Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000415-TA|BGIBMGA000415-PA|IPR009091|Regulator of
chromosome condensation/beta-lactamase-inhibitor protein II,
IPR000408|Regulator of chromosome condensation, RCC1
(993 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7970| Best HMM Match : RCC1 (HMM E-Value=0) 137 5e-32
SB_6739| Best HMM Match : RCC1 (HMM E-Value=1.6e-34) 93 8e-19
SB_17592| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 1e-18
SB_45009| Best HMM Match : RCC1 (HMM E-Value=7.6e-21) 89 2e-17
SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 3e-14
SB_5067| Best HMM Match : RCC1 (HMM E-Value=4.5e-16) 76 1e-13
SB_17186| Best HMM Match : RCC1 (HMM E-Value=1.5e-19) 73 1e-12
SB_18907| Best HMM Match : RCC1 (HMM E-Value=0) 72 2e-12
SB_25012| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 5e-12
SB_32347| Best HMM Match : RCC1 (HMM E-Value=0.00072) 71 6e-12
SB_59432| Best HMM Match : MORN (HMM E-Value=9.3e-26) 63 9e-10
SB_31780| Best HMM Match : Pkinase (HMM E-Value=0) 59 2e-08
SB_46796| Best HMM Match : RCC1 (HMM E-Value=3e-14) 59 2e-08
SB_55819| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 3e-08
SB_20583| Best HMM Match : RCC1 (HMM E-Value=6.2e-08) 53 1e-06
SB_30518| Best HMM Match : FYVE (HMM E-Value=1.2e-18) 46 1e-04
SB_2363| Best HMM Match : RCC1 (HMM E-Value=0.00041) 46 1e-04
SB_29134| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-04
SB_23006| Best HMM Match : RCC1 (HMM E-Value=0.014) 37 0.092
SB_30631| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 2.0
SB_15184| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.5
SB_18199| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.5
SB_17488| Best HMM Match : Phi-29_GP3 (HMM E-Value=0.69) 31 3.5
SB_2820| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 6.1
>SB_7970| Best HMM Match : RCC1 (HMM E-Value=0)
Length = 651
Score = 137 bits (331), Expect = 5e-32
Identities = 96/312 (30%), Positives = 151/312 (48%), Gaps = 28/312 (8%)
Query: 319 LTCGLAHWAVVSDGNARVMMASTPVNTELIGRVIDVACGRHHTLILTENG-LYSAGDNTF 377
++ G H + G+ + + V RV+ V+ G H++ ++ +G ++S GD F
Sbjct: 306 MSWGHGHRGKLGHGDEQNQLLPNKVEALAGRRVVAVSAGSDHSIAISADGAVWSWGDGDF 365
Query: 378 GQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGAPLVCVAAGHYHSAAVDAGGRLLTWGWGV 437
G+L + G +V V+AG YHS A+ A G + +WG+G
Sbjct: 366 GKLGHGDEQNQLLPT---------KKEAFAGQRVVAVSAGEYHSLAIIADGAVWSWGFGY 416
Query: 438 HGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQ 497
HGQLG G+ Q P+ + F G +V +V GA HS+ +T G LW+ G G+LG G
Sbjct: 417 HGQLGHGDQQIQLLPKQIEAFAGLRVVAVSAGAAHSLAITADGALWSWGYGDSGRLGHGD 476
Query: 498 RGKASLPVRV-ALHEP-VRALAAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSS 555
LP +V A P V A++AG H+LALT G V+ WG +S
Sbjct: 477 EQDQLLPKKVEAFVGPHVVAVSAGAAHSLALTADGSVWSWGWG---------------AS 521
Query: 556 PTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSG 615
L D+ ++ L P ++ R+V +SAG HS + G++++WG GQLG G
Sbjct: 522 GRLGHGDEQNQLLLPKKIEAF-AGQRVVAVSAGLRHSGALTADGALWSWGEGAYGQLGHG 580
Query: 616 DRKQIQIPTEVK 627
D ++ +P +V+
Sbjct: 581 DEQRQLLPKKVE 592
Score = 123 bits (296), Expect = 8e-28
Identities = 104/355 (29%), Positives = 157/355 (44%), Gaps = 36/355 (10%)
Query: 281 VNVACAVEAR-EPCQDIHLEVTQPPSDTWKNQVFTPRRSLTCGLAHWAVVSDGNAR-VMM 338
V V C V R +P + + P + R LT LA + S G V
Sbjct: 5 VAVLCGVAVRVQPAGEGSSRLLSQPLHRRRGAALVVR--LTGDLALLSRDSSGTXEGVTR 62
Query: 339 ASTPVN--TELIG-RVIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXX 394
+TP + L G R + ++ G H L LT +G ++S G G+L
Sbjct: 63 LNTPTRLPSPLGGERAVSMSAGAAHCLALTADGAVWSWGHGGQGRLGHGDAQHQLLPK-- 120
Query: 395 XXXXXVLRVRLAGGAPLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQL 454
+V G +V V+AG++HS A+ A GR+ +WG+G G+LG GN Q P+
Sbjct: 121 -------KVEAFAGQRVVAVSAGYFHSLALTADGRVWSWGYGRDGRLGHGNTQHQLLPKK 173
Query: 455 VTKFLGRKVQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVA--LHEP 512
+ G++V +V G HS+ +T G +W+ G G+LG G+ LP ++ +
Sbjct: 174 LEGLAGQRVVAVSAGIAHSLAITADGSVWSWGWGGHGRLGHGEEKTQLLPKKIEAFADQR 233
Query: 513 VRALAAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSC 572
V A++AG H+LALT G V+ WG H D L P
Sbjct: 234 VVAVSAGSGHSLALTADGAVFTWGFGAHGRLG----------------HGDEQHQLLPKK 277
Query: 573 VDTTNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVK 627
++ V R V +SAG HS I G++ +WG G+LG GD + +P +V+
Sbjct: 278 IEAF-VGQRAVAVSAGPRHSLAITADGAVMSWGHGHRGKLGHGDEQNQLLPNKVE 331
Score = 122 bits (293), Expect = 2e-27
Identities = 92/284 (32%), Positives = 140/284 (49%), Gaps = 31/284 (10%)
Query: 350 RVIDVACGRHHTL-ILTENGLYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGG 408
RV+ V+ G +H+L I+ + ++S G GQL ++ G
Sbjct: 389 RVVAVSAGEYHSLAIIADGAVWSWGFGYHGQLGHGDQQIQLLPK---------QIEAFAG 439
Query: 409 APLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGC 468
+V V+AG HS A+ A G L +WG+G G+LG G+ DQ P+ V F+G V +V
Sbjct: 440 LRVVAVSAGAAHSLAITADGALWSWGYGDSGRLGHGDEQDQLLPKKVEAFVGPHVVAVSA 499
Query: 469 GACHSVLLTRGGELWACGASVFGQLGTG-QRGKASLPVRVALH--EPVRALAAGYFHNLA 525
GA HS+ LT G +W+ G G+LG G ++ + LP ++ + V A++AG H+ A
Sbjct: 500 GAAHSLALTADGSVWSWGWGASGRLGHGDEQNQLLLPKKIEAFAGQRVVAVSAGLRHSGA 559
Query: 526 LTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQI 585
LT G ++ WG E + L H D R L P V+ + R+V +
Sbjct: 560 LTADGALWSWG---------------EGAYGQLG-HGDEQRQLLPKKVEAFAGQ-RVVAV 602
Query: 586 SAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQ-IPTEVKI 628
SAG +HS I+ G+ TWG DG LG G+ Q +P +V++
Sbjct: 603 SAGAYHSLAISADGAFLTWGQGEDGCLGHGEDLSDQLLPKKVEV 646
Score = 115 bits (276), Expect = 2e-25
Identities = 82/281 (29%), Positives = 130/281 (46%), Gaps = 29/281 (10%)
Query: 350 RVIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGG 408
RV+ V+ G H+L LT +G +++ G G+L ++ G
Sbjct: 233 RVVAVSAGSGHSLALTADGAVFTWGFGAHGRLGHGDEQHQLLPK---------KIEAFVG 283
Query: 409 APLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGC 468
V V+AG HS A+ A G +++WG G G+LG G+ +Q P V GR+V +V
Sbjct: 284 QRAVAVSAGPRHSLAITADGAVMSWGHGHRGKLGHGDEQNQLLPNKVEALAGRRVVAVSA 343
Query: 469 GACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVR--VALHEPVRALAAGYFHNLAL 526
G+ HS+ ++ G +W+ G FG+LG G LP + + V A++AG +H+LA+
Sbjct: 344 GSDHSIAISADGAVWSWGDGDFGKLGHGDEQNQLLPTKKEAFAGQRVVAVSAGEYHSLAI 403
Query: 527 THKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQIS 586
G V+ WG H D L P ++ R+V +S
Sbjct: 404 IADGAVWSWGFGYHGQLG----------------HGDQQIQLLPKQIEAF-AGLRVVAVS 446
Query: 587 AGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVK 627
AG HS I G++++WG G+LG GD + +P +V+
Sbjct: 447 AGAAHSLAITADGALWSWGYGDSGRLGHGDEQDQLLPKKVE 487
Score = 103 bits (246), Expect = 9e-22
Identities = 67/219 (30%), Positives = 106/219 (48%), Gaps = 13/219 (5%)
Query: 322 GLAHWAVVSDGNARVMMASTPVNTELIGRVIDVACGRHHTLILTENG-LYSAGDNTFGQL 380
G + + G+ ++ + + RV+ V+ G H+L +T +G L+S G G+L
Sbjct: 413 GFGYHGQLGHGDQQIQLLPKQIEAFAGLRVVAVSAGAAHSLAITADGALWSWGYGDSGRL 472
Query: 381 XXXXXXXXXXXXXXXXXXXVLRVRLAGGAPLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQ 440
+V G +V V+AG HS A+ A G + +WGWG G+
Sbjct: 473 GHGDEQDQLLPK---------KVEAFVGPHVVAVSAGAAHSLALTADGSVWSWGWGASGR 523
Query: 441 LGLGNIDDQWT-PQLVTKFLGRKVQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQRG 499
LG G+ +Q P+ + F G++V +V G HS LT G LW+ G +GQLG G
Sbjct: 524 LGHGDEQNQLLLPKKIEAFAGQRVVAVSAGLRHSGALTADGALWSWGEGAYGQLGHGDEQ 583
Query: 500 KASLPVRVALH--EPVRALAAGYFHNLALTHKGEVYVWG 536
+ LP +V + V A++AG +H+LA++ G WG
Sbjct: 584 RQLLPKKVEAFAGQRVVAVSAGAYHSLAISADGAFLTWG 622
Score = 71.7 bits (168), Expect = 3e-12
Identities = 52/164 (31%), Positives = 77/164 (46%), Gaps = 10/164 (6%)
Query: 351 VIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGA 409
V+ V+ G H+L LT +G ++S G G+L ++ G
Sbjct: 494 VVAVSAGAAHSLALTADGSVWSWGWGASGRLGHGDEQNQLLLPK--------KIEAFAGQ 545
Query: 410 PLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCG 469
+V V+AG HS A+ A G L +WG G +GQLG G+ Q P+ V F G++V +V G
Sbjct: 546 RVVAVSAGLRHSGALTADGALWSWGEGAYGQLGHGDEQRQLLPKKVEAFAGQRVVAVSAG 605
Query: 470 ACHSVLLTRGGELWACGASVFGQLGTGQ-RGKASLPVRVALHEP 512
A HS+ ++ G G G LG G+ LP +V + P
Sbjct: 606 AYHSLAISADGAFLTWGQGEDGCLGHGEDLSDQLLPKKVEVWAP 649
>SB_6739| Best HMM Match : RCC1 (HMM E-Value=1.6e-34)
Length = 1790
Score = 93.5 bits (222), Expect = 8e-19
Identities = 66/223 (29%), Positives = 98/223 (43%), Gaps = 21/223 (9%)
