488
Score = 85.4 bits (202), Expect = 2e-16
Identities = 74/270 (27%), Positives = 115/270 (42%), Gaps = 29/270 (10%)
Query: 352 IDVACGRHHTLILTENGLYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGAPL 411
+ +A G++HTL++ + +YS G + G L + A +
Sbjct: 114 MQIATGKYHTLLINNSKVYSCGVSLSGVLAHGSETTQCVAFTP--------IEFPFPAQV 165
Query: 412 VCVAAGHYHSAAVDAGGRLLTWGWGVHGQLG-LGNIDDQWTPQLVTKFLGRKVQSVGCGA 470
V+A HSA V G++LT G G L + P+LV G + V G
Sbjct: 166 AQVSATQNHSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGL 225
Query: 471 CHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHE---PVRALAAGYFHNLALT 527
+V L+R G + CG++ GQLG G +P V + PV +AAG + LA+T
Sbjct: 226 HFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVT 285
Query: 528 HKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRG-RIVQIS 586
G VY +G+ S H + L P + +G I+++S
Sbjct: 286 QDGSVYSFGS----------------GSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVS 329
Query: 587 AGWHHSCIINNMGSIYTWGLNFDGQLGSGD 616
AG H+ +++ G +YTWG + G LG GD
Sbjct: 330 AGDEHAVALDSNGRVYTWGKGYCGALGHGD 359
Score = 73.7 bits (173), Expect = 5e-13
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 13/195 (6%)
Query: 348 IGRVIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLA 406
IG V+ +A G + L +T++G +YS G + L V++
Sbjct: 268 IGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPR-------VIQAFKR 320
Query: 407 GGAPLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSV 466
G ++ V+AG H+ A+D+ GR+ TWG G G LG G+ +D+ TPQ++ V
Sbjct: 321 KGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQV 380
Query: 467 GCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHE-----PVRALAAGYF 521
+ +L GG L+ G FG LG RG + +R + E V ++ G +
Sbjct: 381 CARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLY 440
Query: 522 HNLALTHKGEVYVWG 536
H + +T +G ++ +G
Sbjct: 441 HTIVVTQRGRIFGFG 455
Score = 66.9 bits (156), Expect = 6e-11
Identities = 71/278 (25%), Positives = 109/278 (39%), Gaps = 27/278 (9%)
Query: 354 VACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGAPLV 412
VA G H T+ L+ G Y+ G NT GQL + P+V
Sbjct: 221 VAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTI--------GPVV 272
Query: 413 CVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFL--GRKVQSVGCGA 470
+AAG + AV G + ++G G + LG G D+ P+++ F G + V G
Sbjct: 273 QIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGD 332
Query: 471 CHSVLLTRGGELWACGASVFGQLGTGQRGKASLP-VRVALHEPVRA-LAAGYFHNLALTH 528
H+V L G ++ G G LG G P V V L+ + + A L
Sbjct: 333 EHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVE 392
Query: 529 KGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAG 588
G +Y +G S P +D+ L P ++ R+ Q+S G
Sbjct: 393 GGLLYGFGWMGF-------------GSLGFPDRGVSDKVLRPRVLECLKPH-RVSQVSTG 438
Query: 589 WHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEV 626
+H+ ++ G I+ +G N QLG + PTE+
Sbjct: 439 LYHTIVVTQRGRIFGFGDNERAQLGHDSLRGCLEPTEI 476
Score = 46.4 bits (105), Expect = 9e-05
Identities = 56/255 (21%), Positives = 99/255 (38%), Gaps = 23/255 (9%)
Query: 414 VAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKF-LGRKVQSVGCGACH 472
+A G YH+ ++ ++ + G + G L G+ Q +F +V V H
Sbjct: 116 IATGKYHTLLIN-NSKVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQNH 174
Query: 473 SVLLTRGGELWACG---ASVFGQLGTGQRGKASLPVRVALHEPVRALAAGYFHNLALTHK 529
S + + G++ CG + G L T + V P + +AAG + L+ +
Sbjct: 175 SAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSRE 234
Query: 530 GEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAGW 589
G Y G++ + L D DR + P V+ G +VQI+AG
Sbjct: 235 GHAYTCGSN---------------THGQLGHGDTLDRPV-PKVVEFLKTIGPVVQIAAGP 278
Query: 590 HHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVKIRTETQPHTMK--SDSEKTTDA 647
+ + GS+Y++G + LG G+++ P ++ H ++ + E
Sbjct: 279 SYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVAL 338
Query: 648 DENMEFNTKALVGCG 662
D N T CG
Sbjct: 339 DSNGRVYTWGKGYCG 353
Score = 37.9 bits (84), Expect = 0.033
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Query: 427 GGRLLTWGWGVHGQLGL---GNIDDQWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELW 483
GG L +GW G LG G D P+++ +V V G H++++T+ G ++
Sbjct: 393 GGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQRGRIF 452
Query: 484 ACGASVFGQLGTGQRGKASLPVRVALH 510
G + QLG P + LH
Sbjct: 453 GFGDNERAQLGHDSLRGCLEPTEIFLH 479
>At3g15430.1 68416.m01957 regulator of chromosome condensation
(RCC1) family protein low similarity to UVB-resistance
protein UVR8 [Arabidopsis thaliana] GI:5478530; contains
Pfam profile PF00415: Regulator of chromosome
condensation (RCC1)
Length = 488
Score = 85.4 bits (202), Expect = 2e-16
Identities = 74/270 (27%), Positives = 115/270 (42%), Gaps = 29/270 (10%)
Query: 352 IDVACGRHHTLILTENGLYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGAPL 411
+ +A G++HTL++ + +YS G + G L + A +
Sbjct: 114 MQIATGKYHTLLINNSKVYSCGVSLSGVLAHGSETTQCVAFTP--------IEFPFPAQV 165
Query: 412 VCVAAGHYHSAAVDAGGRLLTWGWGVHGQLG-LGNIDDQWTPQLVTKFLGRKVQSVGCGA 470
V+A HSA V G++LT G G L + P+LV G + V G
Sbjct: 166 AQVSATQNHSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGL 225
Query: 471 CHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHE---PVRALAAGYFHNLALT 527
+V L+R G + CG++ GQLG G +P V + PV +AAG + LA+T
Sbjct: 226 HFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVT 285
Query: 528 HKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRG-RIVQIS 586
G VY +G+ S H + L P + +G I+++S
Sbjct: 286 QDGSVYSFGS----------------GSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVS 329
Query: 587 AGWHHSCIINNMGSIYTWGLNFDGQLGSGD 616
AG H+ +++ G +YTWG + G LG GD
Sbjct: 330 AGDEHAVALDSNGRVYTWGKGYCGALGHGD 359
Score = 73.7 bits (173), Expect = 5e-13
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 13/195 (6%)
Query: 348 IGRVIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLA 406
IG V+ +A G + L +T++G +YS G + L V++
Sbjct: 268 IGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPR-------VIQAFKR 320
Query: 407 GGAPLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSV 466
G ++ V+AG H+ A+D+ GR+ TWG G G LG G+ +D+ TPQ++ V
Sbjct: 321 KGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQV 380
Query: 467 GCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHE-----PVRALAAGYF 521
+ +L GG L+ G FG LG RG + +R + E V ++ G +
Sbjct: 381 CARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLY 440
Query: 522 HNLALTHKGEVYVWG 536
H + +T +G ++ +G
Sbjct: 441 HTIVVTQRGRIFGFG 455
Score = 66.9 bits (156), Expect = 6e-11
Identities = 71/278 (25%), Positives = 109/278 (39%), Gaps = 27/278 (9%)
Query: 354 VACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGAPLV 412
VA G H T+ L+ G Y+ G NT GQL + P+V
Sbjct: 221 VAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTI--------GPVV 272
Query: 413 CVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFL--GRKVQSVGCGA 470
+AAG + AV G + ++G G + LG G D+ P+++ F G + V G
Sbjct: 273 QIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGD 332
Query: 471 CHSVLLTRGGELWACGASVFGQLGTGQRGKASLP-VRVALHEPVRA-LAAGYFHNLALTH 528
H+V L G ++ G G LG G P V V L+ + + A L
Sbjct: 333 EHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVE 392
