Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000414-TA|BGIBMGA000414-PA|IPR000637|HMG-I and HMG-Y,
DNA-binding, IPR001965|Zinc finger, PHD-type, IPR011011|Zinc finger,
FYVE/PHD-type, IPR010993|Sterile alpha motif homology
(454 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 7e-06
SB_27477| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.013
SB_19784| Best HMM Match : PHD (HMM E-Value=0.0006) 38 0.013
SB_17570| Best HMM Match : PHD (HMM E-Value=0.0006) 38 0.013
SB_8127| Best HMM Match : RVT_1 (HMM E-Value=0) 38 0.013
SB_7296| Best HMM Match : PHD (HMM E-Value=0.0013) 38 0.013
SB_2748| Best HMM Match : Exo_endo_phos (HMM E-Value=1.7e-08) 38 0.013
SB_54423| Best HMM Match : RVT_1 (HMM E-Value=7.7e-32) 38 0.013
SB_43061| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.013
SB_44729| Best HMM Match : SET (HMM E-Value=0) 38 0.022
SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.029
SB_48719| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.039
SB_39590| Best HMM Match : PHD (HMM E-Value=2.2e-18) 37 0.039
SB_32425| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.039
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 37 0.039
SB_41513| Best HMM Match : RVT_1 (HMM E-Value=8.9e-21) 36 0.051
SB_58672| Best HMM Match : PHD (HMM E-Value=3e-18) 36 0.051
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.051
SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.090
SB_50676| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.090
SB_6618| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.12
SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.16
SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.21
SB_51046| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.27
SB_31078| Best HMM Match : PHD (HMM E-Value=7.4e-09) 34 0.27
SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28) 33 0.36
SB_32904| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.36
SB_29863| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.36
SB_872| Best HMM Match : CUB (HMM E-Value=3.1e-07) 33 0.48
SB_35561| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00092) 33 0.63
SB_36593| Best HMM Match : PHD (HMM E-Value=3.4e-18) 33 0.63
SB_53367| Best HMM Match : RVT_1 (HMM E-Value=0) 32 0.83
SB_21746| Best HMM Match : PHD (HMM E-Value=0.066) 32 0.83
SB_18309| Best HMM Match : Exo_endo_phos (HMM E-Value=2.3e-09) 32 0.83
SB_52564| Best HMM Match : Exo_endo_phos (HMM E-Value=3.2e-09) 32 0.83
SB_9777| Best HMM Match : PHD (HMM E-Value=0.066) 32 0.83
SB_6967| Best HMM Match : PHD (HMM E-Value=1.2e-08) 32 0.83
SB_2883| Best HMM Match : Exo_endo_phos (HMM E-Value=2.1e-09) 32 0.83
SB_39703| Best HMM Match : PHD (HMM E-Value=9.3e-12) 32 1.1
SB_25624| Best HMM Match : PHD (HMM E-Value=1.3e-17) 32 1.1
SB_46020| Best HMM Match : PHD (HMM E-Value=9.3e-12) 32 1.1
SB_53804| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_20715| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_9457| Best HMM Match : PHD (HMM E-Value=3.3e-08) 31 1.5
SB_35730| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.9
SB_25392| Best HMM Match : PHD (HMM E-Value=0.0062) 31 1.9
SB_8023| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.9
SB_52616| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.9
SB_33821| Best HMM Match : zf-MIZ (HMM E-Value=1.3e-29) 31 1.9
SB_44732| Best HMM Match : TSP_1 (HMM E-Value=0) 31 2.5
SB_40804| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.5
SB_36259| Best HMM Match : PHD (HMM E-Value=5.3e-05) 31 2.5
SB_22901| Best HMM Match : PHD (HMM E-Value=5.3e-05) 31 2.5
SB_21083| Best HMM Match : PHD (HMM E-Value=5.3e-05) 31 2.5
SB_21010| Best HMM Match : PHD (HMM E-Value=7e-10) 31 2.5
SB_7292| Best HMM Match : RVT_1 (HMM E-Value=0) 31 2.5
SB_3579| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.5
SB_39447| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.5
SB_33045| Best HMM Match : RVT_1 (HMM E-Value=3.4e-18) 31 2.5
SB_24847| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.5
SB_10962| Best HMM Match : PHD (HMM E-Value=5.3e-05) 31 2.5
SB_6377| Best HMM Match : Exo_endo_phos (HMM E-Value=6.5e-10) 31 2.5
SB_55826| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.4
SB_7039| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.4