Query: 408 GAPLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVG 467
G ++ ++ G HSAAV + G L TWG G +G+LG G+ +DQ P LV+ G + V
Sbjct: 594 GKQVIRISCGSTHSAAVTSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVA 653
Query: 468 CGA--CHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHE--PVRALAAGYFHN 523
CG+ H++ G +W+ G +G+LG G P + + V + G +
Sbjct: 654 CGSGDAHTLAAADDGTVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFS 713
Query: 524 LALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIV 583
LALT G V+ WG H D P V+ + + +V
Sbjct: 714 LALTRDGSVWTWGKGEGFRLG----------------HGTEDHVRHPKLVEALDGK-HVV 756
Query: 584 QISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEV 626
+S G H + + G +Y WG N GQLG D + PT V
Sbjct: 757 DVSVGSIHCLALTDAGEVYCWGRNDQGQLGDIDCQIRPEPTLV 799
Score = 73.7 bits (173), Expect = 7e-13
Identities = 57/212 (26%), Positives = 88/212 (41%), Gaps = 21/212 (9%)
Query: 420 HSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACHSVLLTRG 479
H A+ G + +WG G G+LG G+ + P LVT G++V + CG+ HS +T
Sbjct: 554 HFLALTREGEVYSWGSGDGGKLGHGDTSPREEPTLVTGLAGKQVIRISCGSTHSAAVTSE 613
Query: 480 GELWACGASVFGQLGTGQRGKASLPVRVA----LHEPVRALAAGYFHNLALTHKGEVYVW 535
GEL+ G +G+LG G +PV V+ H A +G H LA G V+ W
Sbjct: 614 GELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSGDAHTLAAADDGTVWSW 673
Query: 536 GASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAGWHHSCII 595
G +D P ++ G + ++ G S +
Sbjct: 674 GDGDYGKLG----------------RGGSDGCKNPKSIERLQGLG-VCKVYCGAQFSLAL 716
Query: 596 NNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVK 627
GS++TWG +LG G ++ P V+
Sbjct: 717 TRDGSVWTWGKGEGFRLGHGTEDHVRHPKLVE 748
Score = 51.2 bits (117), Expect = 4e-06
Identities = 52/191 (27%), Positives = 76/191 (39%), Gaps = 28/191 (14%)
Query: 439 GQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQR 498
G L GN P + + VQ + C V+LTR G+++ S GQ
Sbjct: 476 GWLNWGNTGHTAGPITLADLVELGVQQISCAERSLVVLTRAGKVYMQAYSHEGQPPAELE 535
Query: 499 --GKASLPVRVALHEPVRALAAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSP 556
+ V+V H + H LALT +GEVY WG+
Sbjct: 536 CLSRKCEIVQVVTHTDGK-------HFLALTREGEVYSWGSGDGGKLG------------ 576
Query: 557 TLPFHDDNDRYLAPSCVDTTNVRGR-IVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSG 615
H D P+ V T + G+ +++IS G HS + + G +YTWG G+LG G
Sbjct: 577 ----HGDTSPREEPTLV--TGLAGKQVIRISCGSTHSAAVTSEGELYTWGRGNYGRLGHG 630
Query: 616 DRKQIQIPTEV 626
+ +P V
Sbjct: 631 SSEDQLVPVLV 641
Score = 39.5 bits (88), Expect = 0.013
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 403 VRLAGGAPLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQ--LVTKFLG 460
V G +V V+ G H A+ G + WG GQ LG+ID Q P+ LV+
Sbjct: 747 VEALDGKHVVDVSVGSIHCLALTDAGEVYCWGRNDQGQ--LGDIDCQIRPEPTLVSGLAS 804
Query: 461 RKVQSVGCGACHSVLLTRGGELWACG 486
+ + + CG S + G+ W+ G
Sbjct: 805 KGIVGIACGPAQSFAWSCAGQ-WSVG 829
>SB_17592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3592
Score = 93.1 bits (221), Expect = 1e-18
Identities = 63/220 (28%), Positives = 98/220 (44%), Gaps = 21/220 (9%)
Query: 408 GAPLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVG 467
G ++ ++ G HSA + L TWG G +G+LG G+ +DQ P++V G +V V
Sbjct: 2518 GKGVIDISCGGSHSACITQNHELYTWGKGRYGRLGHGDSEDQLLPKVVEALRGNRVIDVA 2577
Query: 468 CGA--CHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRV--ALHEPVRALAAGYFHN 523
CG+ ++ LT +W+ G +G+LG G +P++V + V + G +
Sbjct: 2578 CGSGDAQTLCLTDDDCVWSWGDGDYGKLGRGGSDGCKIPMKVESLIGLGVSKVECGSQFS 2637
Query: 524 LALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIV 583
+ALT G VY WG H +D P V + +++
Sbjct: 2638 VALTRSGAVYTWGKGDYYRLG----------------HGVDDHVRRPKRVAALQGK-KVI 2680
Query: 584 QISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIP 623
I+ G H + G +YTWG N +GQLG G I P
Sbjct: 2681 TIATGSLHCVASTDTGEVYTWGDNDEGQLGDGTTNAIARP 2720
Score = 85.0 bits (201), Expect = 3e-16
Identities = 61/206 (29%), Positives = 94/206 (45%), Gaps = 23/206 (11%)
Query: 414 VAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGA--C 471
++ G HSAA+ + G L TWG G +G+LG G+ P+ V F +V + CG+
Sbjct: 1579 MSCGSSHSAAILSSGELYTWGLGEYGRLGHGDNYTHLKPKKVQSFTSHRVIDIACGSRDA 1638
Query: 472 HSVLLTRGGELWACGASVFGQLGTGQRGKASL--PVRVALHEPVRALAAGYFHNLALTHK 529
++ LT G +W+ G FG+LG G S+ PV + V +A G +LAL+
Sbjct: 1639 QTLALTDDGTVWSWGDGDFGKLGRGGSEGCSVPNPVEKLQGQGVCKVACGAQFSLALSTS 1698
Query: 530 GEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRG-RIVQISAG 588
G V+ WG H ++ P VD +RG +IV ++ G
Sbjct: 1699 GLVWTWGKGDYYRLG----------------HGNDTHVRKPQIVD--GLRGKKIVDVAVG 1740
Query: 589 WHHSCIINNMGSIYTWGLNFDGQLGS 614
H + + G ++ WG N GQ G+
Sbjct: 1741 ALHCLAVTDSGQVFAWGDNDHGQQGN 1766
Score = 79.0 bits (186), Expect = 2e-14
Identities = 57/189 (30%), Positives = 82/189 (43%), Gaps = 10/189 (5%)
Query: 351 VIDVACGRHHTLILTEN-GLYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGA 409
VID++CG H+ +T+N LY+ G +G+L V+
Sbjct: 2521 VIDISCGGSHSACITQNHELYTWGKGRYGRL-------GHGDSEDQLLPKVVEALRGNRV 2573
Query: 410 PLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCG 469
V +G + + + +WG G +G+LG G D P V +G V V CG
Sbjct: 2574 IDVACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRGGSDGCKIPMKVESLIGLGVSKVECG 2633
Query: 470 ACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVAL--HEPVRALAAGYFHNLALT 527
+ SV LTR G ++ G + +LG G P RVA + V +A G H +A T
Sbjct: 2634 SQFSVALTRSGAVYTWGKGDYYRLGHGVDDHVRRPKRVAALQGKKVITIATGSLHCVAST 2693
Query: 528 HKGEVYVWG 536
GEVY WG
Sbjct: 2694 DTGEVYTWG 2702
Score = 75.8 bits (178), Expect = 2e-13
Identities = 75/299 (25%), Positives = 122/299 (40%), Gaps = 30/299 (10%)
Query: 332 GNARVMMASTPVNTELIG--RVIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXX 388
G + PV +E IG +V +A G ++ +G +++ G++T G+L
Sbjct: 1448 GGLKGSKIKVPVLSEFIGALKVQQIAGGSKTLFAVSHDGKVFACGESTNGRLGLGPLSAN 1507
Query: 389 XXXXXXXXXXXVLRVRLAGGAPLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDD 448
VR V V +G H+ A+ G+L +WG G G+LG GN +
Sbjct: 1508 VTVPRQIENLSSFMVRK------VSVHSGGRHAMALTIEGKLFSWGEGEDGKLGHGNRMN 1561
Query: 449 QWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVA 508
P+L+ F V+ + CG+ HS + GEL+ G +G+LG G P +V
Sbjct: 1562 CDHPKLIDTFKSSCVRDMSCGSSHSAAILSSGELYTWGLGEYGRLGHGDNYTHLKPKKVQ 1621
Query: 509 LHEPVRA--LAAGY--FHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDN 564
R +A G LALT G V+ WG E S
Sbjct: 1622 SFTSHRVIDIACGSRDAQTLALTDDGTVWSWGDGD---FGKLGRGGSEGCS--------- 1669
Query: 565 DRYLAPSCVDTTNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIP 623
P+ V+ +G + +++ G S ++ G ++TWG +LG G+ ++ P
Sbjct: 1670 ----VPNPVEKLQGQG-VCKVACGAQFSLALSTSGLVWTWGKGDYYRLGHGNDTHVRKP 1723
Score = 72.9 bits (171), Expect = 1e-12
Identities = 61/211 (28%), Positives = 91/211 (43%), Gaps = 14/211 (6%)
Query: 320 TCGLAHWAVVSDGNARVMMASTPVNTELIGRVIDVACGRH--HTLILTENG-LYSAGDNT 376
T GL + + G+ + V + RVID+ACG TL LT++G ++S GD
Sbjct: 1597 TWGLGEYGRLGHGDNYTHLKPKKVQSFTSHRVIDIACGSRDAQTLALTDDGTVWSWGDGD 1656
Query: 377 FGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGAPLVCVAAGHYHSAAVDAGGRLLTWGWG 436
FG+L V G + VA G S A+ G + TWG G
Sbjct: 1657 FGKLGRGGSEGCSVPNP---------VEKLQGQGVCKVACGAQFSLALSTSGLVWTWGKG 1707
Query: 437 VHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELWACGASVFGQLGTG 496
+ +LG GN PQ+V G+K+ V GA H + +T G+++A G + GQ G
Sbjct: 1708 DYYRLGHGNDTHVRKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWGDNDHGQQGNN 1767
Query: 497 QRGKASLP--VRVALHEPVRALAAGYFHNLA 525
P V + + +A G H++A
Sbjct: 1768 TTTVNRRPQLVNGLEGQKITRVACGSSHSIA 1798
Score = 68.9 bits (161), Expect = 2e-11
Identities = 58/219 (26%), Positives = 89/219 (40%), Gaps = 21/219 (9%)
Query: 412 VCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGAC 471
V V +G H+ A+ A G + +WG G G+LG GN + P+++ G+ V + CG
Sbjct: 2470 VAVHSGGKHAMALSADGDVYSWGEGDDGKLGHGNRNSCDRPRVIEALRGKGVIDISCGGS 2529
Query: 472 HSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHEPVR----ALAAGYFHNLALT 527
HS +T+ EL+ G +G+LG G LP V R A +G L LT
Sbjct: 2530 HSACITQNHELYTWGKGRYGRLGHGDSEDQLLPKVVEALRGNRVIDVACGSGDAQTLCLT 2589
Query: 528 HKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISA 587
V+ WG +D P V++ G + ++
Sbjct: 2590 DDDCVWSWGDGDYGKLG----------------RGGSDGCKIPMKVESLIGLG-VSKVEC 2632
Query: 588 GWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEV 626
G S + G++YTWG +LG G ++ P V
Sbjct: 2633 GSQFSVALTRSGAVYTWGKGDYYRLGHGVDDHVRRPKRV 2671
Score = 68.5 bits (160), Expect = 2e-11