Query: 529 KGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAG 588
G +Y +G S P +D+ L P ++ R+ Q+S G
Sbjct: 393 GGLLYGFGWMGF-------------GSLGFPDRGVSDKVLRPRVLECLKPH-RVSQVSTG 438
Query: 589 WHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEV 626
+H+ ++ G I+ +G N QLG + PTE+
Sbjct: 439 LYHTIVVTQRGRIFGFGDNERAQLGHDSLRGCLEPTEI 476
Score = 46.4 bits (105), Expect = 9e-05
Identities = 56/255 (21%), Positives = 99/255 (38%), Gaps = 23/255 (9%)
Query: 414 VAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKF-LGRKVQSVGCGACH 472
+A G YH+ ++ ++ + G + G L G+ Q +F +V V H
Sbjct: 116 IATGKYHTLLIN-NSKVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQNH 174
Query: 473 SVLLTRGGELWACG---ASVFGQLGTGQRGKASLPVRVALHEPVRALAAGYFHNLALTHK 529
S + + G++ CG + G L T + V P + +AAG + L+ +
Sbjct: 175 SAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSRE 234
Query: 530 GEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAGW 589
G Y G++ + L D DR + P V+ G +VQI+AG
Sbjct: 235 GHAYTCGSN---------------THGQLGHGDTLDRPV-PKVVEFLKTIGPVVQIAAGP 278
Query: 590 HHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVKIRTETQPHTMK--SDSEKTTDA 647
+ + GS+Y++G + LG G+++ P ++ H ++ + E
Sbjct: 279 SYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVAL 338
Query: 648 DENMEFNTKALVGCG 662
D N T CG
Sbjct: 339 DSNGRVYTWGKGYCG 353
Score = 37.9 bits (84), Expect = 0.033
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Query: 427 GGRLLTWGWGVHGQLGL---GNIDDQWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELW 483
GG L +GW G LG G D P+++ +V V G H++++T+ G ++
Sbjct: 393 GGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQRGRIF 452
Query: 484 ACGASVFGQLGTGQRGKASLPVRVALH 510
G + QLG P + LH
Sbjct: 453 GFGDNERAQLGHDSLRGCLEPTEIFLH 479
>At1g27060.1 68414.m03299 regulator of chromosome condensation
(RCC1) family protein low similiarity to UVB-resistance
protein UVR8 [Arabidopsis thaliana] GI:5478530; contains
Pfam profile PF00415: Regulator of chromosome
condensation (RCC1)
Length = 386
Score = 84.2 bits (199), Expect = 4e-16
Identities = 60/199 (30%), Positives = 93/199 (46%), Gaps = 17/199 (8%)
Query: 414 VAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACHS 473
+A G H A+ +GG++ TWG G GQLG G+I + P+LV+ F + G HS
Sbjct: 53 LACGGAHVIALTSGGKVFTWGRGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHS 112
Query: 474 VLLTRGGELWACGASVFGQLGTGQRGKASLPVRVA--LHEPVRALAAGYFHNLALTHKGE 531
++ G ++ CG FGQLG G S P +V+ ++ V+ +A G H+L L +
Sbjct: 113 GFVSDSGCIFTCGNGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQ 172
Query: 532 VYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAGWHH 591
V +G+ + L F D + + CV + +V+ISA H
Sbjct: 173 VCGFGSGKR---------------GQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDH 217
Query: 592 SCIINNMGSIYTWGLNFDG 610
S I+ G ++WG F G
Sbjct: 218 SAAISADGQFFSWGRGFCG 236
Score = 70.1 bits (164), Expect = 7e-12
Identities = 70/281 (24%), Positives = 115/281 (40%), Gaps = 32/281 (11%)
Query: 351 VIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGA 409
+ A G H+ ++++G +++ G+ +FGQL +V
Sbjct: 102 ITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGHGDTLSLSTPA---------KVSHFNND 152
Query: 410 PLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGN--IDDQWTPQLVTKFLGRKVQSVG 467
+ VA G HS + AG ++ +G G GQLG + I P +V+ +V +
Sbjct: 153 SVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRIS 212
Query: 468 CGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHEPVRALAAGYFHNLALT 527
HS ++ G+ ++ G G G SLP ++ E +A G+ H L LT
Sbjct: 213 ANGDHSAAISADGQFFSWGRGFCG--GPDVHAPQSLPSPLSFRE----VAVGWNHALLLT 266
Query: 528 HKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISA 587
GEV+ G++ + +P L D+ L D V+ ++QI+A
Sbjct: 267 VDGEVFKLGSTLNK----------QPEKQQLQI--DSSEALFEKVPDFDGVK--VMQIAA 312
Query: 588 GWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVKI 628
G HS + G + TWG GQLG G+ P V +
Sbjct: 313 GAEHSAAVTENGEVKTWGWGEHGQLGLGNTNDQTSPELVSL 353
Score = 67.7 bits (158), Expect = 4e-11
Identities = 56/236 (23%), Positives = 98/236 (41%), Gaps = 21/236 (8%)
Query: 432 TWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELWACGASVFG 491
+WG G GQLG + D+ PQL++ + + CG H + LT GG+++ G G
Sbjct: 19 SWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRGSSG 78
Query: 492 QLGTGQRGKASLPVRVALHEP--VRALAAGYFHNLALTHKGEVYVWGASPQQVXXXXXXX 549
QLG G +LP V+ + + AAG+ H+ ++ G ++ G
Sbjct: 79 QLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNG--SFGQLGHGD 136
Query: 550 XXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFD 609
S+P H +ND + ++ G HS ++ + +G
Sbjct: 137 TLSLSTPAKVSHFNND---------------SVKMVACGMRHSLVLFAGNQVCGFGSGKR 181
Query: 610 GQLG-SGDR-KQIQIPTEVKIRTETQPHTMKSDSEKTTDADENMEFNTKALVGCGG 663
GQLG S DR K + +P V + + + ++ + + + +F + CGG
Sbjct: 182 GQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWGRGFCGG 237
Score = 67.3 bits (157), Expect = 5e-11
Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 408 GAPLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTK---FLGRKVQ 464
G ++ +AAG HSAAV G + TWGWG HGQLGLGN +DQ +P+LV+ L K
Sbjct: 304 GVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQLGLGNTNDQTSPELVSLGSIDLRTKEI 363
Query: 465 SVGCGACHSVLLTRGGEL 482
V CG+ + + R EL
Sbjct: 364 KVYCGSGFTYAVKRKQEL 381
Score = 60.9 bits (141), Expect = 4e-09
Identities = 47/149 (31%), Positives = 67/149 (44%), Gaps = 21/149 (14%)
Query: 481 ELWACGASVFGQLGTGQRGKASLPVRVALHE--PVRALAAGYFHNLALTHKGEVYVWG-A 537
++W+ GA GQLGT + LP ++L + LA G H +ALT G+V+ WG
Sbjct: 16 QVWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRG 75
Query: 538 SPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAGWHHSCIINN 597
S Q+ P + F DD+ I Q +AGW HS +++
Sbjct: 76 SSGQLGHGDILNITLPK--LVSFFDDS----------------VITQAAAGWSHSGFVSD 117
Query: 598 MGSIYTWGLNFDGQLGSGDRKQIQIPTEV 626
G I+T G GQLG GD + P +V
Sbjct: 118 SGCIFTCGNGSFGQLGHGDTLSLSTPAKV 146
>At3g03790.2 68416.m00389 ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein similar
to hect domain and RLD 2 GB:NP_004658 [Homo sapiens];
contains Pfam PF00415: Regulator of chromosome
condensation (RCC1); contains Pfam PF00023: Ankyrin
repeat; similar to rjs (GI:3414809) [Mus musculus];
similar to HERC2 (GI:4079809) [Homo sapiens]
Length = 1081
Score = 80.6 bits (190), Expect = 5e-15
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 25/213 (11%)
Query: 402 RVRLAGGAPLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQ------WTPQLV 455
RV G + V+A +HS A+ G + TWG+G G+LG D TP+ V
Sbjct: 179 RVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQV 238
Query: 456 TKFLG-RKVQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRV-ALHEPV 513
LG R+V++V H+V+ T GG+++ G++ GQLG + P +V +L +
Sbjct: 239 ISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSLKAKI 298
Query: 514 RALAAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCV 573
A++A H ++ GEV+ WG + + SP L V
Sbjct: 299 VAVSAANKHTAVVSDCGEVFTWGCNKEGQLGYGTSNSASNYSPRL--------------V 344
Query: 574 DTTNVRGRI-VQISAGWHHSCIINNMGSIYTWG 605
D ++G++ I++ +H+ ++ N G +YTWG
Sbjct: 345 D--YLKGKVFTAIASSKYHTLVLRNDGEVYTWG 375