SB_54400| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.4
SB_37260| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.4
SB_29231| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.5
SB_54962| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.5
SB_31839| Best HMM Match : Exo_endo_phos (HMM E-Value=1.3e-11) 30 4.5
SB_1597| Best HMM Match : PHD (HMM E-Value=1.4e-05) 30 4.5
SB_19393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_43994| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_9001| Best HMM Match : PHD (HMM E-Value=0.00096) 29 5.9
SB_6668| Best HMM Match : PHD (HMM E-Value=0.00096) 29 5.9
SB_21040| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.8
SB_19322| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.8
SB_15137| Best HMM Match : SRCR (HMM E-Value=4.9e-28) 29 7.8
SB_13533| Best HMM Match : C1_4 (HMM E-Value=0.66) 29 7.8
SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43) 29 7.8
SB_45285| Best HMM Match : AT_hook (HMM E-Value=0.13) 29 7.8
SB_40323| Best HMM Match : zf-C3HC4 (HMM E-Value=0.42) 29 7.8
SB_28309| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.8
SB_12852| Best HMM Match : Mic1 (HMM E-Value=0.32) 29 7.8
SB_6963| Best HMM Match : PHD (HMM E-Value=0.054) 29 7.8
>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4529
Score = 49.2 bits (112), Expect = 7e-06
Identities = 39/169 (23%), Positives = 64/169 (37%), Gaps = 13/169 (7%)
Query: 162 PSKRKRGRPVGSLNK------STIKKRLMVAGHIKDDAPLSESQFSLDGSGDEIDQEDSL 215
P KRGRP L K S K+ + + + E L + +D
Sbjct: 687 PKHEKRGRPPTKLKKQNSVQPSPGKENVSGVANSAEPPTKEEESEGLHSTLVLFSADDEF 746
Query: 216 PHEESGGVCSVCLVQKPRGSNDRLVECRDCSNKAHISCLQSGSNILKPRPDNTWQCPHCK 275
++ +C + P G +L+ C C H C+ G + K W+C C
Sbjct: 747 TTKQDMCLCCGSFGKGPEG---QLIVCSQCGQCFHPYCV--GVKVNKMILSKGWRCLDCT 801
Query: 276 TCVICCETNDAGVLTVCSVCSDAYHALCHAPQIPDRLKAWDQWECNNCL 324
C C + +D L +C C +YH C P + +++ W+C C+
Sbjct: 802 LCEGCGKGSDEARLLLCDSCDISYHTYCLDPPL-EKVPP-GGWKCKWCV 848
>SB_27477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1800
Score = 38.3 bits (85), Expect = 0.013
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 213 DSLPHEESGGVCSVCLVQKPRGSNDRLVECRDCSNKAHISCLQ---SGSNILKPRPDNTW 269
D P+ CSVCL R N R V C C ++HI C+ S +K ++TW
Sbjct: 1000 DVSPNPGPSEKCSVCLRTIAR--NHRAVLCDCCKGQSHIKCVNVKPSEYKRIKQMLNDTW 1057
Query: 270 QCPHC 274
CP C
Sbjct: 1058 ICPGC 1062
>SB_19784| Best HMM Match : PHD (HMM E-Value=0.0006)
Length = 198
Score = 38.3 bits (85), Expect = 0.013
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 213 DSLPHEESGGVCSVCLVQKPRGSNDRLVECRDCSNKAHISCLQ---SGSNILKPRPDNTW 269
D P+ CSVCL R N R V C C ++HI C+ S +K ++TW
Sbjct: 28 DVSPNPGPSEKCSVCLRTIAR--NHRAVLCDCCKGQSHIKCVNVKPSEYKRIKQMLNDTW 85
Query: 270 QCPHC 274
CP C
Sbjct: 86 ICPGC 90
>SB_17570| Best HMM Match : PHD (HMM E-Value=0.0006)
Length = 243
Score = 38.3 bits (85), Expect = 0.013
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 213 DSLPHEESGGVCSVCLVQKPRGSNDRLVECRDCSNKAHISCLQ---SGSNILKPRPDNTW 269
D P+ CSVCL R N R V C C ++HI C+ S +K ++TW
Sbjct: 95 DVSPNPGPSEKCSVCLRTIAR--NHRAVLCDCCKGQSHIKCVNVKPSEYKRIKQMLNDTW 152
Query: 270 QCPHC 274
CP C
Sbjct: 153 ICPGC 157
>SB_8127| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1623
Score = 38.3 bits (85), Expect = 0.013
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 213 DSLPHEESGGVCSVCLVQKPRGSNDRLVECRDCSNKAHISCLQ---SGSNILKPRPDNTW 269
D P+ CSVCL R N R V C C ++HI C+ S +K ++TW
Sbjct: 95 DVSPNPGPSEKCSVCLRTIAR--NHRAVLCDCCKGQSHIKCVNVKPSEYKRIKQMLNDTW 152
Query: 270 QCPHC 274
CP C
Sbjct: 153 ICPGC 157
>SB_7296| Best HMM Match : PHD (HMM E-Value=0.0013)
Length = 873
Score = 38.3 bits (85), Expect = 0.013
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Query: 224 CSVCLVQKPRGSNDRLVECRDCSNKAHISCLQSGSNILKPRPDN--TWQCPHC 274
C +C KP SN R ++C C H SC Q G++ ++ TW CP C
Sbjct: 672 CGICA--KPVKSNQRGIQCDSCDLWFHSSCCQIGNSTYNSLANSSCTWICPCC 722
>SB_2748| Best HMM Match : Exo_endo_phos (HMM E-Value=1.7e-08)
Length = 438
Score = 38.3 bits (85), Expect = 0.013
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 213 DSLPHEESGGVCSVCLVQKPRGSNDRLVECRDCSNKAHISCLQ---SGSNILKPRPDNTW 269
D P+ CSVCL R N R V C C ++HI C+ S +K ++TW
Sbjct: 95 DVSPNPGPSEKCSVCLRTIAR--NHRAVLCDCCKGQSHIKCVNVKPSEYKRIKQMLNDTW 152
Query: 270 QCPHC 274
CP C
Sbjct: 153 ICPGC 157