Identities = 60/222 (27%), Positives = 99/222 (44%), Gaps = 26/222 (11%)
Query: 414 VAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWT-PQLV---TKFLGRKVQSVGCG 469
+A G AV G++ G +G+LGLG + T P+ + + F+ RKV SV G
Sbjct: 1472 IAGGSKTLFAVSHDGKVFACGESTNGRLGLGPLSANVTVPRQIENLSSFMVRKV-SVHSG 1530
Query: 470 ACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHEP--VRALAAGYFHNLALT 527
H++ LT G+L++ G G+LG G R P + + VR ++ G H+ A+
Sbjct: 1531 GRHAMALTIEGKLFSWGEGEDGKLGHGNRMNCDHPKLIDTFKSSCVRDMSCGSSHSAAIL 1590
Query: 528 HKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISA 587
GE+Y WG H DN +L P V + R++ I+
Sbjct: 1591 SSGELYTWGLGEYGRLG----------------HGDNYTHLKPKKVQSFTSH-RVIDIAC 1633
Query: 588 GWH--HSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVK 627
G + + + G++++WG G+LG G + +P V+
Sbjct: 1634 GSRDAQTLALTDDGTVWSWGDGDFGKLGRGGSEGCSVPNPVE 1675
Score = 67.7 bits (158), Expect = 4e-11
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 14/211 (6%)
Query: 320 TCGLAHWAVVSDGNARVMMASTPVNTELIGRVIDVACGRH--HTLILTENG-LYSAGDNT 376
T G + + G++ + V RVIDVACG TL LT++ ++S GD
Sbjct: 2542 TWGKGRYGRLGHGDSEDQLLPKVVEALRGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGD 2601
Query: 377 FGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGAPLVCVAAGHYHSAAVDAGGRLLTWGWG 436
+G+L ++V G + V G S A+ G + TWG G
Sbjct: 2602 YGKLGRGGSDGCKIP---------MKVESLIGLGVSKVECGSQFSVALTRSGAVYTWGKG 2652
Query: 437 VHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELWACGASVFGQLGTG 496
+ +LG G D P+ V G+KV ++ G+ H V T GE++ G + GQLG G
Sbjct: 2653 DYYRLGHGVDDHVRRPKRVAALQGKKVITIATGSLHCVASTDTGEVYTWGDNDEGQLGDG 2712
Query: 497 QRGKASLP--VRVALHEPVRALAAGYFHNLA 525
+ P V + + +A G H +A
Sbjct: 2713 TTNAIARPRLVTALQGKKISRVACGSAHTIA 2743
Score = 59.7 bits (138), Expect = 1e-08
Identities = 55/224 (24%), Positives = 100/224 (44%), Gaps = 27/224 (12%)
Query: 412 VCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKF---LGRKVQSVGC 468
V + G AV A G++ G+G G+LGLG D + +++ + RKV +V
Sbjct: 2416 VQIVGGEQTLFAVTAEGKVYATGYGHGGRLGLGGTDTVTSIKMLESLQHVVVRKV-AVHS 2474
Query: 469 GACHSVLLTRGGELWACGASVFGQLGTGQRGKASLP--VRVALHEPVRALAAGYFHNLAL 526
G H++ L+ G++++ G G+LG G R P + + V ++ G H+ +
Sbjct: 2475 GGKHAMALSADGDVYSWGEGDDGKLGHGNRNSCDRPRVIEALRGKGVIDISCGGSHSACI 2534
Query: 527 THKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRG-RIVQI 585
T E+Y WG H D++ L P V+ +RG R++ +
Sbjct: 2535 TQNHELYTWGKGRYGRLG----------------HGDSEDQLLPKVVEA--LRGNRVIDV 2576
Query: 586 S--AGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVK 627
+ +G + + + +++WG G+LG G +IP +V+
Sbjct: 2577 ACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRGGSDGCKIPMKVE 2620
Score = 58.4 bits (135), Expect = 3e-08
Identities = 55/207 (26%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 428 GRLLTWGWGVHGQLGLGNID-DQWTPQLVTKFLGR-KVQSVGCGACHSVLLTRGGELWAC 485
G++ + WG++ + LG + + ++++F+G KVQ + G+ ++ G+++AC
Sbjct: 1432 GQIKVFVWGLNDKDQLGGLKGSKIKVPVLSEFIGALKVQQIAGGSKTLFAVSHDGKVFAC 1491
Query: 486 GASVFGQLGTGQ-RGKASLPVRVALHEP--VRALA--AGYFHNLALTHKGEVYVWGASPQ 540
G S G+LG G ++P ++ VR ++ +G H +ALT +G+++ WG
Sbjct: 1492 GESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVSVHSGGRHAMALTIEGKLFSWG---- 1547
Query: 541 QVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAGWHHSCIINNMGS 600
E L H + P +DT + +S G HS I + G
Sbjct: 1548 -----------EGEDGKLG-HGNRMNCDHPKLIDTFK-SSCVRDMSCGSSHSAAILSSGE 1594
Query: 601 IYTWGLNFDGQLGSGDRKQIQIPTEVK 627
+YTWGL G+LG GD P +V+
Sbjct: 1595 LYTWGLGEYGRLGHGDNYTHLKPKKVQ 1621
Score = 35.9 bits (79), Expect = 0.16
Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 581 RIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVKIRTETQPHTMKSD 640
R V + +G H+ + G +++WG DG+LG G+R P + T KS
Sbjct: 1523 RKVSVHSGGRHAMALTIEGKLFSWGEGEDGKLGHGNRMNCDHPKLI--------DTFKSS 1574
Query: 641 SEKTTDADENMEFNTKALVGCGGDFTVYIDDDGRI-YSTGNTHLQISNEKTKGGNRVI 697
+ + ++ A++ G +T + + GR+ + THL+ ++ +RVI
Sbjct: 1575 CVRDMSCGSS---HSAAILSSGELYTWGLGEYGRLGHGDNYTHLKPKKVQSFTSHRVI 1629
Score = 33.5 bits (73), Expect = 0.86
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 599 GSIYTWGLNFDGQLGSGDRKQIQIPTEVKIRTETQP 634
G+IY WG N GQLGS + ++++P ++ +P
Sbjct: 2380 GTIYGWGHNHRGQLGSLEGAKVKLPQTIEALASIRP 2415
>SB_45009| Best HMM Match : RCC1 (HMM E-Value=7.6e-21)
Length = 595
Score = 88.6 bits (210), Expect = 2e-17
Identities = 77/300 (25%), Positives = 122/300 (40%), Gaps = 15/300 (5%)
Query: 342 PVNTELIGRVIDVACGRHHTLILT-ENGLYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXV 400
P+ T + ++ +V+ G+ H ++T E Y+ GDN+ GQL
Sbjct: 77 PIETPVRAQLGEVSVGQSHVAVVTLERAAYTWGDNSRGQLGQGDLVNRDKPTL------- 129
Query: 401 LRVRLAGGAPLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLG 460
V G + G +S V G ++T G G LG G+ P+L+ L
Sbjct: 130 --VDTLKGKAITRACCGDKYSVFVTDNGIVMTCGSSDTGCLGHGDWSSTPRPKLIEGLLS 187
Query: 461 RKVQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHE---PVRALA 517
V +V CG H ++ G ++ G G+LG G +P +V + + +R +
Sbjct: 188 VDVTAVSCGPHHVAVVCSEGLVFTWGKGADGRLGLGNEDDQCVPCQVTMEDANVSIRDVR 247
Query: 518 AGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTN 577
G + LT G + G++ L D P+ V +
Sbjct: 248 CGLDGTMFLTDTGALLACGSNANNKLGLNNRQGFLMQMKNLLNKDPVKVTTTPTAVKALS 307
Query: 578 VRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVKIRTETQPHTM 637
R R+V ++ G HS ++ G ++T G N DGQLGSG+ K P VK + E Q TM
Sbjct: 308 -RYRVVDMALGPTHSAVLVEPGHVHTLGSNQDGQLGSGNTKPRDAPASVK-QLEDQTVTM 365
Score = 44.4 bits (100), Expect = 5e-04
Identities = 54/232 (23%), Positives = 83/232 (35%), Gaps = 11/232 (4%)
Query: 319 LTCGLAHWAVVSDGNARVMMASTPVNTELIGRVIDVACGRHHTLILTENGL-YSAGDNTF 377
+TCG + + G+ + L V V+CG HH ++ GL ++ G
Sbjct: 158 MTCGSSDTGCLGHGDWSSTPRPKLIEGLLSVDVTAVSCGPHHVAVVCSEGLVFTWGKGAD 217
Query: 378 GQLXXXXXXXXXX---XXXXXXXXXVLRVRLAGGAPLVCVAAGHYHSAAVDAGGRL-LTW 433
G+L + VR + G + +A +L L
Sbjct: 218 GRLGLGNEDDQCVPCQVTMEDANVSIRDVRCGLDGTMFLTDTGALLACGSNANNKLGLNN 277
Query: 434 GWGVHGQL-GLGNIDD---QWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELWACGASV 489
G Q+ L N D TP V +V + G HS +L G + G++
Sbjct: 278 RQGFLMQMKNLLNKDPVKVTTTPTAVKALSRYRVVDMALGPTHSAVLVEPGHVHTLGSNQ 337
Query: 490 FGQLGTGQRGKASLPVRVALHEP--VRALAAGYFHNLALTHKGEVYVWGASP 539
GQLG+G P V E V + GY +A T+ +Y WG+ P
Sbjct: 338 DGQLGSGNTKPRDAPASVKQLEDQTVTMVFCGYGFTVAGTNDNTLYFWGSRP 389
>SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 950
Score = 78.2 bits (184), Expect = 3e-14
Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Query: 411 LVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGA 470
+V ++ G HSA V G L ++G G GQLG G+ +D P+++ +K + + CG+
Sbjct: 37 VVNLSCGDEHSAVVTESGHLYSFGCGGDGQLGHGDAEDSHVPKIIEGLDVQKYKHLACGS 96
Query: 471 CHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHEPVRALAAGYFHNLALT 527
S +T GEL+ G+ GQ G G+ +P R+ LH VR ++ GY+H +T
Sbjct: 97 DFSAAITENGELYTWGSCGEGQNGLGE--DTEIPTRLHLHGKVRMVSCGYYHMAVVT 151
Score = 56.4 bits (130), Expect = 1e-07
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 11/139 (7%)
Query: 350 RVIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGG 408
+V+ ACG T ++T+NG +Y+ G GQL ++ R
Sbjct: 370 QVVVAACGAEFTAVVTKNGSVYTFGQGNQGQLGLGSSMMETEFPERIPLFEKVKART--- 426
Query: 409 APLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGN--IDDQWTPQLVTKFLGRKVQSV 466
V+ G +A + G L T+G G HG+LGLG+ + + P+ V +F V+ V
Sbjct: 427 -----VSCGESFTAVITKHGNLYTFGDGRHGKLGLGDECFSNTFKPEKVKRFNNFTVKMV 481
Query: 467 GCGACHSVLLTRGGELWAC 485
CG CH ++ + C
Sbjct: 482 TCGGCHMLVAAERKDEGVC 500
Score = 51.6 bits (118), Expect = 3e-06
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 411 LVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGN-IDDQWTPQLVTKFLGRKVQSVGCG 469
+V A G +A V G + T+G G GQLGLG+ + + P+ + F K ++V CG
Sbjct: 371 VVVAACGAEFTAVVTKNGSVYTFGQGNQGQLGLGSSMMETEFPERIPLFEKVKARTVSCG 430
Query: 470 ACHSVLLTRGGELWACGASVFGQLGTG 496
+ ++T+ G L+ G G+LG G
Sbjct: 431 ESFTAVITKHGNLYTFGDGRHGKLGLG 457
Score = 47.6 bits (108), Expect = 5e-05
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 449 QWTPQLVTKFLGRK--VQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVR 506
++ L KF R V ++ CG HS ++T G L++ G GQLG G + +P
Sbjct: 21 RFADNLANKFWIRDDAVVNLSCGDEHSAVVTESGHLYSFGCGGDGQLGHGDAEDSHVPKI 80
Query: 507 V-ALH-EPVRALAAGYFHNLALTHKGEVYVWGA 537
+ L + + LA G + A+T GE+Y WG+
Sbjct: 81 IEGLDVQKYKHLACGSDFSAAITENGELYTWGS 113
Score = 45.6 bits (103), Expect = 2e-04