Score = 74.9 bits (176), Expect = 2e-13
Identities = 59/219 (26%), Positives = 93/219 (42%), Gaps = 19/219 (8%)
Query: 329 VSDGNARVMMASTPVNTELIGRVIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXX 387
+ G A V+ ++ RV VA +HHT+I TE G +Y+ G N GQL
Sbjct: 225 IHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDT 284
Query: 388 XXXXXXXXXXXXVLRVRLAGGAPLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLG--N 445
A +V V+A + H+A V G + TWG GQLG G N
Sbjct: 285 QATPRKVTSLK----------AKIVAVSAANKHTAVVSDCGEVFTWGCNKEGQLGYGTSN 334
Query: 446 IDDQWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELWACGASVFGQ----LGTGQRGKA 501
++P+LV G+ ++ H+++L GE++ G + + +
Sbjct: 335 SASNYSPRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTWGHRLVTPRRVIISRNLKKAG 394
Query: 502 SLPVRVALHEPVR--ALAAGYFHNLALTHKGEVYVWGAS 538
+ + P+R A+AAG H+LAL G + W +S
Sbjct: 395 NTLLNFHRRRPLRLTAIAAGMVHSLALAEDGAFFYWVSS 433
Score = 72.9 bits (171), Expect = 1e-12
Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 29/196 (14%)
Query: 430 LLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELWACGASV 489
+ +WG G + QLG GN Q P V G ++ V HSV ++ GE++ G
Sbjct: 155 VFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFGR 214
Query: 490 FGQLGTGQ----RGKASL--PVRVAL---HEPVRALAAGYFHNLALTHKGEVYVWGASPQ 540
G+LG + G+A++ P +V V+A+AA H + T G+VY WG++ +
Sbjct: 215 GGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNRE 274
Query: 541 -QVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAGWHHSCIINNMG 599
Q+ P T+++ +IV +SA H+ ++++ G
Sbjct: 275 GQLGYTSVDTQATPRK-------------------VTSLKAKIVAVSAANKHTAVVSDCG 315
Query: 600 SIYTWGLNFDGQLGSG 615
++TWG N +GQLG G
Sbjct: 316 EVFTWGCNKEGQLGYG 331
Score = 64.9 bits (151), Expect = 3e-10
Identities = 56/202 (27%), Positives = 86/202 (42%), Gaps = 27/202 (13%)
Query: 483 WACGASVFGQLGTGQRGKASLPVRV-ALHEP-VRALAAGYFHNLALTHKGEVYVWGASPQ 540
W GA+ QLGTG + +P RV +LH ++ ++A FH++A++ GEVY WG
Sbjct: 158 WGNGANY--QLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFG-- 213
Query: 541 QVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAGWHHSCIINNMGS 600
P H + P V + R+ ++A HH+ I G
Sbjct: 214 --------RGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGD 265
Query: 601 IYTWGLNFDGQLGSGDRKQIQIPTEVKIRTETQPHTMKSDSEKTTDADENMEFNTKALVG 660
+YTWG N +GQLG + T+ P + S K A +T +
Sbjct: 266 VYTWGSNREGQLG-----------YTSVDTQATPRKVTSLKAKIV-AVSAANKHTAVVSD 313
Query: 661 CGGDFTVYIDDDGRI-YSTGNT 681
CG FT + +G++ Y T N+
Sbjct: 314 CGEVFTWGCNKEGQLGYGTSNS 335
>At3g03790.1 68416.m00388 ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein similar
to hect domain and RLD 2 GB:NP_004658 [Homo sapiens];
contains Pfam PF00415: Regulator of chromosome
condensation (RCC1); contains Pfam PF00023: Ankyrin
repeat; similar to rjs (GI:3414809) [Mus musculus];
similar to HERC2 (GI:4079809) [Homo sapiens]
Length = 1078
Score = 80.6 bits (190), Expect = 5e-15
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 25/213 (11%)
Query: 402 RVRLAGGAPLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQ------WTPQLV 455
RV G + V+A +HS A+ G + TWG+G G+LG D TP+ V
Sbjct: 176 RVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQV 235
Query: 456 TKFLG-RKVQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRV-ALHEPV 513
LG R+V++V H+V+ T GG+++ G++ GQLG + P +V +L +
Sbjct: 236 ISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSLKAKI 295
Query: 514 RALAAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCV 573
A++A H ++ GEV+ WG + + SP L V
Sbjct: 296 VAVSAANKHTAVVSDCGEVFTWGCNKEGQLGYGTSNSASNYSPRL--------------V 341
Query: 574 DTTNVRGRI-VQISAGWHHSCIINNMGSIYTWG 605
D ++G++ I++ +H+ ++ N G +YTWG
Sbjct: 342 D--YLKGKVFTAIASSKYHTLVLRNDGEVYTWG 372
Score = 74.9 bits (176), Expect = 2e-13
Identities = 59/219 (26%), Positives = 93/219 (42%), Gaps = 19/219 (8%)
Query: 329 VSDGNARVMMASTPVNTELIGRVIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXX 387
+ G A V+ ++ RV VA +HHT+I TE G +Y+ G N GQL
Sbjct: 222 IHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDT 281
Query: 388 XXXXXXXXXXXXVLRVRLAGGAPLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLG--N 445
A +V V+A + H+A V G + TWG GQLG G N
Sbjct: 282 QATPRKVTSLK----------AKIVAVSAANKHTAVVSDCGEVFTWGCNKEGQLGYGTSN 331
Query: 446 IDDQWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELWACGASVFGQ----LGTGQRGKA 501
++P+LV G+ ++ H+++L GE++ G + + +
Sbjct: 332 SASNYSPRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTWGHRLVTPRRVIISRNLKKAG 391
Query: 502 SLPVRVALHEPVR--ALAAGYFHNLALTHKGEVYVWGAS 538
+ + P+R A+AAG H+LAL G + W +S
Sbjct: 392 NTLLNFHRRRPLRLTAIAAGMVHSLALAEDGAFFYWVSS 430
Score = 72.9 bits (171), Expect = 1e-12
Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 29/196 (14%)
Query: 430 LLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELWACGASV 489
+ +WG G + QLG GN Q P V G ++ V HSV ++ GE++ G
Sbjct: 152 VFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFGR 211
Query: 490 FGQLGTGQ----RGKASL--PVRVAL---HEPVRALAAGYFHNLALTHKGEVYVWGASPQ 540
G+LG + G+A++ P +V V+A+AA H + T G+VY WG++ +
Sbjct: 212 GGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNRE 271
Query: 541 -QVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAGWHHSCIINNMG 599
Q+ P T+++ +IV +SA H+ ++++ G
Sbjct: 272 GQLGYTSVDTQATPRK-------------------VTSLKAKIVAVSAANKHTAVVSDCG 312
Query: 600 SIYTWGLNFDGQLGSG 615
++TWG N +GQLG G
Sbjct: 313 EVFTWGCNKEGQLGYG 328
Score = 64.9 bits (151), Expect = 3e-10
Identities = 56/202 (27%), Positives = 86/202 (42%), Gaps = 27/202 (13%)
Query: 483 WACGASVFGQLGTGQRGKASLPVRV-ALHEP-VRALAAGYFHNLALTHKGEVYVWGASPQ 540
W GA+ QLGTG + +P RV +LH ++ ++A FH++A++ GEVY WG
Sbjct: 155 WGNGANY--QLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFG-- 210
Query: 541 QVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAGWHHSCIINNMGS 600
P H + P V + R+ ++A HH+ I G
Sbjct: 211 --------RGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGD 262
Query: 601 IYTWGLNFDGQLGSGDRKQIQIPTEVKIRTETQPHTMKSDSEKTTDADENMEFNTKALVG 660
+YTWG N +GQLG + T+ P + S K A +T +
Sbjct: 263 VYTWGSNREGQLG-----------YTSVDTQATPRKVTSLKAKIV-AVSAANKHTAVVSD 310
Query: 661 CGGDFTVYIDDDGRI-YSTGNT 681
CG FT + +G++ Y T N+
Sbjct: 311 CGEVFTWGCNKEGQLGYGTSNS 332
>At1g65920.1 68414.m07480 regulator of chromosome condensation
(RCC1) family protein / zinc finger protein-related
contains Pfam profiles: regulator of chromosome
condensation (RCC1), PF01363 FYVE zinc finger
Length = 1006
Score = 79.0 bits (186), Expect = 1e-14
Identities = 55/192 (28%), Positives = 85/192 (44%), Gaps = 6/192 (3%)
Query: 351 VIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGG- 408
V+ VACG HT I+T +G L++ G TFG L + + ++ G
Sbjct: 397 VLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGP 456
Query: 409 --APLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSV 466
+ A + G+L TWG G G+LG + + P VT+ + V
Sbjct: 457 WHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKV 516
Query: 467 GCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVA--LHEPVRALAAGYFHNL 524
CG +V L+ G ++ G+S+ GQLG + S+ V + + V+ +A+G H
Sbjct: 517 SCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDKSVNVVLGNLTRQFVKDIASGSHHVA 576