>SB_54423| Best HMM Match : RVT_1 (HMM E-Value=7.7e-32)
Length = 775
Score = 38.3 bits (85), Expect = 0.013
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 213 DSLPHEESGGVCSVCLVQKPRGSNDRLVECRDCSNKAHISCLQ---SGSNILKPRPDNTW 269
D P+ CSVCL R N R V C C ++HI C+ S +K ++TW
Sbjct: 95 DVSPNPGPSEKCSVCLRTIAR--NHRAVLCDCCKGQSHIKCVNVKPSEYKRIKQMLNDTW 152
Query: 270 QCPHC 274
CP C
Sbjct: 153 ICPGC 157
>SB_43061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1396
Score = 38.3 bits (85), Expect = 0.013
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 213 DSLPHEESGGVCSVCLVQKPRGSNDRLVECRDCSNKAHISCLQ---SGSNILKPRPDNTW 269
D P+ CSVCL R N R V C C ++HI C+ S +K ++TW
Sbjct: 743 DVSPNPGPSEKCSVCLRTIAR--NHRAVLCDCCKGQSHIKCVNVKPSEYKRIKQMLNDTW 800
Query: 270 QCPHC 274
CP C
Sbjct: 801 ICPGC 805
>SB_44729| Best HMM Match : SET (HMM E-Value=0)
Length = 1112
Score = 37.5 bits (83), Expect = 0.022
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 15/119 (12%)
Query: 224 CSVCLVQKPRGSNDRLVECRDCSNKAHISCLQSG-----SNIL---KPRPDNTWQCPHCK 275
CS C+ K + RL +C C H CL +G S+++ K N + H
Sbjct: 505 CSTCISNKTPVNRGRLTKCIRCPTAYHAGCLVAGCMPITSHLMVCAKHFLPNKSKAHHTH 564
Query: 276 TCV-ICCETNDAGVLTVCSVCSDAYHALCHAPQ-IPDRLKAWDQWECNNCLESRPTVIG 332
V C + G L C C A+H C + + IP+ ++ C +C+E + + G
Sbjct: 565 VNVNWCFVCSIGGTLICCESCPAAFHPECISYEGIPE-----GRFYCKDCVEGKSLLYG 618
>SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1459
Score = 37.1 bits (82), Expect = 0.029
Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 136 TRSTAVRVGERRKMAKKVFDPSDNNVPSKRKRGRP-VGSL-NKSTIKKRL-MVAGHIKDD 192
TR AV +G R+ K F D N+ K R V S+ N S + L M+ G+I D
Sbjct: 1095 TRLAAVELGIERRYLKHPFR-DDGNITHALKVWRAAVASVSNASQLAMCLSMLVGYIAWD 1153
Query: 193 APLSE--SQFSLDGSGDEI----DQEDSLPHEE---SGGVCSVCLVQKPRGSNDRLVECR 243
+ + Q G +E+ D D H + G + C+ P G ++ +C
Sbjct: 1154 KSIMKVFCQMCRTGDNEELLLLCDGCDRGYHTYCCMAAGGDNCCVCGGPAG---KMAKCD 1210
Query: 244 DCSNKAHISCLQSGSNILKPRPDNTWQCPHCK 275
+C H+ CL+ L P +W CP CK
Sbjct: 1211 NCPRNFHLKCLEPP---LVKMPRVSWTCPKCK 1239
>SB_48719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1880
Score = 36.7 bits (81), Expect = 0.039
Identities = 26/117 (22%), Positives = 49/117 (41%), Gaps = 6/117 (5%)
Query: 163 SKRKRGRPVGSLNKSTIKKRLMVAGHIKDDAPLSESQFSLDGSGDEIDQEDSLPHEESGG 222
+KR +GR + N + + ++ +G I+ + ++S G G + ++ +
Sbjct: 1676 TKRSKGRILYYSNSTASFQLVLRSGDIEQNPGPTKSGQMKHGIGSKQRTTGNIHKVPASL 1735
Query: 223 VCSVCLVQKPRGSNDRLVECRDCSNKAHISCLQSGSNILKPRPDNTWQCPHCKTCVI 279
C C +K N + V C C + HI C + + + TW CP C V+
Sbjct: 1736 KCDNC--EKTIRKNQKSVACEVCFGQQHIKCTELNVKCV----NATWTCPKCTLSVL 1786
>SB_39590| Best HMM Match : PHD (HMM E-Value=2.2e-18)
Length = 1284
Score = 36.7 bits (81), Expect = 0.039
Identities = 24/92 (26%), Positives = 33/92 (35%), Gaps = 7/92 (7%)
Query: 213 DSLPHEESGGVCSVCLVQKPRGSNDRLVECRDCSNKAHISCLQSGSNILKPRPDNTWQ-- 270
D P +E C C G D+L+ C C H+ CL ++ ++TW
Sbjct: 849 DEEPIDEDSWCCDSCSTCVVCGQQDKLLMCDKCQRGYHVDCLGPSYPVVSEGSEDTWDPE 908
Query: 271 --CPHCKT-CVICCETNDAGVLTVCSVCSDAY 299
H T C C D G C +C Y
Sbjct: 909 AVWMHEFTHCYDCGTAWDNG--NYCPICEKCY 938
Score = 31.1 bits (67), Expect = 1.9
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 7/67 (10%)
Query: 219 ESGGVCSVCLVQKPRGSND---RLVECRDCSNKAHISCLQSGSNILKPRPDNTWQCPHCK 275
++G C +C +K ND +++ C DC + H SC + + D P
Sbjct: 926 DNGNYCPIC--EKCYSDNDFDSKMMHCNDCQHWVHASCQNINPDEYECLSDLPDSIPF-- 981
Query: 276 TCVICCE 282
C +CC+
Sbjct: 982 VCKLCCQ 988
>SB_32425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 770
Score = 36.7 bits (81), Expect = 0.039
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 11/59 (18%)
Query: 279 ICCETND-----AGVLTVCSVCSDAYHALCH-APQIPDRLKAWDQWECNNCLESRPTVI 331
+CC ND + V+ C +C+ A H C+ P IP+ QW C CL+S V+
Sbjct: 259 VCCICNDGECQNSNVILFCDMCNLAVHQECYGVPYIPE-----GQWLCRRCLQSPSRVV 312
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 36.7 bits (81), Expect = 0.039
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 5/58 (8%)
Query: 266 DNTWQCPHCKTCVICCETNDAGVLTVCSVCSDAYHALCHAPQIPDRLKAWDQWECNNC 323
++ + H TC +C E G L C +C AYH C P P R W C C
Sbjct: 1719 ESAGESDHGDTCAVCSE---GGELLCCDICPLAYHVHCAYP--PLRRVPRGNWACQVC 1771
Score = 33.5 bits (73), Expect = 0.36
Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 227 CLVQKPRGSNDRLVECRDCSNKAHISCLQSGSNILKPRPDNTWQCPHCK 275
C + + +G ++++ C C H+ CL+ +K P+ W CP C+