Identities = 40/128 (31%), Positives = 55/128 (42%), Gaps = 14/128 (10%)
Query: 351 VIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGA 409
V++++CG H+ ++TE+G LYS G GQL LA G+
Sbjct: 37 VVNLSCGDEHSAVVTESGHLYSFGCGGDGQLGHGDAEDSHVPKIIEGLDVQKYKHLACGS 96
Query: 410 PLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCG 469
SAA+ G L TWG GQ GLG +D P + L KV+ V CG
Sbjct: 97 DF---------SAAITENGELYTWGSCGEGQNGLG--EDTEIPTRL--HLHGKVRMVSCG 143
Query: 470 ACHSVLLT 477
H ++T
Sbjct: 144 YYHMAVVT 151
Score = 44.0 bits (99), Expect = 6e-04
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 4/113 (3%)
Query: 428 GRLLTWGWGVHGQLGLGNIDDQWTPQLVT-KFLGRKVQSVGCGACHSVLLTRGGELWACG 486
G L G G+LGL + T QL K + +V CGA + ++T+ G ++ G
Sbjct: 335 GSLYMCGEKEGGKLGLDHEQLDNTSQLQKIKSIEDQVVVAACGAEFTAVVTKNGSVYTFG 394
Query: 487 ASVFGQLGTG-QRGKASLPVRVALHEPVRA--LAAGYFHNLALTHKGEVYVWG 536
GQLG G + P R+ L E V+A ++ G +T G +Y +G
Sbjct: 395 QGNQGQLGLGSSMMETEFPERIPLFEKVKARTVSCGESFTAVITKHGNLYTFG 447
Score = 43.6 bits (98), Expect = 8e-04
Identities = 23/81 (28%), Positives = 38/81 (46%)
Query: 582 IVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVKIRTETQPHTMKSDS 641
+V +S G HS ++ G +Y++G DGQLG GD + +P ++ + + S
Sbjct: 37 VVNLSCGDEHSAVVTESGHLYSFGCGGDGQLGHGDAEDSHVPKIIEGLDVQKYKHLACGS 96
Query: 642 EKTTDADENMEFNTKALVGCG 662
+ + EN E T G G
Sbjct: 97 DFSAAITENGELYTWGSCGEG 117
Score = 33.9 bits (74), Expect = 0.65
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 561 HDDNDRYLAPSCVDTTNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQI 620
H D + P ++ +V+ + ++ G S I G +YTWG +GQ G G+
Sbjct: 69 HGDAEDSHVPKIIEGLDVQ-KYKHLACGSDFSAAITENGELYTWGSCGEGQNGLGE--DT 125
Query: 621 QIPTEVKI 628
+IPT + +
Sbjct: 126 EIPTRLHL 133
Score = 32.7 bits (71), Expect = 1.5
Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 577 NVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSG-DRKQIQIPTEVKIRTETQPH 635
++ ++V + G + ++ GS+YT+G GQLG G + + P + + + +
Sbjct: 366 SIEDQVVVAACGAEFTAVVTKNGSVYTFGQGNQGQLGLGSSMMETEFPERIPLFEKVKAR 425
Query: 636 TM 637
T+
Sbjct: 426 TV 427
>SB_5067| Best HMM Match : RCC1 (HMM E-Value=4.5e-16)
Length = 390
Score = 76.2 bits (179), Expect = 1e-13
Identities = 67/230 (29%), Positives = 98/230 (42%), Gaps = 17/230 (7%)
Query: 319 LTCGLAHWAVVSDGNAR-VMMASTPVNTELIGR---VIDVACGRHHTLILTENG-LYSAG 373
+T G +A G+ V ++S N L+G+ V +ACG HTL++T +G L+S G
Sbjct: 88 ITWGCGEFAQHGHGHCNDVPISSGLFNPLLVGQDGQVTHIACGSSHTLVITGDGRLFSWG 147
Query: 374 DNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGAPLVCVAAGHYHSAAVDAGGRLLTW 433
+ GQL ++ + + G + VA G HS G ++
Sbjct: 148 NGNSGQLGIGSTNTTLQPH-------LVPLGVTPGTRIEGVACGTRHSFVWTEEGECFSF 200
Query: 434 GWGVHGQLGLGNI-----DDQWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELWACGAS 488
G QLG D+Q P V RKV V CG+ HS+ L G + A G +
Sbjct: 201 GNNYSAQLGYDFRKPDFKDNQLKPIYVDTLFNRKVLQVACGSRHSLFLFSNGHVAAVGCN 260
Query: 489 VFGQLGTGQRGKASLPVRVALHEPVRALAAGYFHNLALTHKGEVYVWGAS 538
GQ+G G + V V +A G H LA +G+V+ WG S
Sbjct: 261 NRGQIGIGNKTDTFCIQNVPDLTGVTVVACGNSHCLAADVQGQVWAWGYS 310
Score = 66.5 bits (155), Expect = 1e-10
Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 24/200 (12%)
Query: 428 GRLLTWGWGVHGQLGLGNIDD------QWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGE 481
G L+TWG G Q G G+ +D + P LV + +V + CG+ H++++T G
Sbjct: 85 GFLITWGCGEFAQHGHGHCNDVPISSGLFNPLLVGQ--DGQVTHIACGSSHTLVITGDGR 142
Query: 482 LWACGASVFGQLGTGQRGKA----SLPVRVALHEPVRALAAGYFHNLALTHKGEVYVWGA 537
L++ G GQLG G +P+ V + +A G H+ T +GE + +G
Sbjct: 143 LFSWGNGNSGQLGIGSTNTTLQPHLVPLGVTPGTRIEGVACGTRHSFVWTEEGECFSFG- 201
Query: 538 SPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAGWHHSCIINN 597
+P D D L P VDT R +++Q++ G HS + +
Sbjct: 202 --NNYSAQLGYDFRKP--------DFKDNQLKPIYVDTLFNR-KVLQVACGSRHSLFLFS 250
Query: 598 MGSIYTWGLNFDGQLGSGDR 617
G + G N GQ+G G++
Sbjct: 251 NGHVAAVGCNNRGQIGIGNK 270
Score = 59.7 bits (138), Expect = 1e-08
Identities = 53/190 (27%), Positives = 77/190 (40%), Gaps = 13/190 (6%)
Query: 350 RVIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGG 408
R+ VACG H+ + TE G +S G+N QL + V
Sbjct: 177 RIEGVACGTRHSFVWTEEGECFSFGNNYSAQLGYDFRKPDFKDNQLKP----IYVDTLFN 232
Query: 409 APLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGC 468
++ VA G HS + + G + G GQ+G+GN D + Q V G V V C
Sbjct: 233 RKVLQVACGSRHSLFLFSNGHVAAVGCNNRGQIGIGNKTDTFCIQNVPDLTG--VTVVAC 290
Query: 469 GACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRV--ALHEPVRALAAGYFHNLAL 526
G H + G++WA G S G R P + + V+AL+ G H++ L
Sbjct: 291 GNSHCLAADVQGQVWAWGYSK----ACGAREDLLSPENIFTSTDSCVKALSGGDSHSMIL 346
Query: 527 THKGEVYVWG 536
H G + G
Sbjct: 347 LHNGRLLTVG 356
>SB_17186| Best HMM Match : RCC1 (HMM E-Value=1.5e-19)
Length = 637
Score = 72.9 bits (171), Expect = 1e-12
Identities = 66/221 (29%), Positives = 90/221 (40%), Gaps = 44/221 (19%)
Query: 420 HSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQS-VGCGACHSVLLTR 478
H+ A+ G++ +WG G +G+LG GN Q P+LV LG KV + G HS +T
Sbjct: 396 HTLALTLDGKVYSWGDGDYGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAAVTE 455
Query: 479 GGELWACGASVFGQLGT-----------GQRGKASLPVRV-----------ALHEPV-RA 515
GEL+ G +G+LG+ G ++PV+V AL V R
Sbjct: 456 DGELYTWGEGDYGRLGSCHSIARPVSGHGDNNSRNVPVQVKDVANVGQVIEALQGMVIRK 515
Query: 516 LAAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSP-TLPFHDDNDRYLAPSCVD 574
+ G +LALT G+VYVWG P P L H
Sbjct: 516 VCCGSQCSLALTSTGQVYVWGCGPSLGTGSVDATSATPKLLLALQSHS------------ 563
Query: 575 TTNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSG 615
+V IS G H + ++Y WG N GQ G G
Sbjct: 564 -------VVDISVGDSHCVALTQDNNVYAWGNNSMGQCGQG 597
Score = 67.3 bits (157), Expect = 6e-11
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 20/216 (9%)
Query: 414 VAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVT---KFLGRKVQSVGCGA 470
+ AG Y + + G + G G +G+LGLG+ +Q + + + L + V S
Sbjct: 335 IEAGQYCTFVIFPDGFVHACGKGSYGRLGLGDSTNQTQLKRLNFDNECLVKSVSSSKGSD 394
Query: 471 CHSVLLTRGGELWACGASVFGQLGTGQRGKASLP--VRVAL-HEPVRALAAGYFHNLALT 527
H++ LT G++++ G +G+LG G +P V AL ++ V +AAGY H+ A+T
Sbjct: 395 GHTLALTLDGKVYSWGDGDYGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAAVT 454
Query: 528 HKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNV-------RG 580
GE+Y WG + + P D+N R + D NV +G
Sbjct: 455 EDGELYTWG----EGDYGRLGSCHSIARPVSGHGDNNSRNVPVQVKDVANVGQVIEALQG 510
Query: 581 RIV-QISAGWHHSCIINNMGSIYTWGLNFDGQLGSG 615
++ ++ G S + + G +Y WG LG+G
Sbjct: 511 MVIRKVCCGSQCSLALTSTGQVYVWGCG--PSLGTG 544
Score = 65.7 bits (153), Expect = 2e-10
Identities = 62/204 (30%), Positives = 87/204 (42%), Gaps = 39/204 (19%)
Query: 360 HTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGAPLVCVAAGH 418
HTL LT +G +YS GD +G+L G + C+AAG+
Sbjct: 396 HTLALTLDGKVYSWGDGDYGKLGHGNSQTQKIPKLVEGAL--------GNKVVCCIAAGY 447
Query: 419 YHSAAVDAGGRLLTWGWGVHGQLGL-----------GNIDDQWTP----------QLVTK 457
HSAAV G L TWG G +G+LG G+ + + P Q++
Sbjct: 448 RHSAAVTEDGELYTWGEGDYGRLGSCHSIARPVSGHGDNNSRNVPVQVKDVANVGQVIEA 507
Query: 458 FLGRKVQSVGCGACHSVLLTRGGEL--WACGASVFGQLGTGQRGKASLPVRVAL---HEP 512
G ++ V CG+ S+ LT G++ W CG S LGTG S ++ L
Sbjct: 508 LQGMVIRKVCCGSQCSLALTSTGQVYVWGCGPS----LGTGSVDATSATPKLLLALQSHS 563
Query: 513 VRALAAGYFHNLALTHKGEVYVWG 536
V ++ G H +ALT VY WG
Sbjct: 564 VVDISVGDSHCVALTQDNNVYAWG 587
Score = 50.0 bits (114), Expect = 9e-06
Identities = 54/224 (24%), Positives = 91/224 (40%), Gaps = 20/224 (8%)
Query: 322 GLAHWAVVSDGNARVMMASTPVNTELIGRVID-VACGRHHTLILTENG-LYSAGDNTFGQ 379
G + + GN++ V L +V+ +A G H+ +TE+G LY+ G+ +G+
Sbjct: 410 GDGDYGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAAVTEDGELYTWGEGDYGR 469
Query: 380 LXXXXXXXXXXXXXXXXXXXVLRVRLAG------------GAPLVCVAAGHYHSAAVDAG 427
L + V++ G + V G S A+ +
Sbjct: 470 LGSCHSIARPVSGHGDNNSRNVPVQVKDVANVGQVIEALQGMVIRKVCCGSQCSLALTST 529
Query: 428 GRLLTWGWGVHGQLGLGNID-DQWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELWACG 486
G++ WG G LG G++D TP+L+ V + G H V LT+ ++A G
Sbjct: 530 GQVYVWGCGP--SLGTGSVDATSATPKLLLALQSHSVVDISVGDSHCVALTQDNNVYAWG 587
Query: 487 ASVFGQLGTGQ-RGKASLPVRVALHE--PVRALAAGYFHNLALT 527
+ GQ G G + P +V + V ++AG H +A T
Sbjct: 588 NNSMGQCGQGHCTTPITKPKKVLGLDGVAVHQISAGTSHTVAWT 631
Score = 45.2 bits (102), Expect = 3e-04
Identities = 48/205 (23%), Positives = 75/205 (36%), Gaps = 22/205 (10%)
Query: 480 GELWACGASVFGQLGTGQRGKASLPVRV-----ALHEPVRALAAGYFHNLALTHKGEVYV 534