Query: 525 ALTHKGEVYVWG 536
LT G VY WG
Sbjct: 577 VLTSFGNVYTWG 588
Score = 75.4 bits (177), Expect = 2e-13
Identities = 63/237 (26%), Positives = 103/237 (43%), Gaps = 31/237 (13%)
Query: 405 LAGGAPLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQ 464
L G ++ VA G +H+A V + G+L T+G G G LG G+++ P+ V KV
Sbjct: 391 LGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVI 450
Query: 465 SVGCGACHSVLLTRG------------GELWACGASVFGQLGTGQRGKASLPVRVA--LH 510
SV CG H+ + G+L+ G G+LG + +P V +
Sbjct: 451 SVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELID 510
Query: 511 EPVRALAAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAP 570
++ G+ +AL+ G VY G+S + P D+ +
Sbjct: 511 HDFIKVSCGWTLTVALSISGTVYTMGSS----------IHGQLGCPRA-----KDK--SV 553
Query: 571 SCVDTTNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVK 627
+ V R + I++G HH ++ + G++YTWG +GQLG GD + P V+
Sbjct: 554 NVVLGNLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNSPVLVE 610
Score = 68.1 bits (159), Expect = 3e-11
Identities = 63/253 (24%), Positives = 106/253 (41%), Gaps = 29/253 (11%)
Query: 430 LLTWGWGVHGQL-GLGNIDDQWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELWACGAS 488
++ WG + G + G N +D +P+L+ VQS+ GA H+ L+TR GE++ G
Sbjct: 261 IMIWG-AITGLIDGSKNQNDALSPKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGNG 319
Query: 489 VFGQLGTGQRGKASLPVRVALHE--PVRALAAGYFHNLALTHKGEVYVWGASPQQVXXXX 546
G+LG P RV E VR++A A+T GE+Y+WG +
Sbjct: 320 NSGKLGLKVNIDIDHPKRVESLEDVAVRSVACSDHQTCAVTESGELYLWGIDGGTI---- 375
Query: 547 XXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAGWHHSCIINNMGSIYTWGL 606
++L D ++ ++ G H+ I+ + G ++T+G
Sbjct: 376 --------------EQSGSQFLTRKISDVLGGSLTVLSVACGAWHTAIVTSSGQLFTYGS 421
Query: 607 NFDGQLGSGDRKQIQIPTEVKIRTETQPHTMKSDSEKTT----DADENMEFNTKALVGCG 662
G LG G + + P EV+ + ++ T A++ +N K+ CG
Sbjct: 422 GTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETANDRKFYNAKS---CG 478
Query: 663 GDFTVYIDDDGRI 675
FT D GR+
Sbjct: 479 KLFTWGDGDKGRL 491
Score = 60.9 bits (141), Expect = 4e-09
Identities = 80/319 (25%), Positives = 131/319 (41%), Gaps = 58/319 (18%)
Query: 414 VAAGHYHSAAVDAGGRLLTWGWGVHGQLGLG-NIDDQWTPQLVTKFLGRKVQSVGCGACH 472
++ G H+A V G + WG G G+LGL NID P+ V V+SV C
Sbjct: 297 ISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDID-HPKRVESLEDVAVRSVACSDHQ 355
Query: 473 SVLLTRGGE--LWACGASVFGQLGTGQRGKASLPVRVALHEPVRALAAGYFHNLALTHKG 530
+ +T GE LW Q G+ Q + + V ++A G +H +T G
Sbjct: 356 TCAVTESGELYLWGIDGGTIEQSGS-QFLTRKISDVLGGSLTVLSVACGAWHTAIVTSSG 414
Query: 531 EVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAG-W 589
+++ +G+ V H + P V++ R +++ +S G W
Sbjct: 415 QLFTYGSGTFGVLG----------------HGSLESVTKPKEVESLR-RMKVISVSCGPW 457
Query: 590 HHSCII-----------NNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVKIRTETQPHTMK 638
H + I+ + G ++TWG G+LG D K+ +PT V TE H
Sbjct: 458 HTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCV---TELIDH--- 511
Query: 639 SDSEKTTDADENMEFNTKALVGCGGDFTVYIDDDGRIYSTGNT-HLQISNEKTKGGN-RV 696
D K V CG TV + G +Y+ G++ H Q+ + K + V
Sbjct: 512 -DFIK---------------VSCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDKSVNV 555
Query: 697 IMMKTTKRVIKIPASRTNH 715
++ T++ +K AS ++H
Sbjct: 556 VLGNLTRQFVKDIASGSHH 574
Score = 56.4 bits (130), Expect = 9e-08
Identities = 24/56 (42%), Positives = 38/56 (67%)
Query: 414 VAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCG 469
+A+G +H A + + G + TWG G++GQLGLG++ D+ +P LV R V+S+ CG
Sbjct: 568 IASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNSPVLVEPLGDRLVESIACG 623
>At3g02300.1 68416.m00212 regulator of chromosome condensation
(RCC1) family protein weak similarity to UVB-resistance
protein UVR8 [Arabidopsis thaliana] GI:5478530; contains
Pfam profile PF00415: Regulator of chromosome
condensation (RCC1)
Length = 471
Score = 78.2 bits (184), Expect = 3e-14
Identities = 61/200 (30%), Positives = 86/200 (43%), Gaps = 18/200 (9%)
Query: 354 VACGRHHTLILTENGLYSA-GDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGAPLV 412
V+CG H + L+E GL A G N GQL ++
Sbjct: 171 VSCGTAHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIM 230
Query: 413 CVAAGHYHSAAVDAGGRLLTWGWGVHGQLG---LGNIDDQWTPQLVTKFLGRKVQSVGCG 469
++ G YH+AA+ G + TWG G GQLG L + D + P+ V G ++ V CG
Sbjct: 231 QLSCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACG 290
Query: 470 ACHSVLLTRGGELWACGASVFGQLGTG-QRG------------KASLPVRVALHEPVRAL 516
H+ L+ G L+A G GQLG G Q G ++PV V + VR +
Sbjct: 291 GVHTCALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLV-IPTDVRLV 349
Query: 517 AAGYFHNLALTHKGEVYVWG 536
A G+ H L +G + WG
Sbjct: 350 ACGHSHTLVYMREGRICGWG 369
Score = 69.7 bits (163), Expect = 9e-12
Identities = 61/217 (28%), Positives = 95/217 (43%), Gaps = 20/217 (9%)
Query: 414 VAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGA-CH 472
++ G H+AAV + G L WG +GQLG G + P+ V + V+ V CGA C
Sbjct: 66 ISCGREHTAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAFCT 125
Query: 473 SVLL---TRGGELWACGASVFGQLGTGQRGKASLPVRVALHEPVRALAAGYFHNLALTHK 529
+ + G L V+GQ G +R ++ G H +AL+ +
Sbjct: 126 AAIAEPRENDGTLSTSRLWVWGQ-NQGSNLPRLFSGAFPATTAIRQVSCGTAHVVALSEE 184
Query: 530 GEVYVWGASPQ-QVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAG 588
G + WG + Q Q+ + + D AP V +I+Q+S G
Sbjct: 185 GLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDE--APELV-------KIMQLSCG 235
Query: 589 WHHSCIINNMGSIYTWGLNFDGQLG-----SGDRKQI 620
+H+ +++ G +YTWGL GQLG SGD++ I
Sbjct: 236 EYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELI 272
Score = 65.3 bits (152), Expect = 2e-10
Identities = 90/357 (25%), Positives = 136/357 (38%), Gaps = 53/357 (14%)
Query: 350 RVIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGG 408
R +D++CGR HT + +G L++ G N +GQL ++ G
Sbjct: 62 RWLDISCGREHTAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCG 121
Query: 409 APLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGC 468
A A + + RL W WG + L + P ++ V C
Sbjct: 122 AFCTAAIAEPRENDGTLSTSRL--WVWGQNQGSNLPRLFSGAFPATTA------IRQVSC 173
Query: 469 GACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVA------LHE-----PVRALA 517
G H V L+ G L A G + GQLG G + RV L E + L+
Sbjct: 174 GTAHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLS 233
Query: 518 AGYFHNLALTHKGEVYVWG-ASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTT 576
G +H AL+ GEVY WG S Q+ D+ L P V
Sbjct: 234 CGEYHTAALSDAGEVYTWGLGSMGQLGHVSL--------------QSGDKELIPRRV--V 277
Query: 577 NVRG-RIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVKIRTETQPH 635
+ G + +++ G H+C ++ G++Y WG GQLG G +
Sbjct: 278 GLDGVSMKEVACGGVHTCALSLEGALYAWGGGQAGQLGLGPQSGFFF------------- 324
Query: 636 TMKSDSEKTTDADENMEFNTKA-LVGCGGDFTVYIDDDGRIYSTG-NTHLQISNEKT 690
++ + SE + T LV CG T+ +GRI G N++ Q +NEK+
Sbjct: 325 SVSNGSEMLLRNVPVLVIPTDVRLVACGHSHTLVYMREGRICGWGYNSYGQAANEKS 381
Score = 60.5 bits (140), Expect = 5e-09
Identities = 55/194 (28%), Positives = 82/194 (42%), Gaps = 19/194 (9%)
Query: 346 ELIGRVIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVR 404
EL+ +++ ++CG +HT L++ G +Y+ G + GQL RV