Sbjct: 1627 CKLCRRKGDAEKMLLCDACDRGHHMYCLKPP---IKHIPEGNWFCPDCR 1672
>SB_41513| Best HMM Match : RVT_1 (HMM E-Value=8.9e-21)
Length = 1080
Score = 36.3 bits (80), Expect = 0.051
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 224 CSVCLVQKPRGSNDRLVECRDCSNKAHISCLQSGSNILKPRPDN--TWQCPHC 274
C VC K SN R ++C C H+ C+Q + I ++ TW+C C
Sbjct: 100 CGVC--SKAVRSNQRAIQCDFCDIWYHVKCMQMSTEIYDSLANSSCTWECTDC 150
>SB_58672| Best HMM Match : PHD (HMM E-Value=3e-18)
Length = 458
Score = 36.3 bits (80), Expect = 0.051
Identities = 24/92 (26%), Positives = 33/92 (35%), Gaps = 7/92 (7%)
Query: 213 DSLPHEESGGVCSVCLVQKPRGSNDRLVECRDCSNKAHISCLQSGSNILKPRPDNTWQ-- 270
D P +E C C G D+L+ C C H+ CL ++ ++TW
Sbjct: 190 DEEPIDEDSWCCDSCSTCVVCGQQDKLLMCDKCQRGYHVDCLGPSYPVVPEGSEDTWDPE 249
Query: 271 --CPHCKT-CVICCETNDAGVLTVCSVCSDAY 299
H T C C D G C +C Y
Sbjct: 250 AVWMHEFTHCYDCGTAWDNG--NYCPICEKCY 279
Score = 31.1 bits (67), Expect = 1.9
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 7/67 (10%)
Query: 219 ESGGVCSVCLVQKPRGSND---RLVECRDCSNKAHISCLQSGSNILKPRPDNTWQCPHCK 275
++G C +C +K ND +++ C DC + H SC + + D P
Sbjct: 267 DNGNYCPIC--EKCYSDNDFDSKMMHCNDCQHWVHASCQNINPDEYECLSDLPDSIPF-- 322
Query: 276 TCVICCE 282
C +CC+
Sbjct: 323 VCKLCCQ 329
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 36.3 bits (80), Expect = 0.051
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 5/54 (9%)
Query: 224 CSVCLVQKPRGSNDRLVECRDCSNKAHISCLQSGSNI---LKPRPDNTWQCPHC 274
CS C KP SN R + C +C H C+ N P+ TW C C
Sbjct: 211 CSACT--KPTKSNQRAICCDECGQWTHAKCISMSYNSYLRYSNNPNLTWICSSC 262
>SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1676
Score = 35.5 bits (78), Expect = 0.090
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Query: 224 CSVCLVQKPRGSNDRLVECRDCSNKAHISCL-QSGSNILKPRPDN--TWQCPHC 274
C +C +KP SN + +EC +C H C+ S + K D+ TW C C
Sbjct: 107 CGIC--EKPTKSNQKAIECEECCCWFHAKCICMSAQSYNKLGNDSKLTWICNQC 158
>SB_50676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 838
Score = 35.5 bits (78), Expect = 0.090
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Query: 224 CSVCLVQKPRGSNDRLVECRDCSNKAHISCL-QSGSNILKPRPDN--TWQCPHC 274
C +C +KP SN + +EC +C H C+ S + K D+ TW C C
Sbjct: 107 CGIC--EKPTKSNQKAIECEECCCWFHAKCICMSAQSYNKLGNDSKLTWICNQC 158
>SB_6618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 574
Score = 35.1 bits (77), Expect = 0.12
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Query: 208 EIDQEDSLPHEESGGVCSVCLVQKPRGSNDRLVECRDCSNKAHISCLQSGSNILKPRPDN 267
+I E + EE + C V DRL+ C DC H+ CL S + P
Sbjct: 134 KIPVEKVIEEEEWEDEPTYCEVCHDCDREDRLLLCDDCDKGYHMECLTSPLEFV---PIE 190
Query: 268 TWQCPHCK 275
W CP C+
Sbjct: 191 EWFCPICR 198
>SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1789
Score = 34.7 bits (76), Expect = 0.16
Identities = 34/144 (23%), Positives = 53/144 (36%), Gaps = 9/144 (6%)
Query: 132 SNNTTRSTAVRVGERRKMAKKVFDPSDNNVPSKRKRGRPVGSLNKSTIKKRLMVAGHIKD 191
S N T V+ +RK + D SDN++ R + K +IK + K
Sbjct: 360 SKNKKAETKVKTRGKRKNDDRDDDESDNSIREIRVSKSRKKVVRKPSIKIKDTTIKKDKH 419
Query: 192 DAPLSESQFSLDGSGDEIDQEDSLPHEESGGVCSVCLVQKPRGSNDRLVECRDCSNKAHI 251
+ + G E++ S + C VC K G +L+ C C H+
Sbjct: 420 SKRRHRTCDDDEVMGVEVEMTSSSSEDIHSDYCRVC---KDGG---QLLCCDKCPMAYHL 473
Query: 252 SCLQSGSNILKPRPDNTWQCPHCK 275
CL + P W+CP C+
Sbjct: 474 KCLIPP---MMRVPTGEWKCPRCQ 494
Score = 32.7 bits (71), Expect = 0.63
Identities = 17/51 (33%), Positives = 20/51 (39%), Gaps = 5/51 (9%)
Query: 273 HCKTCVICCETNDAGVLTVCSVCSDAYHALCHAPQIPDRLKAWDQWECNNC 323
H C +C D G L C C AYH C P P +W+C C
Sbjct: 448 HSDYCRVC---KDGGQLLCCDKCPMAYHLKCLIP--PMMRVPTGEWKCPRC 493
>SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1234
Score = 34.3 bits (75), Expect = 0.21
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 224 CSVCLVQKPRGSNDRLVECRDCSNKAHISCLQSGSNILKPRPDNTWQCPHCK 275
C VC +K R S++ L+ C +C+ H+ CL+ L P W+CP CK
Sbjct: 899 CKVCR-RKSR-SDETLLLCDECNMGYHLFCLRPS---LDRIPLGEWKCPACK 945
Score = 30.3 bits (65), Expect = 3.4
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 3/45 (6%)
Query: 280 CCETNDAG-VLTVCSVCSDAYHALCHAPQIPDRLKAWDQWECNNC 323
C E G L C C YH CH P P R W C+ C
Sbjct: 989 CHECEQGGDELICCDGCPRVYHRECHHP--PLRYVPRGSWVCSGC 1031
>SB_51046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 261
Score = 33.9 bits (74), Expect = 0.27