G + ACG +G+LG G + R+ L + V + H LALT G+VY
Sbjct: 349 GFVHACGKGSYGRLGLGDSTNQTQLKRLNFDNECLVKSVSSSKGSDGHTLALTLDGKVYS 408
Query: 535 WGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAGWHHSCI 594
WG H ++ P V+ + I+AG+ HS
Sbjct: 409 WGDGDYGKLG----------------HGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAA 452
Query: 595 INNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVKIRTETQPHTMKSDSEKTTDADENMEFN 654
+ G +YTWG G+LGS + + P +K D E ++
Sbjct: 453 VTEDGELYTWGEGDYGRLGSCHSIARPVSGHGDNNSRNVPVQVK-DVANVGQVIEALQGM 511
Query: 655 TKALVGCGGDFTVYIDDDGRIYSTG 679
V CG ++ + G++Y G
Sbjct: 512 VIRKVCCGSQCSLALTSTGQVYVWG 536
>SB_18907| Best HMM Match : RCC1 (HMM E-Value=0)
Length = 444
Score = 72.1 bits (169), Expect = 2e-12
Identities = 70/281 (24%), Positives = 117/281 (41%), Gaps = 32/281 (11%)
Query: 408 GAPLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLG---LGNIDDQWTPQLVTKFLGRKVQ 464
G P+V V +G H+ A+ G++ TWG G LG ++++ P +V+ +
Sbjct: 82 GVPIVQVESGGMHTVALSKDGKVYTWGCNDDGALGRETTSEGEEEFQPGVVSMPDDVNIV 141
Query: 465 SVGCGACHSVLLTRGGELWACGA--SVFGQLGTGQRGKASLPVRVALHEPVR--ALAAGY 520
V G H+ L+ G ++A G GQ+G G P + E R +A+G
Sbjct: 142 MVSAGDSHTAALSDQGTVYAWGTYRDASGQIGLQPDGVKKKPAVILTSESDRIIKIASGN 201
Query: 521 FHNLALTHKGEVYVWGASPQ-QVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVR 579
H ALT G ++ G + Q Q+ L + L P+ V +
Sbjct: 202 DHTAALTTSGNLFTLGCAEQGQLGRVKECFSARGGRRGLAY------ILEPALVRSKKGL 255
Query: 580 GRIVQISAGWHHSCIINNMGS-IYTWGLNFDGQLGSGDRKQIQIPTEVKIRTETQPHTMK 638
+ + G + ++ GS +Y WGLN GQLG+GD + P +VK ++ K
Sbjct: 256 -KFKDVFCGSFATFVVAKTGSDVYAWGLNNYGQLGTGDVQTWHFPVKVKSLSQLN----K 310
Query: 639 SDSEKTTDADENMEFNTKALVGCGGDFTVYIDDDGRIYSTG 679
S+ +K + G T+ D +G++Y+ G
Sbjct: 311 SEKDK------------HITIANGQHHTIVCDPNGKVYALG 339
Score = 64.1 bits (149), Expect = 5e-10
Identities = 54/201 (26%), Positives = 88/201 (43%), Gaps = 15/201 (7%)
Query: 350 RVIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXV--LRVRLA 406
R+I +A G HT LT +G L++ G GQL + VR
Sbjct: 193 RIIKIASGNDHTAALTTSGNLFTLGCAEQGQLGRVKECFSARGGRRGLAYILEPALVRSK 252
Query: 407 GGAPLVCVAAGHYHSAAV-DAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQS 465
G V G + + V G + WG +GQLG G++ W + K L + +S
Sbjct: 253 KGLKFKDVFCGSFATFVVAKTGSDVYAWGLNNYGQLGTGDVQT-WHFPVKVKSLSQLNKS 311
Query: 466 -------VGCGACHSVLLTRGGELWACGASVFGQLGTGQRGK-ASLPVRVAL--HEPVRA 515
+ G H+++ G+++A G + +G+LG G K +LP + +E +
Sbjct: 312 EKDKHITIANGQHHTIVCDPNGKVYALGRADYGRLGLGDGAKETALPAHITSLDNEVIEK 371
Query: 516 LAAGYFHNLALTHKGEVYVWG 536
+A G + A++ KGE+Y WG
Sbjct: 372 VACGECVSFAVSDKGELYSWG 392
Score = 60.9 bits (141), Expect = 5e-09
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 21/192 (10%)
Query: 428 GRLLTWGWGVHGQLGLG-NIDDQWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELWACG 486
G+ LT G G GQLGLG + ++ P + G + V G H+V L++ G+++ G
Sbjct: 49 GQALTLGQGDVGQLGLGPDTLERKKPAVPIDLEGVPIVQVESGGMHTVALSKDGKVYTWG 108
Query: 487 ASVFGQLG--TGQRGKASL-PVRVALHEPVR--ALAAGYFHNLALTHKGEVYVWGASPQQ 541
+ G LG T G+ P V++ + V ++AG H AL+ +G VY WG
Sbjct: 109 CNDDGALGRETTSEGEEEFQPGVVSMPDDVNIVMVSAGDSHTAALSDQGTVYAWG----- 163
Query: 542 VXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAGWHHSCIINNMGSI 601
+S + D + V T+ RI++I++G H+ + G++
Sbjct: 164 --------TYRDASGQIGLQPDGVK--KKPAVILTSESDRIIKIASGNDHTAALTTSGNL 213
Query: 602 YTWGLNFDGQLG 613
+T G GQLG
Sbjct: 214 FTLGCAEQGQLG 225
Score = 56.0 bits (129), Expect = 1e-07
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 6/147 (4%)
Query: 353 DVACGRHHTLILTENG--LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGAP 410
DV CG T ++ + G +Y+ G N +GQL ++ +
Sbjct: 259 DVFCGSFATFVVAKTGSDVYAWGLNNYGQLGTGDVQTWHFPVKVKSLS---QLNKSEKDK 315
Query: 411 LVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGN-IDDQWTPQLVTKFLGRKVQSVGCG 469
+ +A G +H+ D G++ G +G+LGLG+ + P +T ++ V CG
Sbjct: 316 HITIANGQHHTIVCDPNGKVYALGRADYGRLGLGDGAKETALPAHITSLDNEVIEKVACG 375
Query: 470 ACHSVLLTRGGELWACGASVFGQLGTG 496
C S ++ GEL++ G QLG G
Sbjct: 376 ECVSFAVSDKGELYSWGMGSCLQLGNG 402
Score = 55.6 bits (128), Expect = 2e-07
Identities = 71/305 (23%), Positives = 122/305 (40%), Gaps = 36/305 (11%)
Query: 340 STPVNTELIGRVIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXX 398
+ P++ E + ++ V G HT+ L+++G +Y+ G N G L
Sbjct: 75 AVPIDLEGVP-IVQVESGGMHTVALSKDGKVYTWGCNDDGALGRETTSEGEEEFQPGV-- 131
Query: 399 XVLRVRLAGGAPLVCVAAGHYHSAAVDAGGRLLTWGW--GVHGQLGLGNIDDQWTPQLVT 456
V + +V V+AG H+AA+ G + WG GQ+GL + P ++
Sbjct: 132 ----VSMPDDVNIVMVSAGDSHTAALSDQGTVYAWGTYRDASGQIGLQPDGVKKKPAVIL 187
Query: 457 KFLGRKVQSVGCGACHSVLLTRGGELWACGASVFGQLGT---------GQRGKASL--PV 505
++ + G H+ LT G L+ G + GQLG G+RG A + P
Sbjct: 188 TSESDRIIKIASGNDHTAALTTSGNLFTLGCAEQGQLGRVKECFSARGGRRGLAYILEPA 247
Query: 506 RVALHEPVRA--LAAGYFHNLALTHKG-EVYVWGASPQQVXXXXXXXXXEPSSPTLPFHD 562
V + ++ + G F + G +VY WG + + + P
Sbjct: 248 LVRSKKGLKFKDVFCGSFATFVVAKTGSDVYAWGLN-----NYGQLGTGDVQTWHFPVKV 302
Query: 563 DNDRYLAPSCVDTTNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGD-RKQIQ 621
+ L S D + + I+ G HH+ + + G +Y G G+LG GD K+
Sbjct: 303 KSLSQLNKSEKD------KHITIANGQHHTIVCDPNGKVYALGRADYGRLGLGDGAKETA 356
Query: 622 IPTEV 626
+P +
Sbjct: 357 LPAHI 361
Score = 54.8 bits (126), Expect = 3e-07
Identities = 58/239 (24%), Positives = 102/239 (42%), Gaps = 39/239 (16%)
Query: 411 LVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGL-----------GNIDDQWTPQLVTKFL 459
++ +A+G+ H+AA+ G L T G GQLG + P LV
Sbjct: 194 IIKIASGNDHTAALTTSGNLFTLGCAEQGQLGRVKECFSARGGRRGLAYILEPALVRSKK 253
Query: 460 GRKVQSVGCGACHSVLLTR-GGELWACGASVFGQLGTGQRGKASLPVRVA----LHEPVR 514
G K + V CG+ + ++ + G +++A G + +GQLGTG PV+V L++ +
Sbjct: 254 GLKFKDVFCGSFATFVVAKTGSDVYAWGLNNYGQLGTGDVQTWHFPVKVKSLSQLNKSEK 313
Query: 515 ----ALAAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAP 570
+A G H + G+VY G + LP H
Sbjct: 314 DKHITIANGQHHTIVCDPNGKVYALG----RADYGRLGLGDGAKETALPAH--------- 360
Query: 571 SCVDTTNVRGRIVQ-ISAGWHHSCIINNMGSIYTWGLNFDGQLGSG-DRKQIQIPTEVK 627
T++ +++ ++ G S +++ G +Y+WG+ QLG+G D + P +V+
Sbjct: 361 ----ITSLDNEVIEKVACGECVSFAVSDKGELYSWGMGSCLQLGNGNDEDDVTTPAKVQ 415
Score = 42.7 bits (96), Expect = 0.001
Identities = 41/131 (31%), Positives = 55/131 (41%), Gaps = 14/131 (10%)
Query: 352 IDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGAP 410
I +A G+HHT++ NG +Y+ G +G+L +
Sbjct: 317 ITIANGQHHTIVCDPNGKVYALGRADYGRLGLGDGAKETALPA--------HITSLDNEV 368
Query: 411 LVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGN-IDDQWTPQLVT-KFLG---RKVQS 465
+ VA G S AV G L +WG G QLG GN DD TP V K L +V
Sbjct: 369 IEKVACGECVSFAVSDKGELYSWGMGSCLQLGNGNDEDDVTTPAKVQGKNLNSETHRVLG 428
Query: 466 VGCGACHSVLL 476
V G H+V+L
Sbjct: 429 VSAGGQHTVIL 439
Score = 41.5 bits (93), Expect = 0.003
Identities = 38/139 (27%), Positives = 59/139 (42%), Gaps = 25/139 (17%)
Query: 582 IVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVKIRTETQPHTMKSDS 641
IVQ+ +G H+ ++ G +YTWG N DG LG T + E QP +
Sbjct: 85 IVQVESGGMHTVALSKDGKVYTWGCNDDGALGR--------ETTSEGEEEFQPGVVSMPD 136
Query: 642 EKTTDADENMEFNTKALVGCGGDFTVYIDDDGRIYSTG-----NTHLQISNEKTKGGNRV 696
D N+ +V G T + D G +Y+ G + + + + K V
Sbjct: 137 ------DVNI-----VMVSAGDSHTAALSDQGTVYAWGTYRDASGQIGLQPDGVKKKPAV 185
Query: 697 IMMKTTKRVIKIPASRTNH 715
I+ + R+IKI AS +H
Sbjct: 186 ILTSESDRIIKI-ASGNDH 203
>SB_25012| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 436
Score = 70.9 bits (166), Expect = 5e-12
Identities = 44/136 (32%), Positives = 70/136 (51%), Gaps = 21/136 (15%)
Query: 422 AAVDAG--GRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACHSVLLTRG 479
A D+G G + TWG + QLG GN + P L+T F G+ + + CG+ H+++L
Sbjct: 105 AGCDSGENGEVFTWGHNGYSQLGNGNTNQGLYPSLLTSFQGKNITQLACGSHHTLVLNDE 164
Query: 480 GE----------------LWACGASVFGQLGTGQRGKASLPVRVALHEP--VRALAAGYF 521
GE +++ GA+ +GQLGTG + P ++A+ + V A+ Y
Sbjct: 165 GEILCGYAHSLALSDAGCIYSWGANSYGQLGTGNKAHLVTPTKIAVDKGRFVEIGASHYI 224
Query: 522 H-NLALTHKGEVYVWG 536
H + A T G+VY+WG
Sbjct: 225 HMSAAATATGKVYMWG 240
Score = 49.2 bits (112), Expect = 2e-05
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 530 GEVYVWGASP-QQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAG 588
GEV+ WG + Q+ PS T F N LA T + +I G
Sbjct: 113 GEVFTWGHNGYSQLGNGNTNQGLYPSLLT-SFQGKNITQLACGSHHTLVLNDE-GEILCG 170
Query: 589 WHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVKI 628
+ HS +++ G IY+WG N GQLG+G++ + PT++ +