Sbjct: 225 ELV-KIMQLSCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPR------RVV 277
Query: 405 LAGGAPLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLG----------NIDDQWTPQL 454
G + VA G H+ A+ G L WG G GQLGLG N + +
Sbjct: 278 GLDGVSMKEVACGGVHTCALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNV 337
Query: 455 VTKFLGRKVQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVA-LHEPV 513
+ V+ V CG H+++ R G + G + +GQ + A P V V
Sbjct: 338 PVLVIPTDVRLVACGHSHTLVYMREGRICGWGYNSYGQAANEKSSYAWYPSPVDWCVGQV 397
Query: 514 RALAAGYFHNLALT 527
R LAAG H+ LT
Sbjct: 398 RKLAAGGGHSAVLT 411
>At5g11580.1 68418.m01350 UVB-resistance protein-related / regulator
of chromosome condensation (RCC1) family protein
contains Pfam PF00415 : Regulator of chromosome
condensation (RCC1); similar to rjs protein (GI:3414809)
[Mus musculus]; similar to HERC2 (GI:4079809) [Homo
sapiens];similar to UVB-resistance protein UVR8
(GI:10177674) {Arabidopsis thaliana}
Length = 553
Score = 77.4 bits (182), Expect = 4e-14
Identities = 75/276 (27%), Positives = 118/276 (42%), Gaps = 26/276 (9%)
Query: 400 VLRVRLAGGAPLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKF- 458
VL+V + V G H L +WG HGQLGLG+ + + PQ V F
Sbjct: 199 VLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQTVETFN 258
Query: 459 --LGRKVQSVGCGACHSVLLT------RGGEL-WACGASVFGQLGTGQRGKASLPVRVA- 508
G V + CGA H+ LLT +G + W G GQLG +SLP V+
Sbjct: 259 QKSGLTVYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSNKSSSLPEPVSD 318
Query: 509 --LHEPVRALAAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDR 566
H + ++ G FH ++ +G V+ WG + + + DD+
Sbjct: 319 LPEHAYLVSVDCGLFHTSVVSSEGYVWSWGME------RGLGLCPDVNFTEVEAGDDS-- 370
Query: 567 YLAPSCVDTTNVRGR-IVQISAGWHHSCIINNMG-SIYTWGLNFDGQLGSGDRKQIQIPT 624
P + + R R VQ+S G H+ ++ + G +++WG +G LG+G+ +PT
Sbjct: 371 --VPRKISGGSSRFRDPVQVSCGAAHTVLVVDGGYKLWSWGRGRNGVLGTGNVSDCYVPT 428
Query: 625 EVKIRTETQPHTMK-SDSEKTTDADENMEFNTKALV 659
V E +P + D K+ +E +K +V
Sbjct: 429 LVFWPNELKPEKEEVPDDGKSASTEEIKRLESKLMV 464
Score = 74.1 bits (174), Expect = 4e-13
Identities = 62/241 (25%), Positives = 104/241 (43%), Gaps = 27/241 (11%)
Query: 411 LVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLV---TKFLGRKVQSVG 467
++ +AAG H+ A+ G + +WG G+ G+LG G D+ P LV + G +++ VG
Sbjct: 18 IISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRIRIVG 77
Query: 468 --CGACHSVLLTRGGELWACGASVFGQLG-TGQRGKASLPVR------------------ 506
GA HS+ ++ G +W G +++GQLG G+ A ++
Sbjct: 78 VAAGAYHSLAVSDDGSVWCWGYNIYGQLGFDGENSLAPCLIKNLFERETSSSSLNDSGRE 137
Query: 507 VALHEPVRALAAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDR 566
V V + AG +LA+ + G +++WG P Q P D + R
Sbjct: 138 VGSDLKVCTVKAGSMMSLAIDNVGGLWMWGNVPPQDSEPDPRLSFTSIPIPFPILDFHGR 197
Query: 567 YLAPSCVDTTNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEV 626
+ +V + + G H ++ +Y+WG N GQLG GD + P V
Sbjct: 198 TVLKVACGDEHV---VALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQTV 254
Query: 627 K 627
+
Sbjct: 255 E 255
Score = 64.1 bits (149), Expect = 4e-10
Identities = 43/167 (25%), Positives = 77/167 (46%), Gaps = 7/167 (4%)
Query: 446 IDDQWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPV 505
++D+ L+++ L RK+ S+ G H++ LT G +++ G +FG+LGTG+ +PV
Sbjct: 1 MEDKSPTLLISEDLSRKIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPV 60
Query: 506 RV-----ALHEPVR--ALAAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTL 558
V A + +R +AAG +H+LA++ G V+ WG + P
Sbjct: 61 LVEFPNQAEGDRIRIVGVAAGAYHSLAVSDDGSVWCWGYNIYGQLGFDGENSLAPCLIKN 120
Query: 559 PFHDDNDRYLAPSCVDTTNVRGRIVQISAGWHHSCIINNMGSIYTWG 605
F + ++ + AG S I+N+G ++ WG
Sbjct: 121 LFERETSSSSLNDSGREVGSDLKVCTVKAGSMMSLAIDNVGGLWMWG 167
Score = 60.9 bits (141), Expect = 4e-09
Identities = 60/229 (26%), Positives = 84/229 (36%), Gaps = 16/229 (6%)
Query: 293 CQDIHLEVTQPPSDTWKNQVFTPRRSLTCGLAHWAVVS--DGNARVMMASTPVNTELIG- 349
C D H+ P D K+ + + G H + DG +R + + G
Sbjct: 204 CGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQTVETFNQKSGL 263
Query: 350 RVIDVACGRHHTLILTENGLYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGA 409
V D+ACG HHT +LT G + L A
Sbjct: 264 TVYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSNKSSSLPEPVSDLPEHA 323
Query: 410 PLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGL--------GNIDDQWTPQLVT--KFL 459
LV V G +H++ V + G W WG+ LGL D P+ ++
Sbjct: 324 YLVSVDCGLFHTSVVSSEG--YVWSWGMERGLGLCPDVNFTEVEAGDDSVPRKISGGSSR 381
Query: 460 GRKVQSVGCGACHSVLLTRGG-ELWACGASVFGQLGTGQRGKASLPVRV 507
R V CGA H+VL+ GG +LW+ G G LGTG +P V
Sbjct: 382 FRDPVQVSCGAAHTVLVVDGGYKLWSWGRGRNGVLGTGNVSDCYVPTLV 430
Score = 52.4 bits (120), Expect = 1e-06
Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 23/181 (12%)
Query: 509 LHEPVRALAAGYFHNLALTHKGEVYVWGASP-QQVXXXXXXXXXEPSSPTLPFHDDNDRY 567
L + +LAAG H +ALT G VY WG ++ P P + DR
Sbjct: 14 LSRKIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRI 73
Query: 568 LAPSCVDTTNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVK 627
RIV ++AG +HS +++ GS++ WG N GQLG D + P +K
Sbjct: 74 -------------RIVGVAAGAYHSLAVSDDGSVWCWGYNIYGQLGF-DGENSLAPCLIK 119
Query: 628 --IRTETQPHTMKSDSEKTTDADENMEFNTKALVGCGGDFTVYIDDDGRIYSTGNTHLQI 685
ET ++ +DS + +D + V G ++ ID+ G ++ GN Q
Sbjct: 120 NLFERETSSSSL-NDSGREVGSDLKV-----CTVKAGSMMSLAIDNVGGLWMWGNVPPQD 173
Query: 686 S 686
S
Sbjct: 174 S 174
Score = 51.2 bits (117), Expect = 3e-06
Identities = 86/360 (23%), Positives = 133/360 (36%), Gaps = 54/360 (15%)
Query: 350 RVIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXX-------XXXXXXXXXXVL 401
R++ VA G +H+L ++++G ++ G N +GQL
Sbjct: 74 RIVGVAAGAYHSLAVSDDGSVWCWGYNIYGQLGFDGENSLAPCLIKNLFERETSSSSLND 133
Query: 402 RVRLAGGAPLVC-VAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWT----PQLVT 456
R G VC V AG S A+D G L WG V Q + +T P +
Sbjct: 134 SGREVGSDLKVCTVKAGSMMSLAIDNVGGLWMWG-NVPPQDSEPDPRLSFTSIPIPFPIL 192
Query: 457 KFLGRKVQSVGCGACHSVLLTRGGE-----------LWACGASVFGQLGTGQRGKASLPV 505
F GR V V CG H V L G+ L++ G + GQLG G + P
Sbjct: 193 DFHGRTVLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQ 252
Query: 506 RVALHE-----PVRALAAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPF 560
V V +A G H LT++ E +P+ E
Sbjct: 253 TVETFNQKSGLTVYDIACGAHHTALLTYRKE------TPKGPSICWTFGFGENGQLG--- 303
Query: 561 HDDNDRYLAPSCVDTTNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQI 620
H N P V +V + G H+ ++++ G +++WG+ + G G +
Sbjct: 304 HRSNKSSSLPEPVSDLPEHAYLVSVDCGLFHTSVVSSEGYVWSWGM----ERGLGLCPDV 359
Query: 621 QIPTEVKIRTETQPHTMKSDSEKTTDADENMEFNTKALVGCGGDFTVYIDDDG-RIYSTG 679
TEV+ ++ P + S + F V CG TV + D G +++S G
Sbjct: 360 NF-TEVEAGDDSVPRKISGGSSR---------FRDPVQVSCGAAHTVLVVDGGYKLWSWG 409
Score = 39.5 bits (88), Expect = 0.011
Identities = 15/65 (23%), Positives = 35/65 (53%)
Query: 569 APSCVDTTNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVKI 628
+P+ + + ++ +I+ ++AG H+ + G +Y+WG G+LG+G +P V+
Sbjct: 5 SPTLLISEDLSRKIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEF 64
Query: 629 RTETQ 633
+ +
Sbjct: 65 PNQAE 69
>At5g48330.1 68418.m05970 regulator of chromosome condensation
(RCC1) family protein contains Pfam PF00415:Regulator of
chromosome condensation (RCC1) domain (5 copies);