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 43 DQESKYSKKQLENIVNKELSSGSLVKLPNGNLALGPADHDVDSSDSFRFESNADSNTKMT 102
++E+ + Q N V K + K P + A G +D D DSSDS S+ DS++ +
Sbjct: 78 EEEANDDQAQPGNEVEKGATEDPSAKKPRTD-AEGSSDSDSDSSDS--SGSDDDSSSSSS 134
Query: 103 SSANSSCRSSPQ 114
SS++SS SS +
Sbjct: 135 SSSSSSSSSSEE 146
>SB_31078| Best HMM Match : PHD (HMM E-Value=7.4e-09)
Length = 241
Score = 33.9 bits (74), Expect = 0.27
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 5/54 (9%)
Query: 224 CSVCLVQKPRGSNDRLVECRDCSNKAHISCL---QSGSNILKPRPDNTWQCPHC 274
C +C QKP SN R ++C +C H C+ N L W C C
Sbjct: 10 CGIC--QKPTRSNQRAIQCDECDMWYHTKCIAMTAQSYNRLGSDSQLAWLCNKC 61
>SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28)
Length = 440
Score = 33.5 bits (73), Expect = 0.36
Identities = 27/126 (21%), Positives = 52/126 (41%), Gaps = 1/126 (0%)
Query: 90 RFESNADSNTKMTSSANSSCRSSPQXXXXXXXXXXXXXXXXHSNNTTRSTAVRVGERRKM 149
R S++ S ++ S + S+ +S + + +RS ++ ++
Sbjct: 307 RSRSSSRSKSRKKSGSRSNSQSKQKSRSRSRSNSQSRKKSSSKKSRSRSRSISQSRKKVK 366
Query: 150 AKKVFDPSDNNVPSKRK-RGRPVGSLNKSTIKKRLMVAGHIKDDAPLSESQFSLDGSGDE 208
+KK S +N PS++K R + S + S KKR + K ++ S S D
Sbjct: 367 SKKSRSRSHSNSPSRKKARSKKSRSRSLSKSKKRRSRSPITKKESNSKRHSHSRSMSPDS 426
Query: 209 IDQEDS 214
I ++ S
Sbjct: 427 IKEKRS 432
>SB_32904| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 33.5 bits (73), Expect = 0.36
Identities = 26/119 (21%), Positives = 50/119 (42%), Gaps = 5/119 (4%)
Query: 40 AASDQESKYSKKQLENIVNKELSSGSLVKLPNGNLALGPADHDVDSSDSFRFESNADSNT 99
++S S+ S + N SS S +G+ + ++ + +S+ S S+++SN+
Sbjct: 118 SSSSNSSRSSSSSSNSNSNSSSSSSSSSSSSSGSSSSSNSNSNSNSNSSSSSNSSSNSNS 177
Query: 100 KMTSSANSSCRS-----SPQXXXXXXXXXXXXXXXXHSNNTTRSTAVRVGERRKMAKKV 153
+SS+NSS S S +SN+ + S++ R +A V
Sbjct: 178 NSSSSSNSSSNSNSSSNSSSSSNSSSNSSRSSSSSSNSNSNSSSSSSRSSSSSSVAVAV 236
>SB_29863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 590
Score = 33.5 bits (73), Expect = 0.36
Identities = 27/85 (31%), Positives = 34/85 (40%), Gaps = 16/85 (18%)
Query: 271 CPHCKTCVICCETNDAGVLTVCSVCSDAYHALCHAPQIPDRLKAW-----DQWECNNCLE 325
CP C V C + VC+ C D HA C AP +K + W C+NCL
Sbjct: 79 CPVCDKAVKCNQKR-----YVCATCKDTTHARC-APISGLNIKTFRSDSPRSWTCSNCLL 132
Query: 326 SRPTVIGSPAIIPRSFDYSGQNSPN 350
S G RS + SG + N
Sbjct: 133 SEMPFFGQ-----RSLNTSGLSDGN 152
>SB_872| Best HMM Match : CUB (HMM E-Value=3.1e-07)
Length = 423
Score = 33.1 bits (72), Expect = 0.48
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 203 DGSGDEIDQEDSLPHEESGGVCSVCLVQKPRGSNDRLVECRDCSNKAHISCLQSGSNIL 261
DG D +D+ + + GG+ V G+ D + EC N IS L SG+++L
Sbjct: 273 DGDYDNVDECEGYDDDRDGGIYDK--VDDAGGNYDNVDECEGDDNNRSISLLSSGNSML 329
>SB_35561| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00092)
Length = 813
Score = 32.7 bits (71), Expect = 0.63
Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 11/67 (16%)
Query: 271 CPHCKTCVICCETNDAGVLTVCSVCSDAYHALCHAPQIPDRLKAW-----DQWECNNCLE 325
CP C V C + +C+ C D HA C AP +K + W C+NCL
Sbjct: 111 CPVCDNAVKCNQKR-----YICATCKDTSHARC-APISGLNIKTFRSDSPRSWTCSNCLL 164
Query: 326 SRPTVIG 332
S G
Sbjct: 165 SEMPFFG 171
>SB_36593| Best HMM Match : PHD (HMM E-Value=3.4e-18)
Length = 134
Score = 32.7 bits (71), Expect = 0.63
Identities = 17/51 (33%), Positives = 20/51 (39%), Gaps = 5/51 (9%)
Query: 273 HCKTCVICCETNDAGVLTVCSVCSDAYHALCHAPQIPDRLKAWDQWECNNC 323
H C +C D G L C C AYH C P P +W+C C
Sbjct: 10 HSDYCRVC---KDGGQLLCCDKCPMAYHLKCLIP--PMMRVPTGEWKCPRC 55
>SB_53367| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1025
Score = 32.3 bits (70), Expect = 0.83
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 224 CSVCLVQKPRGSNDRLVECRDCSNKAHISCL 254
C +C QKP SN R ++C +C H C+
Sbjct: 107 CGIC--QKPTRSNQRAIQCDECDMWYHTKCI 135
>SB_21746| Best HMM Match : PHD (HMM E-Value=0.066)
Length = 203
Score = 32.3 bits (70), Expect = 0.83
Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Query: 224 CSVCLVQKPRGSNDRLVECRDCSNKAHISCLQSGSNILKPRPDNT--WQCPHCKTCVICC 281
C +C KP N R ++C C +HI CL + I +++ W+C C
Sbjct: 100 CGIC--SKPVRINQRGIQCDFCDIWSHIRCLNMNTIIYDALANSSCVWECCACGMPNFSS 157
Query: 282 ETNDAGVLTVCS 293
D+ + CS
Sbjct: 158 SLLDSFAMVQCS 169
>SB_18309| Best HMM Match : Exo_endo_phos (HMM E-Value=2.3e-09)
Length = 895
Score = 32.3 bits (70), Expect = 0.83
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 224 CSVCLVQKPRGSNDRLVECRDCSNKAHISCL 254
C +C QKP SN R ++C +C H C+