Sbjct: 171 YAHSLALSDAGCIYSWGANSYGQLGTGNKAHLVTPTKIAV 210
Score = 37.9 bits (84), Expect = 0.040
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 414 VAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACH- 472
+ G+ HS A+ G + +WG +GQLG GN TP + GR V+ H
Sbjct: 167 ILCGYAHSLALSDAGCIYSWGANSYGQLGTGNKAHLVTPTKIAVDKGRFVEIGASHYIHM 226
Query: 473 SVLLTRGGELWACG 486
S T G+++ G
Sbjct: 227 SAAATATGKVYMWG 240
Score = 37.5 bits (83), Expect = 0.053
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 588 GWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEVKIRTETQPHTMKSDSEKTTDA 647
G C G ++TWG N QLG+G+ Q P+ + T Q K+ ++ +
Sbjct: 102 GCDAGCDSGENGEVFTWGHNGYSQLGNGNTNQGLYPS---LLTSFQG---KNITQLACGS 155
Query: 648 DENMEFNTKALVGCGGDFTVYIDDDGRIYSTG-NTHLQISNEKTKGGNRVIMMKTTK 703
+ N + + CG ++ + D G IYS G N++ Q+ GN+ ++ TK
Sbjct: 156 HHTLVLNDEGEILCGYAHSLALSDAGCIYSWGANSYGQLGT-----GNKAHLVTPTK 207
>SB_32347| Best HMM Match : RCC1 (HMM E-Value=0.00072)
Length = 677
Score = 70.5 bits (165), Expect = 6e-12
Identities = 30/66 (45%), Positives = 40/66 (60%)
Query: 412 VCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGAC 471
+ V GHYHS A+ A ++ +WGWGVHGQLGL +I+D P VT G V + G
Sbjct: 70 IAVVCGHYHSLALSADQQVYSWGWGVHGQLGLDSIEDALLPSHVTSLSGAFVTQLAAGYS 129
Query: 472 HSVLLT 477
H+ +LT
Sbjct: 130 HTAVLT 135
Score = 48.4 bits (110), Expect = 3e-05
Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 441 LGLGNIDDQWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQRGK 500
LG G+ P VT+ +K +V CG HS+ L+ ++++ G V GQLG
Sbjct: 47 LGQGDTQQHTRPVYVTELSDKKCIAVVCGHYHSLALSADQQVYSWGWGVHGQLGLDSIED 106
Query: 501 ASLPVRVALHEP--VRALAAGYFHNLALT 527
A LP V V LAAGY H LT
Sbjct: 107 ALLPSHVTSLSGAFVTQLAAGYSHTAVLT 135
Score = 35.9 bits (79), Expect = 0.16
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 14/77 (18%)
Query: 462 KVQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHEPVRALAA--G 519
KV SV CG H++ L R G LG G + + PV V + +A G
Sbjct: 28 KVLSVACGIEHTLALCRDG------------LGQGDTQQHTRPVYVTELSDKKCIAVVCG 75
Query: 520 YFHNLALTHKGEVYVWG 536
++H+LAL+ +VY WG
Sbjct: 76 HYHSLALSADQQVYSWG 92
Score = 31.1 bits (67), Expect = 4.6
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 318 SLTCGLAHW-AVVSDGNAR--VMMASTPVN-TELIGR-VIDVACGRHHTLILT-ENGLYS 371
S+ CG+ H A+ DG + + PV TEL + I V CG +H+L L+ + +YS
Sbjct: 31 SVACGIEHTLALCRDGLGQGDTQQHTRPVYVTELSDKKCIAVVCGHYHSLALSADQQVYS 90
Query: 372 AGDNTFGQL 380
G GQL
Sbjct: 91 WGWGVHGQL 99
Score = 31.1 bits (67), Expect = 4.6
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 581 RIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQIPTEV 626
+ + + G +HS ++ +Y+WG GQLG + +P+ V
Sbjct: 68 KCIAVVCGHYHSLALSADQQVYSWGWGVHGQLGLDSIEDALLPSHV 113
>SB_59432| Best HMM Match : MORN (HMM E-Value=9.3e-26)
Length = 1362
Score = 63.3 bits (147), Expect = 9e-10
Identities = 51/185 (27%), Positives = 76/185 (41%), Gaps = 23/185 (12%)
Query: 452 PQLVTKFLGRKVQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHE 511
P++ L + V G H+VLLT E++A G + FGQLG G R + P ++ E
Sbjct: 27 PKISPLSLPHGISKVALGTAHTVLLTFNHEVFAFGDNNFGQLGFGDRNRRRDPAKLPFFE 86
Query: 512 PVRA--LAAGYFHNLALTHKGEVYVWGASPQQV-------------XXXXXXXXXEPSSP 556
R +A G H++ L GE Y WG S E SP
Sbjct: 87 GKRVVDIACGGQHSVVLLDNGETYAWGDSSSGQCGIGKCDNNSAVDAPTKVAFTPEMKSP 146
Query: 557 TLPFHDDNDRY-LAPSCVDTTNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSG 615
FH +++ P D +I I+ G H+ +++ G+++ WGL Q G G
Sbjct: 147 QSVFHLSEEKHETQPQATDV-----KIKSIACGDCHTLALSSRGTVWAWGLGC--QTGHG 199
Query: 616 DRKQI 620
I
Sbjct: 200 SLNSI 204
Score = 56.8 bits (131), Expect = 8e-08
Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 28/155 (18%)
Query: 414 VAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACHS 473
VA G H+ + + +G GQLG G+ + + P + F G++V + CG HS
Sbjct: 41 VALGTAHTVLLTFNHEVFAFGDNNFGQLGFGDRNRRRDPAKLPFFEGKRVVDIACGGQHS 100
Query: 474 VLLTRGGELWACGASVFGQLGTGQ---RGKASLPVRVAL-----------------HE-- 511
V+L GE +A G S GQ G G+ P +VA HE
Sbjct: 101 VVLLDNGETYAWGDSSSGQCGIGKCDNNSAVDAPTKVAFTPEMKSPQSVFHLSEEKHETQ 160
Query: 512 ------PVRALAAGYFHNLALTHKGEVYVWGASPQ 540
++++A G H LAL+ +G V+ WG Q
Sbjct: 161 PQATDVKIKSIACGDCHTLALSSRGTVWAWGLGCQ 195
Score = 50.4 bits (115), Expect = 7e-06
Identities = 53/203 (26%), Positives = 82/203 (40%), Gaps = 41/203 (20%)
Query: 354 VACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGAPLV 412
VA G HT++LT N +++ GDN FGQL ++ G +V
Sbjct: 41 VALGTAHTVLLTFNHEVFAFGDNNFGQLGFGDRNRRRDPA---------KLPFFEGKRVV 91
Query: 413 CVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQ----------WTPQLVT------ 456
+A G HS + G WG GQ G+G D+ +TP++ +
Sbjct: 92 DIACGGQHSVVLLDNGETYAWGDSSSGQCGIGKCDNNSAVDAPTKVAFTPEMKSPQSVFH 151
Query: 457 ----------KFLGRKVQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQRGK-ASLP- 504
+ K++S+ CG CH++ L+ G +WA G Q G G S P
Sbjct: 152 LSEEKHETQPQATDVKIKSIACGDCHTLALSSRGTVWAWGLGC--QTGHGSLNSIVSRPK 209
Query: 505 -VRVALHEPVRALAAGYFHNLAL 526
V + V + G +H++AL
Sbjct: 210 MVEALKDKEVIGIICGAYHSIAL 232
Score = 43.6 bits (98), Expect = 8e-04
Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 4/103 (3%)
Query: 581 RIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSG---DRKQIQIPTEVKIRTETQ-PHT 636
R+V I+ G HS ++ + G Y WG + GQ G G + + PT+V E + P +
Sbjct: 89 RVVDIACGGQHSVVLLDNGETYAWGDSSSGQCGIGKCDNNSAVDAPTKVAFTPEMKSPQS 148
Query: 637 MKSDSEKTTDADENMEFNTKALVGCGGDFTVYIDDDGRIYSTG 679
+ SE+ + + CG T+ + G +++ G
Sbjct: 149 VFHLSEEKHETQPQATDVKIKSIACGDCHTLALSSRGTVWAWG 191
Score = 37.9 bits (84), Expect = 0.040
Identities = 15/31 (48%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Query: 350 RVIDVACGRHHTLILTENG-LYSAGDNTFGQ 379
RV+D+ACG H+++L +NG Y+ GD++ GQ
Sbjct: 89 RVVDIACGGQHSVVLLDNGETYAWGDSSSGQ 119
>SB_31780| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 964
Score = 59.3 bits (137), Expect = 2e-08
Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 13/188 (6%)
Query: 428 GRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELWACGA 487
G L+T+G G +G LG G + ++V LG +V+ + CG+ H + +T E++A G
Sbjct: 440 GILMTFGSGTYGCLGHGTTNYVSQAKIVEDLLGFEVEDISCGSSHIMAVTADHEVFAWGR 499
Query: 488 SVFGQLGTGQRGKASLPVRVALHEPVRA--LAAGYFHNLALTHKGEVYVWGASPQQVXXX 545
G+LGTG + + P ++L E +RA + G + A+T + ++ G++
Sbjct: 500 GDNGRLGTGSQQEYWSPKAISLPEGMRARSVHCGVDCSFAITLENKLLACGSN-----RC 554
Query: 546 XXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAGWHHSCIINNMGSIYTWG 605
P + L V N G ++ G H+ ++ G +Y++G
Sbjct: 555 NKLALDNEDGPV-----EEVAVLRQVSVPDFNSVG-TSSVAMGTSHTLVLLQNGKLYSFG 608
Query: 606 LNFDGQLG 613
N GQLG
Sbjct: 609 SNSFGQLG 616
Score = 59.3 bits (137), Expect = 2e-08
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 414 VAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACHS 473
++ G H AV A + WG G +G+LG G+ + W+P+ ++ G + +SV CG S
Sbjct: 478 ISCGSSHIMAVTADHEVFAWGRGDNGRLGTGSQQEYWSPKAISLPEGMRARSVHCGVDCS 537
Query: 474 VLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHEPV--------RALAAGYFHNLA 525
+T +L ACG++ +L V V V ++A G H L
Sbjct: 538 FAITLENKLLACGSNRCNKLALDNEDGPVEEVAVLRQVSVPDFNSVGTSSVAMGTSHTLV 597
Query: 526 LTHKGEVYVWGAS 538
L G++Y +G++
Sbjct: 598 LLQNGKLYSFGSN 610
Score = 41.9 bits (94), Expect = 0.002
Identities = 49/216 (22%), Positives = 85/216 (39%), Gaps = 16/216 (7%)
Query: 319 LTCGLAHWAVVSDGNARVMMASTPVNTELIGRVIDVACGRHHTLILT-ENGLYSAGDNTF 377
+T G + + G + + V L V D++CG H + +T ++ +++ G
Sbjct: 443 MTFGSGTYGCLGHGTTNYVSQAKIVEDLLGFEVEDISCGSSHIMAVTADHEVFAWGRGDN 502
Query: 378 GQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGAPLVCVAAGHYHSAAVDAGGRLLTWGWGV 437
G+L + L G V G S A+ +LL G
Sbjct: 503 GRLGTGSQQEYWSPKA---------ISLPEGMRARSVHCGVDCSFAITLENKLLACGSNR 553
Query: 438 HGQLGLGNIDDQWTPQLVTK------FLGRKVQSVGCGACHSVLLTRGGELWACGASVFG 491
+L L N D V + F SV G H+++L + G+L++ G++ FG
Sbjct: 554 CNKLALDNEDGPVEEVAVLRQVSVPDFNSVGTSSVAMGTSHTLVLLQNGKLYSFGSNSFG 613
Query: 492 QLGTGQRGKASLPVRVALHEPVRALAAGYFHNLALT 527
QLG + G + P V V +A G ++A++
Sbjct: 614 QLGYVREGVSRFPQLVESLNDVSYVACGDTFSVAVS 649
>SB_46796| Best HMM Match : RCC1 (HMM E-Value=3e-14)
Length = 350
Score = 58.8 bits (136), Expect = 2e-08
Identities = 43/196 (21%), Positives = 82/196 (41%), Gaps = 11/196 (5%)
Query: 439 GQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQR 498
GQLG G + P+++ + + CG H+++LT G ++ G + GQ+G G +
Sbjct: 6 GQLGHGTTERCDVPKVIDRLKMHNIVQASCGRGHTLILTDAGLVFGFGDNKLGQIGQGHQ 65