similar to UVB-resistance protein UVR8 (GI:5478530)
{Arabidopsis thaliana)
Length = 455
Score = 76.2 bits (179), Expect = 1e-13
Identities = 60/181 (33%), Positives = 83/181 (45%), Gaps = 19/181 (10%)
Query: 350 RVIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGG 408
+V D+ACG H+LIL +G L SAG N +GQL
Sbjct: 287 KVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLGMKPVDITE------------ 334
Query: 409 APLVCVAAGHYHSAAV-DAGGR-LLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSV 466
+P + +AAG HS A+ + G R +L+WGW QLG G ++ P+ V F G SV
Sbjct: 335 SP-ISIAAGLGHSLAICNRGERNILSWGWNRSRQLGRGKPEN--LPREVEGFDGESPASV 391
Query: 467 GCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVA-LHEPVRALAAGYFHNLA 525
G HS+ +T GE W G G+LG G P+ + + V AG+ H+L
Sbjct: 392 SAGRVHSLCVTEKGEAWVWGCGKNGRLGLGSSSDEPEPMLLEDVEGCVLQAVAGFDHSLI 451
Query: 526 L 526
L
Sbjct: 452 L 452
Score = 69.3 bits (162), Expect = 1e-11
Identities = 47/130 (36%), Positives = 63/130 (48%), Gaps = 7/130 (5%)
Query: 414 VAAGHYHSAAVDAGGRLLTWGWGVHGQLGL----GNIDDQWTPQLVTKFLGRKVQSVGCG 469
++AGHYHS AV + G + WG GQLG + D + P+ V VQ+
Sbjct: 87 ISAGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAAFAS 146
Query: 470 ACHSVLLTRGGELWACGASVFGQLGTGQR-GKASLPVRV--ALHEPVRALAAGYFHNLAL 526
S + G LW G S GQLG G +A +P RV E V ++ G+ H LAL
Sbjct: 147 GVVSAAIGDDGSLWVWGRSKRGQLGLGNGIIEARVPSRVENLAAEHVVKVSLGWGHALAL 206
Query: 527 THKGEVYVWG 536
T G+V+ WG
Sbjct: 207 TVDGKVFGWG 216
Score = 65.7 bits (153), Expect = 1e-10
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 23/168 (13%)
Query: 450 WTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVAL 509
W P LV + KV + CG+ HS++L G L + G++++GQLG ++ PV +
Sbjct: 275 WEPCLVEETCNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLGMKPVDIT- 333
Query: 510 HEPVRALAAGYFHNLALTHKGE--VYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRY 567
P+ ++AAG H+LA+ ++GE + WG + + +P + LP +
Sbjct: 334 ESPI-SIAAGLGHSLAICNRGERNILSWGWNRSR-----QLGRGKPEN--LPREVEGFDG 385
Query: 568 LAPSCVDTTNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSG 615
+P+ +SAG HS + G + WG +G+LG G
Sbjct: 386 ESPA------------SVSAGRVHSLCVTEKGEAWVWGCGKNGRLGLG 421
Score = 56.8 bits (131), Expect = 7e-08
Identities = 64/243 (26%), Positives = 102/243 (41%), Gaps = 39/243 (16%)
Query: 430 LLTWGWGVHGQLGLGNID------DQWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELW 483
++++G G G LGL + D + P +V+ L + S+ G HS+ +T GE+W
Sbjct: 46 VMSFGDGNLGALGLSSSSIPGMGMDAYEPTVVSN-LPSDISSISAGHYHSLAVTSSGEIW 104
Query: 484 ACGASVFGQLG----TGQRGKASLPVRVALHEPVR---ALAAGYFHNLALTHKGEVYVWG 536
A G + GQLG R S P RV E V A A+G + A+ G ++VWG
Sbjct: 105 AWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAAFASGVV-SAAIGDDGSLWVWG 163
Query: 537 ASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAGWHHSCIIN 596
S + L + PS V+ +V++S GW H+ +
Sbjct: 164 RSKR---------------GQLGLGNGIIEARVPSRVENLAAE-HVVKVSLGWGHALALT 207
Query: 597 NMGSIYTWGLNFDGQLGSGDRKQIQIPTEVKIRTETQPHTMKSDSEKTTDADENMEFNTK 656
G ++ WG DG++G+ + +P E + +MK D N+E K
Sbjct: 208 VDGKVFGWGYVADGRVGN-----VGLPLEASLLDSITDGSMKGHH---AAGDLNLEAAEK 259
Query: 657 ALV 659
+V
Sbjct: 260 KVV 262
Score = 54.4 bits (125), Expect = 4e-07
Identities = 67/287 (23%), Positives = 113/287 (39%), Gaps = 33/287 (11%)
Query: 343 VNTELIGRVIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVL 401
V + L + ++ G +H+L +T +G +++ G N GQL
Sbjct: 76 VVSNLPSDISSISAGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPK----- 130
Query: 402 RVRLAGGAPLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGN-IDDQWTPQLVTKFLG 460
RV + A SAA+ G L WG GQLGLGN I + P V
Sbjct: 131 RVEGLENVNVQAAFASGVVSAAIGDDGSLWVWGRSKRGQLGLGNGIIEARVPSRVENLAA 190
Query: 461 RKVQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHEPVRALAAGY 520
V V G H++ LT G+++ +G + G+ G LP+ +L + + +
Sbjct: 191 EHVVKVSLGWGHALALTVDGKVFG-----WGYVADGRVGNVGLPLEASLLDSITD-GSMK 244
Query: 521 FHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLA-PSCVDTTNVR 579
H+ A G++ + A + V +ND +A C+
Sbjct: 245 GHHAA----GDLNLEAAEKKVVEAMSK---------------ENDMPIAWEPCLVEETCN 285
Query: 580 GRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEV 626
++ I+ G HS I+ + G++ + G N GQLG + P ++
Sbjct: 286 EKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLGMKPVDI 332
Score = 53.6 bits (123), Expect = 6e-07
Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 6/125 (4%)
Query: 414 VAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACHS 473
+A G HS + G LL+ G ++GQLG D P +T+ S+ G HS
Sbjct: 291 IACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLGMKPVDITE----SPISIAAGLGHS 346
Query: 474 VLLTRGGE--LWACGASVFGQLGTGQRGKASLPVRVALHEPVRALAAGYFHNLALTHKGE 531
+ + GE + + G + QLG G+ V E +++AG H+L +T KGE
Sbjct: 347 LAICNRGERNILSWGWNRSRQLGRGKPENLPREVEGFDGESPASVSAGRVHSLCVTEKGE 406
Query: 532 VYVWG 536
+VWG
Sbjct: 407 AWVWG 411
Score = 40.7 bits (91), Expect = 0.005
Identities = 43/162 (26%), Positives = 70/162 (43%), Gaps = 19/162 (11%)
Query: 469 GACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVA-LHEPVRALAAGYFHNLALT 527
G +V+ G L A G S G G A P V+ L + +++AG++H+LA+T
Sbjct: 41 GERRTVMSFGDGNLGALGLSSSSIPGMGM--DAYEPTVVSNLPSDISSISAGHYHSLAVT 98
Query: 528 HKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVD-TTNVRGRIVQIS 586
GE++ WG + E + D P V+ NV +
Sbjct: 99 SSGEIWAWGRN------------DEGQLGRIVIDSSRDSRSEPKRVEGLENV--NVQAAF 144
Query: 587 AGWHHSCIINNMGSIYTWGLNFDGQLGSGDR-KQIQIPTEVK 627
A S I + GS++ WG + GQLG G+ + ++P+ V+
Sbjct: 145 ASGVVSAAIGDDGSLWVWGRSKRGQLGLGNGIIEARVPSRVE 186
Score = 32.3 bits (70), Expect = 1.6
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 583 VQISAGWHHSCIINNMG--SIYTWGLNFDGQLGSGDRKQIQIPTEVK 627
+ I+AG HS I N G +I +WG N QLG G K +P EV+
Sbjct: 337 ISIAAGLGHSLAICNRGERNILSWGWNRSRQLGRG--KPENLPREVE 381
>At1g19880.1 68414.m02493 regulator of chromosome condensation
(RCC1) family protein low similarity to UVB-resistance
protein UVR8 [Arabidopsis thaliana] GI:5478530; contains
Pfam profile PF00415: Regulator of chromosome
condensation (RCC1)
Length = 538
Score = 72.9 bits (171), Expect = 1e-12
Identities = 61/236 (25%), Positives = 102/236 (43%), Gaps = 10/236 (4%)
Query: 402 RVRLAGGAPLVCVAAG--HYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFL 459
R+R G + VA G +H A+D GR TWG GQLG G++ + P +V+
Sbjct: 49 RLRPLVGVNIRFVATGCASFHCVALDVEGRCYTWGRNEKGQLGHGDMIQRDRPTVVSGLS 108
Query: 460 GRKVQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHEPVRALAAG 519
K+ G H+V+++ G+ G + +GQLG G + V V P+ + +
Sbjct: 109 KHKIVKAAAGRNHTVVVSDDGQSLGFGWNKYGQLGLGSAKNGFVSVEVE-STPLPCVVSD 167
Query: 520 YFHNLALTHKGEVYV---WGASPQQVXXXXXXXXXEPSSPTLPFHDDNDR--YLA-PSCV 573
N+A V++ GAS + D + R Y A P
Sbjct: 168 EVTNVACGADFTVWLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPK 227
Query: 574 DTTNVRGR-IVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVKI 628
++ G IV+++ G +H+ ++ G +YTWG G+LG ++K P + +
Sbjct: 228 AIASLAGETIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRRIDV 283
Score = 60.9 bits (141), Expect = 4e-09
Identities = 46/168 (27%), Positives = 71/168 (42%), Gaps = 12/168 (7%)
Query: 331 DGNARVMMASTPVNTELIGRVIDVACGRHHTLILTEN---GLYSAGDNTFGQLXXXXXXX 387