Sbjct: 107 CGIC--QKPTRSNQRAIQCDECDMWYHTKCI 135
>SB_52564| Best HMM Match : Exo_endo_phos (HMM E-Value=3.2e-09)
Length = 748
Score = 32.3 bits (70), Expect = 0.83
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 224 CSVCLVQKPRGSNDRLVECRDCSNKAHISCL 254
C +C QKP SN R ++C +C H C+
Sbjct: 10 CGIC--QKPTRSNQRAIQCDECDMWYHTKCI 38
>SB_9777| Best HMM Match : PHD (HMM E-Value=0.066)
Length = 203
Score = 32.3 bits (70), Expect = 0.83
Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Query: 224 CSVCLVQKPRGSNDRLVECRDCSNKAHISCLQSGSNILKPRPDNT--WQCPHCKTCVICC 281
C +C KP N R ++C C +HI CL + I +++ W+C C
Sbjct: 100 CGIC--SKPVRINQRGIQCDFCDIWSHIRCLNMNTIIYDALANSSCVWECCACGMPNFSS 157
Query: 282 ETNDAGVLTVCS 293
D+ + CS
Sbjct: 158 SLLDSFAMVQCS 169
>SB_6967| Best HMM Match : PHD (HMM E-Value=1.2e-08)
Length = 410
Score = 32.3 bits (70), Expect = 0.83
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 224 CSVCLVQKPRGSNDRLVECRDCSNKAHISCL 254
C +C QKP SN R ++C +C H C+
Sbjct: 107 CGIC--QKPTRSNQRAIQCDECDMWYHTKCI 135
>SB_2883| Best HMM Match : Exo_endo_phos (HMM E-Value=2.1e-09)
Length = 598
Score = 32.3 bits (70), Expect = 0.83
Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Query: 224 CSVCLVQKPRGSNDRLVECRDCSNKAHISCLQSGSNILKPRPDNT--WQCPHCKTCVICC 281
C +C KP N R ++C C +HI CL + I +++ W+C C
Sbjct: 97 CGIC--SKPVRINQRGIQCDFCDIWSHIRCLNMNTIIYDALANSSCVWECCACGMPNFSS 154
Query: 282 ETNDAGVLTVCS 293
D+ + CS
Sbjct: 155 SLLDSFAMVQCS 166
>SB_39703| Best HMM Match : PHD (HMM E-Value=9.3e-12)
Length = 886
Score = 31.9 bits (69), Expect = 1.1
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Query: 225 SVCLVQKPRGSNDRLVECR--DCSNK--AHISCLQSGSNILKPRPDNTWQCPHCK 275
++C+ + DRL+EC +CSN H+ CL G + TW C C+
Sbjct: 497 TICICNEKATMTDRLIECHNVNCSNGNFFHLKCL--GLKRMPNNSKTTWLCNICR 549
Score = 29.5 bits (63), Expect = 5.9
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
Query: 236 NDRLVECR--DCS-NKAHISCLQSGSNILKPRPDNTWQCPHC 274
ND +V C DC + H CL S N+ P+ W CPHC
Sbjct: 432 NDDIVSCTNADCPYGQFHTKCL-SLHNVKMPKQ---WYCPHC 469
>SB_25624| Best HMM Match : PHD (HMM E-Value=1.3e-17)
Length = 1828
Score = 31.9 bits (69), Expect = 1.1
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Query: 225 SVCLVQKPRGSNDRLVECR--DCSNK--AHISCLQSGSNILKPRPDNTWQCPHCK 275
++C+ + DRL+EC +CSN H+ CL G + TW C C+
Sbjct: 928 TICICNEKATMTDRLIECHNVNCSNGNFFHLKCL--GLKRMPNNSKTTWLCNICR 980
Score = 29.5 bits (63), Expect = 5.9
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
Query: 236 NDRLVECR--DCS-NKAHISCLQSGSNILKPRPDNTWQCPHC 274
ND +V C DC + H CL S N+ P+ W CPHC
Sbjct: 863 NDDIVSCTNADCPYGQFHTKCL-SLHNVKMPKQ---WYCPHC 900
Score = 29.5 bits (63), Expect = 5.9
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
Query: 236 NDRLVECR--DCS-NKAHISCLQSGSNILKPRPDNTWQCPHC 274
ND +V C DC + H CL S N+ P+ W CPHC
Sbjct: 1597 NDDIVSCTNADCPYGQFHTKCL-SLHNVKMPKQ---WYCPHC 1634
>SB_46020| Best HMM Match : PHD (HMM E-Value=9.3e-12)
Length = 824
Score = 31.9 bits (69), Expect = 1.1
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Query: 225 SVCLVQKPRGSNDRLVECR--DCSNK--AHISCLQSGSNILKPRPDNTWQCPHCK 275
++C+ + DRL+EC +CSN H+ CL G + TW C C+
Sbjct: 538 TICICNEKATMTDRLIECHNVNCSNGNFFHLKCL--GLKRMPNNSKTTWLCNICR 590
Score = 29.5 bits (63), Expect = 5.9
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 7/42 (16%)
Query: 236 NDRLVECR--DCS-NKAHISCLQSGSNILKPRPDNTWQCPHC 274
ND +V C DC + H CL S N+ P+ W CPHC
Sbjct: 473 NDDIVSCTNADCPYGQFHTKCL-SLHNVKMPKQ---WYCPHC 510
>SB_53804| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 31.5 bits (68), Expect = 1.5
Identities = 20/75 (26%), Positives = 29/75 (38%), Gaps = 7/75 (9%)
Query: 235 SNDRLVECRDCSNKAHISCLQSGSNILKPRPDNTWQCPHCKTCVICCETNDAGVLTVCSV 294
+ + L+ C +C H+SCL L P W C C T + T+C
Sbjct: 115 TKNELLLCDNCDRGYHMSCLDPK---LTKAPKGAWHCVLCSTGI---PPQSPLTSTICEE 168
Query: 295 CSDAYHALCHAPQIP 309
++ YH H P P
Sbjct: 169 TTE-YHPEQHTPLPP 182
>SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2529
Score = 31.5 bits (68), Expect = 1.5
Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Query: 224 CSVCLVQKPRGSNDRLVECRDCSNKAHISCLQSGSNILK--PRPDNTWQCPHC 274
C C KP SN + C C HI CL+ +I + TW C +C
Sbjct: 786 CGCC--SKPTKSNQLAICCDGCDTWYHIKCLRMPMHIYQGLNNSHTTWICCNC 836
>SB_20715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 31.5 bits (68), Expect = 1.5