Query: 499 GKASLPVRVALHEP----VRALAAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPS 554
SLP + + P V + G ++ L G+++ +G+ S
Sbjct: 66 KPTSLPCPLQIMHPTDKKVTKVCCGAEFSMLLDENGDIFSFGSPEYGQLGHNTDGQYIVS 125
Query: 555 SPTLPFHDDNDRYLAPSCVD------TTNVRG-RIVQISAGWHHSCIINNMGSIYTWGLN 607
S + F + V+ ++ G +I + G +H+ ++ G ++TWG
Sbjct: 126 SNKMGFQCEVLPRRLVVFVERNKDGFVNHIEGVKIKDVVCGNNHTMALDEQGRVFTWGFG 185
Query: 608 FDGQLGSGDRKQIQIP 623
G+LG K +P
Sbjct: 186 GYGRLGHQQPKDEHVP 201
Score = 52.8 bits (121), Expect = 1e-06
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 29/210 (13%)
Query: 350 RVIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXX-XVLRVRLA- 406
+V V CG +++L ENG ++S G +GQL VL RL
Sbjct: 83 KVTKVCCGAEFSMLLDENGDIFSFGSPEYGQLGHNTDGQYIVSSNKMGFQCEVLPRRLVV 142
Query: 407 -------------GGAPLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQ 453
G + V G+ H+ A+D GR+ TWG+G +G+LG D+ P+
Sbjct: 143 FVERNKDGFVNHIEGVKIKDVVCGNNHTMALDEQGRVFTWGFGGYGRLGHQQPKDEHVPR 202
Query: 454 LVTKFLGRKVQSV-GCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASL---PVRVAL 509
L+T F + SV G+ +S+ + G+L+ +GQ T Q G+A++ PV+
Sbjct: 203 LLTFFNTKGNPSVIFAGSTYSMAVCM-GQLY-----FWGQ--TKQSGEAAMYPKPVQDLS 254
Query: 510 HEPVRALAAGYFHNLALTHKGEVYVWGASP 539
VR++ ++ + V WG SP
Sbjct: 255 GWQVRSVGCSK-SSIVIAADDSVVSWGPSP 283
Score = 48.4 bits (110), Expect = 3e-05
Identities = 54/219 (24%), Positives = 90/219 (41%), Gaps = 38/219 (17%)
Query: 351 VIDVACGRHHTLILTENGL-YSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGA 409
++ +CGR HTLILT+ GL + GDN GQ+ L++
Sbjct: 30 IVQASCGRGHTLILTDAGLVFGFGDNKLGQI-------GQGHQKPTSLPCPLQIMHPTDK 82
Query: 410 PLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQW-------------TPQLVT 456
+ V G S +D G + ++G +GQLG N D Q+ P+ +
Sbjct: 83 KVTKVCCGAEFSMLLDENGDIFSFGSPEYGQLG-HNTDGQYIVSSNKMGFQCEVLPRRLV 141
Query: 457 KFL------------GRKVQSVGCGACHSVLLTRGGELWACGASVFGQLGTGQRGKASLP 504
F+ G K++ V CG H++ L G ++ G +G+LG Q +P
Sbjct: 142 VFVERNKDGFVNHIEGVKIKDVVCGNNHTMALDEQGRVFTWGFGGYGRLGHQQPKDEHVP 201
Query: 505 VRVALHEP---VRALAAGYFHNLALTHKGEVYVWGASPQ 540
+ + AG +++A+ G++Y WG + Q
Sbjct: 202 RLLTFFNTKGNPSVIFAGSTYSMAVC-MGQLYFWGQTKQ 239
Score = 45.6 bits (103), Expect = 2e-04
Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 21/132 (15%)
Query: 561 HDDNDRYLAPSCVDTTNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQI 620
H +R P +D + IVQ S G H+ I+ + G ++ +G N GQ+G G +K
Sbjct: 10 HGTTERCDVPKVIDRLKMHN-IVQASCGRGHTLILTDAGLVFGFGDNKLGQIGQGHQKPT 68
Query: 621 QIPTEVKIRTETQPHTMKSDSEKTTDADENMEFNTKALVGCGGDFTVYIDDDGRIYSTGN 680
+P ++I T K V CG +F++ +D++G I+S G+
Sbjct: 69 SLPCPLQIMHPTDKKVTK--------------------VCCGAEFSMLLDENGDIFSFGS 108
Query: 681 THLQISNEKTKG 692
T G
Sbjct: 109 PEYGQLGHNTDG 120
Score = 43.6 bits (98), Expect = 8e-04
Identities = 47/194 (24%), Positives = 84/194 (43%), Gaps = 21/194 (10%)
Query: 491 GQLGTGQRGKASLPV---RVALHEPVRALAAGYFHNLALTHKGEVYVWGASPQQVXXXXX 547
GQLG G + +P R+ +H V+A + G H L LT G V+ +G +
Sbjct: 6 GQLGHGTTERCDVPKVIDRLKMHNIVQA-SCGRGHTLILTDAGLVFGFGDNK---LGQIG 61
Query: 548 XXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRIVQISAGWHHSCIINNMGSIYTWGLN 607
+P+S P + + P+ ++ ++ G S +++ G I+++G
Sbjct: 62 QGHQKPTSLPCPL-----QIMHPT-------DKKVTKVCCGAEFSMLLDENGDIFSFGSP 109
Query: 608 FDGQLGSG-DRKQIQIPTEVKIRTETQPHTMKSDSEKTTDADENMEFNTKAL-VGCGGDF 665
GQLG D + I ++ + E P + E+ D N K V CG +
Sbjct: 110 EYGQLGHNTDGQYIVSSNKMGFQCEVLPRRLVVFVERNKDGFVNHIEGVKIKDVVCGNNH 169
Query: 666 TVYIDDDGRIYSTG 679
T+ +D+ GR+++ G
Sbjct: 170 TMALDEQGRVFTWG 183
>SB_55819| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2408
Score = 58.0 bits (134), Expect = 3e-08
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 3/128 (2%)
Query: 414 VAAGHYHSAAVDAGGRLL-TWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACH 472
VA G H+ + A G + +G G +G+LGLG+ + +PQ + G + + CG
Sbjct: 1710 VACGLNHTLVLSADGNTVWAFGDGDYGKLGLGSCTAKTSPQAIDVLAGIGCKKICCGTQF 1769
Query: 473 SVLLTRGGELWACGAS-VFGQLGTGQRG-KASLPVRVALHEPVRALAAGYFHNLALTHKG 530
SV+LT G +++ G + GQ RG + ++ + + G H LALT G
Sbjct: 1770 SVVLTNDGRVFSFGQERLTGQPEGRLRGPQKPQQIQALASHFIDDVCVGAEHVLALTSTG 1829
Query: 531 EVYVWGAS 538
EV+ WG++
Sbjct: 1830 EVWGWGSN 1837
Score = 57.2 bits (132), Expect = 6e-08
Identities = 46/178 (25%), Positives = 74/178 (41%), Gaps = 13/178 (7%)
Query: 354 VACGRHHTLILTENG--LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGAPL 411
VACG +HTL+L+ +G +++ GD +G+L + G
Sbjct: 1710 VACGLNHTLVLSADGNTVWAFGDGDYGKLGLGSCTAKTSPQAIDVLAGI-------GCKK 1762
Query: 412 VCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGAC 471
+C G S + GR+ ++G G + PQ + + V GA
Sbjct: 1763 IC--CGTQFSVVLTNDGRVFSFGQERLTGQPEGRLRGPQKPQQIQALASHFIDDVCVGAE 1820
Query: 472 HSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRV--ALHEPVRALAAGYFHNLALT 527
H + LT GE+W G++V GQLG G P + + +R ++AG H+ A T
Sbjct: 1821 HVLALTSTGEVWGWGSNVDGQLGLGHSNAQREPCVIPDLKGKNIRQISAGRNHSAAWT 1878
Score = 49.6 bits (113), Expect = 1e-05
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 405 LAGGAPLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQ 464
LA +VC G + V G +L G G +G+LG+GN DD +T ++ G V
Sbjct: 1452 LASAQQVVC---GQNCTFVVQVNGTILACGEGSYGRLGMGNSDDLFTLSPISALQGYVVI 1508
Query: 465 SVGCGAC---HSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRV 507
+ HS+ LT GE+++ G +G+LG G + P ++
Sbjct: 1509 QIATSRGSDGHSLALTDSGEVFSWGDGDYGKLGHGNSDRQRRPRQI 1554
Score = 49.2 bits (112), Expect = 2e-05
Identities = 32/142 (22%), Positives = 60/142 (42%), Gaps = 7/142 (4%)
Query: 340 STPVNTELIGRVIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXX 398
+ P T+ + V CG++ T ++ NG + + G+ ++G+L
Sbjct: 1444 NVPTVTKSLASAQQVVCGQNCTFVVQVNGTILACGEGSYGRLGMGNSDDLFTLSPISALQ 1503
Query: 399 XVLRVRLAGGAPLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKF 458
+ +++A HS A+ G + +WG G +G+LG GN D Q P+ +
Sbjct: 1504 GYVVIQIATSR------GSDGHSLALTDSGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL 1557
Query: 459 LGRKVQSVGCGACHSVLLTRGG 480
G +V + + V+ T G
Sbjct: 1558 RGEEVVNWTASSSRLVMATTAG 1579
Score = 45.6 bits (103), Expect = 2e-04
Identities = 37/153 (24%), Positives = 65/153 (42%), Gaps = 20/153 (13%)
Query: 466 VGCGACHSVLLTRGGE-LWACGASVFGQLGTGQRGKASLPVRVALHEPV--RALAAGYFH 522
V CG H+++L+ G +WA G +G+LG G + P + + + + + G
Sbjct: 1710 VACGLNHTLVLSADGNTVWAFGDGDYGKLGLGSCTAKTSPQAIDVLAGIGCKKICCGTQF 1769
Query: 523 NLALTHKGEVYVWGASPQQVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRGRI 582
++ LT+ G V+ +G +++ P P + LA +D
Sbjct: 1770 SVVLTNDGRVFSFGQ--ERLTGQPEGRLRGPQKP------QQIQALASHFID-------- 1813
Query: 583 VQISAGWHHSCIINNMGSIYTWGLNFDGQLGSG 615
+ G H + + G ++ WG N DGQLG G
Sbjct: 1814 -DVCVGAEHVLALTSTGEVWGWGSNVDGQLGLG 1845
Score = 45.2 bits (102), Expect = 3e-04
Identities = 37/109 (33%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Query: 433 WGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELWACGASVFGQ 492
WG G HGQL P VTK L Q V CG + ++ G + ACG +G+
Sbjct: 1428 WGGGRHGQLAESGRGVN-VPT-VTKSLA-SAQQVVCGQNCTFVVQVNGTILACGEGSYGR 1484
Query: 493 LGTGQRGKASL--PVRVALHEPVRALAAGYF---HNLALTHKGEVYVWG 536
LG G P+ V +A H+LALT GEV+ WG
Sbjct: 1485 LGMGNSDDLFTLSPISALQGYVVIQIATSRGSDGHSLALTDSGEVFSWG 1533
>SB_20583| Best HMM Match : RCC1 (HMM E-Value=6.2e-08)
Length = 970
Score = 53.2 bits (122), Expect = 1e-06
Identities = 73/285 (25%), Positives = 114/285 (40%), Gaps = 40/285 (14%)
Query: 420 HSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKV---------QSVGCGA 470
H+A G+ LTWG+ G LG+ ++ P V L + V +++G G
Sbjct: 61 HAAVATDAGKALTWGYSPQGALGIEHLASLIVPLPVEVTLEKTVLQIETLYSIKAIGAGQ 120
Query: 471 CHSVLLTRGGELWACGASVFGQLGTGQRGKASLPVRVALHEPVRALAAGYFHNLALTH-- 528
++ + G ++A G S + T + K V+ + V ++A G +H + L
Sbjct: 121 HYACAIMTSGWMYAWGLSGAAKDET-KFVKTPTVVKGVDNARVMSMACGAYHTVLLAEGY 179
Query: 529 -------KGEVYVWGASPQ-QVXXXXXXXXXEPSSPTLPFHDDNDRYLAPSCVDTTNVRG 580
G Y WG + PS +H D D A +
Sbjct: 180 GWLGNLSSGVAYSWGRGGNGALGHGTLLSLARPSYVKRLYHGDKDGKDAKT--------- 230
Query: 581 RIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGDRKQIQ-IPTEVKI-RTET---QPH 635
+ Q++AG HS + G +YT G N GQLG ++ + +PT+V + T+T +
Sbjct: 231 -VSQVAAGRAHSAFLTKDGCVYTCGSNQYGQLGYYTKETYKLLPTKVDLGLTDTGTPRSA 289
Query: 636 TMKSDSEKTT---DADENMEFNTKALVGCG--GDFTVYIDDDGRI 675
T S SE T +D+ K G FTVY DD G I
Sbjct: 290 TELSCSEHCTMVRTSDDKCIMWGKFCYGTSLPNPFTVYHDDVGII 334