+G V + STP+ + V +VACG T+ L+ + +AG +GQL
Sbjct: 149 NGFVSVEVESTPLPCVVSDEVTNVACGADFTVWLSSTEGASILTAGLPQYGQLGHGTDNE 208
Query: 388 XXXXXXXXXXXXVLRVR-----LAGGAPLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLG 442
+ R G +V VA G H+ AVD G + TWG+G +G+LG
Sbjct: 209 FNMKDSSVRLAYEAQPRPKAIASLAGETIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLG 268
Query: 443 LGNIDDQWTPQLVTKFLGRKV----QSVGCGACHSVLLTRGGELWACG 486
D+W P+ + F V + G+ +S GG+L+ G
Sbjct: 269 HREQKDEWAPRRIDVFQRNNVLPPNAILSAGSANSACTAGGGQLYMWG 316
Score = 52.4 bits (120), Expect = 1e-06
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 23/208 (11%)
Query: 350 RVIDVACGRHHTLILTENGL-YSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGG 408
+++ A GR+HT++++++G G N +GQL L ++
Sbjct: 111 KIVKAAAGRNHTVVVSDDGQSLGFGWNKYGQLGLGSAKNGFVSVEVESTP--LPCVVSDE 168
Query: 409 APLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLG-----NIDD---------QWTPQL 454
V A + G +LT G +GQLG G N+ D Q P+
Sbjct: 169 VTNVACGADFTVWLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKA 228
Query: 455 VTKFLGRKVQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHE--- 511
+ G + V CG H+V + + G ++ G +G+LG ++ P R+ + +
Sbjct: 229 IASLAGETIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRRIDVFQRNN 288
Query: 512 ---PVRALAAGYFHNLALTHKGEVYVWG 536
P L+AG ++ G++Y+WG
Sbjct: 289 VLPPNAILSAGSANSACTAGGGQLYMWG 316
Score = 45.2 bits (102), Expect = 2e-04
Identities = 64/268 (23%), Positives = 108/268 (40%), Gaps = 37/268 (13%)
Query: 425 DAGGRLLTWG---WGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSV--GCGACHSVLLTRG 479
+ GG LL G W + G+ + +P + +G ++ V GC + H V L
Sbjct: 17 EKGGELLFCGATAWDIIGKRKGAMEGNLVSPTRLRPLVGVNIRFVATGCASFHCVALDVE 76
Query: 480 GELWACGASVFGQLGTG---QRGKASLPVRVALHEPVRALAAGYFHNLALTHKGEV--YV 534
G + G + GQLG G QR + ++ ++ H+ V+A AAG H + ++ G+ +
Sbjct: 77 GRCYTWGRNEKGQLGHGDMIQRDRPTVVSGLSKHKIVKA-AAGRNHTVVVSDDGQSLGFG 135
Query: 535 WGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAGWHHSCI 594
W Q + P CV V + ++ G +
Sbjct: 136 WNKYGQLGLGSAKNGFVSVEVESTPL----------PCV----VSDEVTNVACGADFTVW 181
Query: 595 INNM--GSIYTWGLNFDGQLGSGDRKQIQI-PTEVKIRTETQPHTMKSDSEKTTDADENM 651
+++ SI T GL GQLG G + + + V++ E QP A ++
Sbjct: 182 LSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPR---------PKAIASL 232
Query: 652 EFNTKALVGCGGDFTVYIDDDGRIYSTG 679
T V CG + TV +D +G +Y+ G
Sbjct: 233 AGETIVKVACGTNHTVAVDKNGYVYTWG 260
Score = 36.3 bits (80), Expect = 0.10
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 424 VDAGGRLLTWGWGVHGQLGLGNIDDQWT--PQLVTKFLGRKVQSVGCGACHSVLL 476
V A ++WG +G+LG G + + P+ V G V V CG CHS+++
Sbjct: 351 VGADSSCISWGHAQYGELGYGPNGQKSSAAPKKVDMLEGMHVMGVACGFCHSMVI 405
>At3g26100.2 68416.m03250 regulator of chromosome condensation
(RCC1) family protein weak similarity to UVB-resistance
protein UVR8 [Arabidopsis thaliana] GI:5478530; contains
Pfam profile PF00415: Regulator of chromosome
condensation (RCC1)
Length = 532
Score = 67.7 bits (158), Expect = 4e-11
Identities = 68/242 (28%), Positives = 108/242 (44%), Gaps = 33/242 (13%)
Query: 400 VLRVRLAGGA----PLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLV 455
VLR LAG A AG HS AV + G + T+G+ GQLG G+ +D+ Q V
Sbjct: 130 VLRFLLAGEACCRREKSQAVAGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPV 189
Query: 456 TKFLGRKVQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQRG--KASLPVRVALHEPV 513
G ++ GA ++L++ G+++ACG FG+ G +G + P V + +
Sbjct: 190 RSLQGVRIIQAAAGAARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNI 249
Query: 514 RAL--AAGYFHNLALTHKGEVYV--WGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLA 569
+ A G + L+ +G+VY WG + ++ EP
Sbjct: 250 FVVQAAIGNYFTAVLSREGKVYTFSWG-NDGRLGHQTEAADVEP---------------R 293
Query: 570 PSCVDTTNVRGRIVQISAGWHH----SCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTE 625
P NV +VQI+AG+ + +C N M S+Y+ G G+LG G R + P
Sbjct: 294 PLLGPLENV--PVVQIAAGYCYLLALACQPNGM-SVYSVGCGLGGKLGHGSRTDEKYPRV 350
Query: 626 VK 627
++
Sbjct: 351 IE 352
Score = 60.1 bits (139), Expect = 7e-09
Identities = 63/238 (26%), Positives = 113/238 (47%), Gaps = 30/238 (12%)
Query: 410 PLVCVAAGHYHSAAVDA---GGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKF--LGRKVQ 464
P+V +AAG+ + A+ G + + G G+ G+LG G+ D+ P+++ +F L + +
Sbjct: 303 PVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPR 362
Query: 465 SVGCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHEPVRAL--AAGYFH 522
V GA H+ ++ + G + G +G LG G S+P V V+A+ A G +
Sbjct: 363 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHVKAVHVATGDYT 422
Query: 523 NLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRY---LAPSCVDTTN-V 578
++ G+VY +G PS F + +R+ L+P+ V + V
Sbjct: 423 TFVVSDDGDVYSFGCGES------ASLGHHPS-----FDEQGNRHANVLSPTVVTSLKQV 471
Query: 579 RGRIVQISAG----WH-HSCIINNMGSIYTWGLNFDGQLGS---GDRKQIQIPTEVKI 628
R+VQIS W+ H+ + G ++ +G GQLG+ ++K+ +P +V I
Sbjct: 472 NERMVQISLTNSIYWNAHTFALTESGKLFAFGAGDQGQLGTELGKNQKERCVPEKVDI 529
Score = 54.0 bits (124), Expect = 5e-07
Identities = 47/196 (23%), Positives = 81/196 (41%), Gaps = 16/196 (8%)
Query: 350 RVIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGG 408
R+I A G T++++++G +Y+ G +FG+ V
Sbjct: 196 RIIQAAAGAARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQL-------VTSLKN 248
Query: 409 APLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQ-LVTKFLGRKVQSVG 467
+V A G+Y +A + G++ T+ WG G+LG P+ L+ V +
Sbjct: 249 IFVVQAAIGNYFTAVLSREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIA 308
Query: 468 CGACHSVLLT---RGGELWACGASVFGQLGTGQRGKASLPVRV----ALHEPVRALAAGY 520
G C+ + L G +++ G + G+LG G R P + L+ R +AAG
Sbjct: 309 AGYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGA 368
Query: 521 FHNLALTHKGEVYVWG 536
+H + G V WG
Sbjct: 369 WHAAVVGQDGRVCTWG 384
Score = 46.4 bits (105), Expect = 9e-05
Identities = 67/278 (24%), Positives = 109/278 (39%), Gaps = 29/278 (10%)
Query: 357 GRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGAPLVCVA 415
G H++ +T G +Y+ G N GQL + VR G ++ A
Sbjct: 151 GPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEAR---------IQPVRSLQGVRIIQAA 201
Query: 416 AGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQ--WTPQLVTKFLGRKVQSVGCGACHS 473
AG + + G++ G G+ G + TPQLVT V G +
Sbjct: 202 AGAARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFT 261
Query: 474 VLLTRGGELWACGASVFGQLGTGQRGKASLPVRVAL----HEPVRALAAGYFHNLALTHK 529
+L+R G+++ G+LG Q A + R L + PV +AAGY + LAL +
Sbjct: 262 AVLSREGKVYTFSWGNDGRLG-HQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALACQ 320
Query: 530 GEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAGW 589
G S V S + +++ N++ R+V +AG
Sbjct: 321 PN----GMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQF------QILNLQPRVV--AAGA 368
Query: 590 HHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVK 627
H+ ++ G + TWG G LG G+ + +P V+
Sbjct: 369 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVE 406
>At3g26100.1 68416.m03251 regulator of chromosome condensation
(RCC1) family protein weak similarity to UVB-resistance
protein UVR8 [Arabidopsis thaliana] GI:5478530; contains