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 8/60 (13%)
Query: 227 CLVQKPRGSNDRLVECRDCSNKA---HISCLQSGSNILKPRPDNTWQCPHCKTCVICCET 283
C+ Q+P D ++ C + S K H +C++ LK P W C CK ET
Sbjct: 520 CVCQQPECEGDEMIGCDNPSCKYKWFHFTCIK-----LKRAPKGGWYCKFCKKTTSKAET 574
>SB_9457| Best HMM Match : PHD (HMM E-Value=3.3e-08)
Length = 344
Score = 31.5 bits (68), Expect = 1.5
Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 8/80 (10%)
Query: 276 TCVICCETND---AGVLTVCSVCSDAYHALCHAPQIPDRLKAWD---QWECNNCLES-RP 328
+C +C + + L C C YH CH P++ D A D W C C++ R
Sbjct: 165 SCSVCDHSENKMTGNKLVECHECHSHYHQKCHEPRVSDE-DANDLRLVWYCTLCIKKMRE 223
Query: 329 TVIGSPAIIPRSFDYSGQNS 348
+ A+ R D NS
Sbjct: 224 ATSSTTALKNRQPDAPPSNS 243
Score = 30.7 bits (66), Expect = 2.5
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 221 GGVCSVCLVQKPRGSNDRLVECRDCSNKAHISC 253
G CSVC + + + ++LVEC +C + H C
Sbjct: 163 GVSCSVCDHSENKMTGNKLVECHECHSHYHQKC 195
>SB_35730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 31.1 bits (67), Expect = 1.9
Identities = 24/140 (17%), Positives = 55/140 (39%)
Query: 1 MSAAIATSERRIITSAIATLIYQDQSYLENGIAFDDLIKAASDQESKYSKKQLENIVNKE 60
++ A+A + + A+A I S + ++ ++S S + + +
Sbjct: 22 IAVAVAVAIAIAVAVAVAVAIAVSSSSSRSSSNSNNSSNSSSSSSSSSNSSSSSSSSSSS 81
Query: 61 LSSGSLVKLPNGNLALGPADHDVDSSDSFRFESNADSNTKMTSSANSSCRSSPQXXXXXX 120
SS S + + + + SS S S++ S++ +SS++SS SS
Sbjct: 82 SSSSSSSSNSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 141
Query: 121 XXXXXXXXXXHSNNTTRSTA 140
S++++ S++
Sbjct: 142 SSSSSSSSSSSSSSSSSSSS 161
Score = 30.7 bits (66), Expect = 2.5
Identities = 25/140 (17%), Positives = 54/140 (38%)
Query: 1 MSAAIATSERRIITSAIATLIYQDQSYLENGIAFDDLIKAASDQESKYSKKQLENIVNKE 60
++ AIA + + AIA +S + + + ++S S S + +
Sbjct: 26 VAVAIAIAVAVAVAVAIAVSSSSSRSSSNSNNSSNSSSSSSSSSNSSSSSSSSSSSSSSS 85
Query: 61 LSSGSLVKLPNGNLALGPADHDVDSSDSFRFESNADSNTKMTSSANSSCRSSPQXXXXXX 120
SS + + + + + SS S S++ S++ +SS++SS SS
Sbjct: 86 SSSSNSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 145
Query: 121 XXXXXXXXXXHSNNTTRSTA 140
S++++ S +
Sbjct: 146 SSSSSSSSSSSSSSSSSSNS 165
Score = 30.3 bits (65), Expect = 3.4
Identities = 24/140 (17%), Positives = 53/140 (37%)
Query: 1 MSAAIATSERRIITSAIATLIYQDQSYLENGIAFDDLIKAASDQESKYSKKQLENIVNKE 60
++ A+A + + A+A + S + ++S S S + +
Sbjct: 24 VAVAVAIAIAVAVAVAVAIAVSSSSSRSSSNSNNSSNSSSSSSSSSNSSSSSSSSSSSSS 83
Query: 61 LSSGSLVKLPNGNLALGPADHDVDSSDSFRFESNADSNTKMTSSANSSCRSSPQXXXXXX 120
SS S + + + + SS S S++ S++ +SS++SS SS
Sbjct: 84 SSSSSSNSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 143
Query: 121 XXXXXXXXXXHSNNTTRSTA 140
S++++ S++
Sbjct: 144 SSSSSSSSSSSSSSSSSSSS 163
>SB_25392| Best HMM Match : PHD (HMM E-Value=0.0062)
Length = 485
Score = 31.1 bits (67), Expect = 1.9
Identities = 25/84 (29%), Positives = 33/84 (39%), Gaps = 14/84 (16%)
Query: 271 CPHCKTCVICCETNDAGVLTVCSVCSDAYHALCHAPQIPD----RLKAWDQWECNNCLES 326
CP C V C + VC+ C D HA C + + R + W C+NCL S
Sbjct: 298 CPVCDKAVKCNQKR-----YVCATCKDTTHARCASISGLNIKTFRSDSPRSWTCSNCLLS 352
Query: 327 RPTVIGSPAIIPRSFDYSGQNSPN 350
G RS + SG + N
Sbjct: 353 EMQFFGQ-----RSLNTSGLSDGN 371
>SB_8023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 31.1 bits (67), Expect = 1.9
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Query: 262 KPRPDNTWQCPHCKTCVICCET-NDAGVLTVCSVCSDAYHALCHAPQIPDR-LKAWD--Q 317
KP+ NT + + + C C +T +C +C HALC I + ++A D
Sbjct: 175 KPKRSNT-KTSYDRVCYQCDKTVRQNHKRFICELCKGLTHALCEVSVIISKSIRARDPRS 233
Query: 318 WECNNCLES 326
W C C+ S
Sbjct: 234 WTCPRCILS 242
>SB_52616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1855
Score = 31.1 bits (67), Expect = 1.9
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Query: 224 CSVCLVQKPRGSNDRLVECRDCSNKAHISCL-QSGSNILKPRPDN--TWQCPHC 274
C +C KP SN + ++C C + H C+ S + K D+ W C +C
Sbjct: 935 CGLC--NKPTKSNQKAIQCDGCYHWFHAKCVSMSAQSYEKFGNDSKLVWMCNYC 986
>SB_33821| Best HMM Match : zf-MIZ (HMM E-Value=1.3e-29)
Length = 1202
Score = 31.1 bits (67), Expect = 1.9
Identities = 28/116 (24%), Positives = 55/116 (47%), Gaps = 17/116 (14%)
Query: 169 RP-VGSLNKSTIKKRLMVAGH----IKDDAPLSESQFSLDGSGDEIDQEDSLPHEESGGV 223
RP V S+ +S ++KRL+ A H +K + L + + +GS D ++Q ++ +
Sbjct: 875 RPSVSSVLQSLLRKRLLPAEHCITKVKRNFSLCSTAPTTNGSDDGVEQT-AIKVSLKCPI 933
Query: 224 CSVCLVQKPRGSNDRLVECRDCSNKAHISCLQSGSNILKPRPDNTWQCPHCKTCVI 279