Score = 44.4 bits (100), Expect = 5e-04
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 17/109 (15%)
Query: 403 VRLAGGAPLVCVAAGHYHSAAVDAG---------GRLLTWGWGVHGQLGLGNIDDQWTPQ 453
V+ A ++ +A G YH+ + G G +WG G +G LG G + P
Sbjct: 154 VKGVDNARVMSMACGAYHTVLLAEGYGWLGNLSSGVAYSWGRGGNGALGHGTLLSLARPS 213
Query: 454 LVTKFL--------GRKVQSVGCGACHSVLLTRGGELWACGASVFGQLG 494
V + + V V G HS LT+ G ++ CG++ +GQLG
Sbjct: 214 YVKRLYHGDKDGKDAKTVSQVAAGRAHSAFLTKDGCVYTCGSNQYGQLG 262
Score = 41.5 bits (93), Expect = 0.003
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 411 LVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNI--DDQWTPQLVTKFLGRKVQSVGC 468
+V +A G +H AA+ G LLT G G HGQLG ++ D++ L++K + SV C
Sbjct: 493 IVQIACGAFHVAALTDSGELLTCGTGKHGQLGHTHMRSSDEFQTVLLSKV--ERFASVSC 550
Query: 469 GACH 472
G +
Sbjct: 551 GIAY 554
Score = 35.9 bits (79), Expect = 0.16
Identities = 15/32 (46%), Positives = 17/32 (53%)
Query: 463 VQSVGCGACHSVLLTRGGELWACGASVFGQLG 494
+ + CGA H LT GEL CG GQLG
Sbjct: 493 IVQIACGAFHVAALTDSGELLTCGTGKHGQLG 524
Score = 32.7 bits (71), Expect = 1.5
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 351 VIDVACGRHHTLILTENG-LYSAGDNTFGQL 380
V VA GR H+ LT++G +Y+ G N +GQL
Sbjct: 231 VSQVAAGRAHSAFLTKDGCVYTCGSNQYGQL 261
>SB_30518| Best HMM Match : FYVE (HMM E-Value=1.2e-18)
Length = 447
Score = 46.4 bits (105), Expect = 1e-04
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 428 GRLLTWGWGVHGQLGLGNIDDQWTP--QLVTKFLGRKVQSVGCGACHSVLLTRGGELWAC 485
G L ++G +GQLG+ D T Q V+ K+ V CG+ HS L G ++ C
Sbjct: 241 GALFSFGENDYGQLGIPE-DKLLTSYIQCVSSLSEHKISRVACGSFHSAALAEKGRMFCC 299
Query: 486 GASVFGQLG 494
G + +GQLG
Sbjct: 300 GDNTYGQLG 308
Score = 38.3 bits (85), Expect = 0.030
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Query: 350 RVIDVACGRHHTLILTENG-LYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGG 408
++ VACG H+ L E G ++ GDNT+GQL +RVR+
Sbjct: 276 KISRVACGSFHSAALAEKGRMFCCGDNTYGQL---GAHLNDNQDDHVTYNVAVRVRVPTD 332
Query: 409 APLVCVAAGHYHSAAV 424
V VA G H+A V
Sbjct: 333 FRCVHVACGDSHTAVV 348
Score = 35.1 bits (77), Expect = 0.28
Identities = 31/118 (26%), Positives = 46/118 (38%), Gaps = 14/118 (11%)
Query: 366 ENGLYSAGDNTFGQLXXXXXXXXXXXXXXXXXXXVLRVRLAGGAPLVCVAAGHYHSAAVD 425
E L+S G+N +GQL ++ VA G +HSAA+
Sbjct: 240 EGALFSFGENDYGQLGIPEDKLLTSYIQCVSSLSEHKISR--------VACGSFHSAALA 291
Query: 426 AGGRLLTWGWGVHGQLGL---GNIDDQWTPQLVTKF---LGRKVQSVGCGACHSVLLT 477
GR+ G +GQLG N DD T + + + V CG H+ ++T
Sbjct: 292 EKGRMFCCGDNTYGQLGAHLNDNQDDHVTYNVAVRVRVPTDFRCVHVACGDSHTAVVT 349
>SB_2363| Best HMM Match : RCC1 (HMM E-Value=0.00041)
Length = 234
Score = 46.4 bits (105), Expect = 1e-04
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Query: 414 VAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNID-DQWTPQLVTKFLGRKVQSVGCGACH 472
V G S A+ + G++ WG G LG G++D TP+L+ V + G H
Sbjct: 13 VCCGSQCSLALTSTGQVYVWGCGP--SLGTGSVDATSATPKLLLALQSHSVVDISVGDSH 70
Query: 473 SVLLTRGGELWACGASVFGQLGTGQ-RGKASLPVRVALHE--PVRALAAGYFHNLALT 527
V LT+ ++A G + GQ G G + P +V + V ++AG H +A T
Sbjct: 71 CVALTQDNNVYAWGNNSMGQCGQGHCTTPITKPKKVLGLDGVAVHQISAGTSHTVAWT 128
Score = 40.3 bits (90), Expect = 0.008
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 9/82 (10%)
Query: 460 GRKVQSVGCGACHSVLLTRGGEL--WACGASVFGQLGTGQRGKASLPVRVAL---HEPVR 514
G ++ V CG+ S+ LT G++ W CG S LGTG S ++ L V
Sbjct: 7 GMVIRKVCCGSQCSLALTSTGQVYVWGCGPS----LGTGSVDATSATPKLLLALQSHSVV 62
Query: 515 ALAAGYFHNLALTHKGEVYVWG 536
++ G H +ALT VY WG
Sbjct: 63 DISVGDSHCVALTQDNNVYAWG 84
Score = 36.7 bits (81), Expect = 0.092
Identities = 29/104 (27%), Positives = 37/104 (35%), Gaps = 20/104 (19%)
Query: 513 VRALAAGYFHNLALTHKGEVYVWGASPQQVXXXXXXXXXEPS-SPTLPFHDDNDRYLAPS 571
+R + G +LALT G+VYVWG P P L H
Sbjct: 10 IRKVCCGSQCSLALTSTGQVYVWGCGPSLGTGSVDATSATPKLLLALQSHS--------- 60
Query: 572 CVDTTNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSG 615
+V IS G H + ++Y WG N GQ G G
Sbjct: 61 ----------VVDISVGDSHCVALTQDNNVYAWGNNSMGQCGQG 94
>SB_29134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 45.6 bits (103), Expect = 2e-04
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 434 GWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELWACGASVFGQL 493
G +GQL G+ DD P + + + + G G H+ ++T EL+ CG + GQL
Sbjct: 60 GANSYGQLACGHTDDVIKPAVHSNWKDDVLCITGGGG-HTAMITDSRELYTCGWNNRGQL 118
Query: 494 GTGQRGKASLPVRVALHEPVRALAAGYFHNLALT 527
G G + + L PV+ ++ G+ H LA+T
Sbjct: 119 GLGDTIN-RIELHRVLIPPVKHVSCGWNHTLAIT 151
Score = 38.7 bits (86), Expect = 0.023
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 411 LVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGA 470
++C+ G H+A + L T GW GQLGLG+ ++ + + L V+ V CG
Sbjct: 88 VLCITGGGGHTAMITDSRELYTCGWNNRGQLGLGDTINRIE---LHRVLIPPVKHVSCGW 144
Query: 471 CHSVLLT 477
H++ +T
Sbjct: 145 NHTLAIT 151
Score = 32.7 bits (71), Expect = 1.5
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 576 TNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQLGSGD 616
+N + ++ I+ G H+ +I + +YT G N GQLG GD
Sbjct: 82 SNWKDDVLCITGGGGHTAMITDSRELYTCGWNNRGQLGLGD 122
>SB_23006| Best HMM Match : RCC1 (HMM E-Value=0.014)
Length = 52
Score = 36.7 bits (81), Expect = 0.092
Identities = 19/48 (39%), Positives = 25/48 (52%)
Query: 436 GVHGQLGLGNIDDQWTPQLVTKFLGRKVQSVGCGACHSVLLTRGGELW 483
G +G+LG G D P V +G V V CG+ SV LTR G ++
Sbjct: 3 GDYGKLGRGGSDGCKIPMKVESLIGLGVSKVECGSQFSVALTRSGAVY 50
>SB_30631| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 32.3 bits (70), Expect = 2.0
Identities = 20/67 (29%), Positives = 27/67 (40%)
Query: 285 CAVEAREPCQDIHLEVTQPPSDTWKNQVFTPRRSLTCGLAHWAVVSDGNARVMMASTPVN 344
C E E EVT +T + V P L + WA D +ARV++ T +
Sbjct: 19 CTTECAEADVQATSEVTVVSVETQTDAVPKPNSELRQAIIAWATCDDRSARVVLVGTSLF 78
Query: 345 TELIGRV 351
L G V
Sbjct: 79 VALAGSV 85
>SB_15184| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 31.5 bits (68), Expect = 3.5
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 890 PNATVNIFEQDLSGKAADVIDKLINIFPVDAALWEICFRLSKDFYINNSLSITELERVLR 949
P +T++ F Q L V ++IN L+E F+ K + + SL+ITE+ LR
Sbjct: 108 PISTLSTFTQVLEKL---VYQQIINYVEKQNILYECQFQFRKGY--STSLAITEIINTLR 162
Query: 950 KYMESNATTMITAILYSK 967
K +++N T + +SK
Sbjct: 163 KAIDNNMYTCGVFLDFSK 180
>SB_18199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 31.5 bits (68), Expect = 3.5
Identities = 31/93 (33%), Positives = 38/93 (40%), Gaps = 10/93 (10%)
Query: 406 AGGAPLVCVAAGHYHSAAVDAGGRLLTWGWGVHGQLGLG--NIDDQWTPQLVTKFLGRKV 463
AGG + V AG A V AGG G V G G G + V +G V
Sbjct: 117 AGGCGVAVVGAGGCGVAVVGAGG----CGVAVVGAGGCGVAVVGAGGCGVAVVGAVGCGV 172
Query: 464 QSVGCGACHSVLLTRGGELWACGASVFGQLGTG 496
VG G C ++ GG CG +V G +G G
Sbjct: 173 AVVGAGGCGVAVVGAGG----CGVAVVGAVGCG 201
>SB_17488| Best HMM Match : Phi-29_GP3 (HMM E-Value=0.69)
Length = 250
Score = 31.5 bits (68), Expect = 3.5
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 890 PNATVNIFEQDLSGKAADVIDKLINIFPVDAALWEICFRLSKDFYINNSLSITELERVLR 949
P +T++ F Q L V ++IN L+E F+ K + + SL+ITE+ LR
Sbjct: 150 PISTLSTFTQVLEKL---VYQQIINYVEKQNILYECQFQFRKGY--STSLAITEIINTLR 204
Query: 950 KYMESNATTMITAILYSK 967
K +++N T + +SK
Sbjct: 205 KAIDNNMYTCGVFLDFSK 222
>SB_2820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1140
Score = 30.7 bits (66), Expect = 6.1
Identities = 28/116 (24%), Positives = 55/116 (47%), Gaps = 10/116 (8%)
Query: 568 LAPSCV--DTTNVRGRIVQISAGWHHSCIINNMGSIYTWGLNFDGQ--LGSGDRKQIQIP 623
L+ +CV D +V + + G HH + N IYT + + G+ S R ++ P
Sbjct: 531 LSATCVGPDMESVATSVTKERDGNHHIRFMPNRSGIYTLSVFYGGREVTNSPLRLRVGDP 590
Query: 624 TEVKIRTETQPHTM---KSDSEKTTDADENMEFNTKALVGCGGDF---TVYIDDDG 673
+ V++R + T+ ++ + D ++++E T A+ G F T+ ++DG
Sbjct: 591 SSVRLRESVRQSTVYNTMTEVDVPIDVEDDVEEITAAVHGPNDQFVKSTLSKENDG 646
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.321 0.135 0.421
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,945,740
Number of Sequences: 59808
Number of extensions: 1272461
Number of successful extensions: 2604
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2270
Number of HSP's gapped (non-prelim): 230
length of query: 993
length of database: 16,821,457
effective HSP length: 89
effective length of query: 904
effective length of database: 11,498,545
effective search space: 10394684680
effective search space used: 10394684680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 65 (30.3 bits)
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