Pfam profile PF00415: Regulator of chromosome
condensation (RCC1)
Length = 432
Score = 67.7 bits (158), Expect = 4e-11
Identities = 68/242 (28%), Positives = 108/242 (44%), Gaps = 33/242 (13%)
Query: 400 VLRVRLAGGA----PLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLV 455
VLR LAG A AG HS AV + G + T+G+ GQLG G+ +D+ Q V
Sbjct: 30 VLRFLLAGEACCRREKSQAVAGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPV 89
Query: 456 TKFLGRKVQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQRG--KASLPVRVALHEPV 513
G ++ GA ++L++ G+++ACG FG+ G +G + P V + +
Sbjct: 90 RSLQGVRIIQAAAGAARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNI 149
Query: 514 RAL--AAGYFHNLALTHKGEVYV--WGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLA 569
+ A G + L+ +G+VY WG + ++ EP
Sbjct: 150 FVVQAAIGNYFTAVLSREGKVYTFSWG-NDGRLGHQTEAADVEP---------------R 193
Query: 570 PSCVDTTNVRGRIVQISAGWHH----SCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTE 625
P NV +VQI+AG+ + +C N M S+Y+ G G+LG G R + P
Sbjct: 194 PLLGPLENV--PVVQIAAGYCYLLALACQPNGM-SVYSVGCGLGGKLGHGSRTDEKYPRV 250
Query: 626 VK 627
++
Sbjct: 251 IE 252
Score = 60.1 bits (139), Expect = 7e-09
Identities = 63/238 (26%), Positives = 113/238 (47%), Gaps = 30/238 (12%)
Query: 410 PLVCVAAGHYHSAAVDA---GGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKF--LGRKVQ 464
P+V +AAG+ + A+ G + + G G+ G+LG G+ D+ P+++ +F L + +
Sbjct: 203 PVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPR 262
Query: 465 SVGCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHEPVRAL--AAGYFH 522
V GA H+ ++ + G + G +G LG G S+P V V+A+ A G +
Sbjct: 263 VVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHVKAVHVATGDYT 322
Query: 523 NLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRY---LAPSCVDTTN-V 578
++ G+VY +G PS F + +R+ L+P+ V + V
Sbjct: 323 TFVVSDDGDVYSFGCGES------ASLGHHPS-----FDEQGNRHANVLSPTVVTSLKQV 371
Query: 579 RGRIVQISAG----WH-HSCIINNMGSIYTWGLNFDGQLGS---GDRKQIQIPTEVKI 628
R+VQIS W+ H+ + G ++ +G GQLG+ ++K+ +P +V I
Sbjct: 372 NERMVQISLTNSIYWNAHTFALTESGKLFAFGAGDQGQLGTELGKNQKERCVPEKVDI 429
Score = 54.0 bits (124), Expect = 5e-07
Identities = 47/196 (23%), Positives = 81/196 (41%), Gaps = 16/196 (8%)
Query: 350 RVIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGG 408
R+I A G T++++++G +Y+ G +FG+ V
Sbjct: 96 RIIQAAAGAARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQL-------VTSLKN 148
Query: 409 APLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQ-LVTKFLGRKVQSVG 467
+V A G+Y +A + G++ T+ WG G+LG P+ L+ V +
Sbjct: 149 IFVVQAAIGNYFTAVLSREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIA 208
Query: 468 CGACHSVLLT---RGGELWACGASVFGQLGTGQRGKASLPVRV----ALHEPVRALAAGY 520
G C+ + L G +++ G + G+LG G R P + L+ R +AAG
Sbjct: 209 AGYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGA 268
Query: 521 FHNLALTHKGEVYVWG 536
+H + G V WG
Sbjct: 269 WHAAVVGQDGRVCTWG 284
Score = 46.4 bits (105), Expect = 9e-05
Identities = 67/278 (24%), Positives = 109/278 (39%), Gaps = 29/278 (10%)
Query: 357 GRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGAPLVCVA 415
G H++ +T G +Y+ G N GQL + VR G ++ A
Sbjct: 51 GPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEAR---------IQPVRSLQGVRIIQAA 101
Query: 416 AGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQ--WTPQLVTKFLGRKVQSVGCGACHS 473
AG + + G++ G G+ G + TPQLVT V G +
Sbjct: 102 AGAARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFT 161
Query: 474 VLLTRGGELWACGASVFGQLGTGQRGKASLPVRVAL----HEPVRALAAGYFHNLALTHK 529
+L+R G+++ G+LG Q A + R L + PV +AAGY + LAL +
Sbjct: 162 AVLSREGKVYTFSWGNDGRLG-HQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALACQ 220
Query: 530 GEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAGW 589
G S V S + +++ N++ R+V +AG
Sbjct: 221 PN----GMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQF------QILNLQPRVV--AAGA 268
Query: 590 HHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVK 627
H+ ++ G + TWG G LG G+ + +P V+
Sbjct: 269 WHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVE 306
>At1g54360.2 68414.m06198 expressed protein
Length = 447
Score = 33.1 bits (72), Expect = 0.94
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 702 TKRVIKIPASRTNHKFLFQPVAAVDMLSSANDLQR-QPIVSQLNPLQSMKDFKRKSWADD 760
T + K+ +SR K L+Q + + S + QP + Q +PLQ++ D KR + DD
Sbjct: 33 TSSMTKMSSSRMLSKLLYQMHLLMHLFSHWLAIDGIQPSIPQNSPLQAISDLKRSEYKDD 92
>At1g54360.1 68414.m06197 expressed protein
Length = 447
Score = 33.1 bits (72), Expect = 0.94
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 702 TKRVIKIPASRTNHKFLFQPVAAVDMLSSANDLQR-QPIVSQLNPLQSMKDFKRKSWADD 760
T + K+ +SR K L+Q + + S + QP + Q +PLQ++ D KR + DD
Sbjct: 33 TSSMTKMSSSRMLSKLLYQMHLLMHLFSHWLAIDGIQPSIPQNSPLQAISDLKRSEYKDD 92
>At2g16940.1 68415.m01952 RNA recognition motif (RRM)-containing
protein
Length = 561
Score = 31.1 bits (67), Expect = 3.8
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 643 KTTDADENMEFNTKALVGCGGDFTVYIDDDGRIYSTGNTHLQISNEKTKGGNRVIMMKTT 702
K ++A++N+ +T A G GG Y R+Y GN H+ +S + + +V +
Sbjct: 255 KPSEAEKNLVQSTTAAAGAGGMLGPYSGGARRLY-VGNLHINMSEDDLR---KVFESFGS 310
Query: 703 KRVIKIPASRT 713
++++P T
Sbjct: 311 VELVQVPRDET 321
>At5g43450.1 68418.m05312 2-oxoglutarate-dependent dioxygenase,
putative similar to 2A6 (GI:599622) and tomato ethylene
synthesis regulatory protein E8 (SP|P10967)
Length = 362
Score = 30.3 bits (65), Expect = 6.7
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 797 LMLENLKRGPQNDCFYVQHSTPLEIEHSADCEAGP-PTRKDEVKITITNVIAKRIKDVSL 855
L +N KR N+ F + HS+PL S C P P +E+ + + + + K V
Sbjct: 125 LPTDNNKRFVYNNDFDLYHSSPLNWRDSFTCYIAPDPPNPEEIPLACRSAVIEYTKHVME 184
Query: 856 --AILNDVAYNV--IDPSTFKSLPC 876
A+L + +D T K + C
Sbjct: 185 LGAVLFQLLSEALGLDSETLKRIDC 209
>At3g55950.1 68416.m06217 protein kinase family protein contains
protein kinase domain, Pfam:PF00069; similar to
cytokinin-regulated kinase 1 [Nicotiana tabacum]
gi|10998537|gb|AAG25966
Length = 814
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 582 IVQISAGWHHSCIINNMGSIYTWGLNFDGQL 612
+V ISAG H+C +N G++ G N GQL
Sbjct: 201 MVTISAGKSHACGLNTTGNLICIGNNDSGQL 231
>At2g01150.1 68415.m00024 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 147
Score = 29.9 bits (64), Expect = 8.8
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Query: 777 NLNMAAKFAYHNNAYSECLRLMLENLKRGPQ---NDCFYVQHSTPLE 820
NLN + Y +NA S+C+ + L LK G + DC +V H LE
Sbjct: 57 NLNRLFSYRYSDNAASDCI-VCLSKLKTGEEVRKLDCRHVFHKQCLE 102
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.321 0.135 0.421
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,838,711
Number of Sequences: 28952
Number of extensions: 936949
Number of successful extensions: 2446
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1811
Number of HSP's gapped (non-prelim): 421
length of query: 993
length of database: 12,070,560
effective HSP length: 88
effective length of query: 905
effective length of database: 9,522,784
effective search space: 8618119520
effective search space used: 8618119520
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 64 (29.9 bits)
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