+ RG + + ++C D + ++C + GS W+CP C +C +
Sbjct: 934 TFRRISLPARGHDCKHIQCFDLESYLRLNC-ERGS----------WKCPVCNSCEV 978
>SB_44732| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 675
Score = 30.7 bits (66), Expect = 2.5
Identities = 20/73 (27%), Positives = 26/73 (35%)
Query: 220 SGGVCSVCLVQKPRGSNDRLVECRDCSNKAHISCLQSGSNILKPRPDNTWQCPHCKTCVI 279
+ G S C V RG+ RLVEC + S S RP W C +
Sbjct: 315 NAGQWSQCSVTCGRGNIRRLVECVPTGSNCEARYRPSDSRPCLMRPCAEWNVGAWSQCSV 374
Query: 280 CCETNDAGVLTVC 292
C + A +C
Sbjct: 375 TCGSGKASRQVLC 387
>SB_40804| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1044
Score = 30.7 bits (66), Expect = 2.5
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Query: 224 CSVCLVQKPRGSNDRLVECRDCSNKAHISCLQSGSNILKPRPDNTWQCP 272
C C KP SN V+C C H S S SN P D++ P
Sbjct: 95 CGFC--SKPVKSNQMGVQCDSCDKWYHSSSFLSSSNSFDPLSDSSLNYP 141
>SB_36259| Best HMM Match : PHD (HMM E-Value=5.3e-05)
Length = 790
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 224 CSVCLVQKPRGSNDRLVECRDCSNKAHISCLQSGSNILKPRPDNT--WQCPHC 274
C +C +KP SN R ++C C+ H C+ + +++ W CP C
Sbjct: 94 CGLC--KKPVKSNQRGLQCDSCNIWNHAKCMDISIPSYESLANSSCLWLCPKC 144
>SB_22901| Best HMM Match : PHD (HMM E-Value=5.3e-05)
Length = 696
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 224 CSVCLVQKPRGSNDRLVECRDCSNKAHISCLQSGSNILKPRPDNT--WQCPHC 274
C +C +KP SN R ++C C+ H C+ + +++ W CP C
Sbjct: 98 CGLC--KKPVKSNQRGLQCDSCNIWNHAKCMDISIPSYESLANSSCLWLCPKC 148
>SB_21083| Best HMM Match : PHD (HMM E-Value=5.3e-05)
Length = 822
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 224 CSVCLVQKPRGSNDRLVECRDCSNKAHISCLQSGSNILKPRPDNT--WQCPHC 274
C +C +KP SN R ++C C+ H C+ + +++ W CP C
Sbjct: 98 CGLC--KKPVKSNQRGLQCDSCNIWNHAKCMDISIPSYESLANSSCLWLCPKC 148
>SB_21010| Best HMM Match : PHD (HMM E-Value=7e-10)
Length = 389
Score = 30.7 bits (66), Expect = 2.5
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Query: 237 DRLVECRDCSNKAHISCLQSGSNILKPRPDNTWQCPHCK 275
D+L+ C DC H+ CL + KP P+ W C C+
Sbjct: 333 DQLLFCDDCDRGYHMYCLNPPMD--KP-PEGHWMCSLCR 368
>SB_7292| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1126
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 224 CSVCLVQKPRGSNDRLVECRDCSNKAHISCLQSGSNILKPRPDNT--WQCPHC 274
C +C +KP SN R ++C C+ H C+ + +++ W CP C
Sbjct: 80 CGLC--KKPVKSNQRGLQCDSCNIWNHAKCMDISIPSYESLANSSCLWLCPKC 130
>SB_3579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Query: 280 CCETNDAGVLTVCSVCSDAYHALCHAPQIPDRLKAWDQWECNNCLES 326
C E +G L +C C+ YH C P P W C C E+
Sbjct: 187 CSECKASGELLMCDTCTLVYHLSCLDP--PLTTIPTGMWICPKCKET 231
Score = 30.3 bits (65), Expect = 3.4
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 14/66 (21%)
Query: 210 DQEDSLPHEESGGVCSVCLVQKPRGSNDRLVECRDCSNKAHISCLQSGSNILKPRPDNTW 269
D++D HE++ CS C K G L+ C C+ H+SCL + P W
Sbjct: 178 DEDDD--HEDA---CSEC---KASGE---LLMCDTCTLVYHLSCLDPPLTTI---PTGMW 223
Query: 270 QCPHCK 275
CP CK
Sbjct: 224 ICPKCK 229
>SB_39447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2123
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 224 CSVCLVQKPRGSNDRLVECRDCSNKAHISCLQSGSNILKPRPDNT--WQCPHC 274
C +C +KP SN R ++C C+ H C+ + +++ W CP C
Sbjct: 1245 CGLC--KKPVKSNQRGLQCDSCNIWNHAKCMDISIPSYESLANSSCLWLCPKC 1295
>SB_33045| Best HMM Match : RVT_1 (HMM E-Value=3.4e-18)
Length = 1061
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 224 CSVCLVQKPRGSNDRLVECRDCSNKAHISCLQSGSNILKPRPDNT--WQCPHC 274
C +C +KP SN R ++C C+ H C+ + +++ W CP C
Sbjct: 166 CGLC--KKPVKSNQRGLQCDSCNIWNHAKCMDISIPSYESLANSSCLWLCPKC 216
>SB_24847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 913
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 224 CSVCLVQKPRGSNDRLVECRDCSNKAHISCLQSGSNILKPRPDNT--WQCPHC 274
C +C +KP SN R ++C C+ H C+ + +++ W CP C
Sbjct: 77 CGLC--KKPVKSNQRGLQCDSCNIWNHAKCMDISIPSYESLANSSCLWLCPKC 127
>SB_10962| Best HMM Match : PHD (HMM E-Value=5.3e-05)
Length = 521
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 224 CSVCLVQKPRGSNDRLVECRDCSNKAHISCLQSGSNILKPRPDNT--WQCPHC 274
C +C +KP SN R ++C C+ H C+ + +++ W CP C
Sbjct: 98 CGLC--KKPVKSNQRGLQCDSCNIWNHAKCMDISIPSYESLANSSCLWLCPKC 148
>SB_6377| Best HMM Match : Exo_endo_phos (HMM E-Value=6.5e-10)
Length = 450
Score = 30.7 bits (66), Expect = 2.5
Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 4/72 (5%)
Query: 224 CSVCLVQKPRGSNDRLVECRDCSNKAHISCLQSGSNILKPRPDNT--WQCPHCKTCVICC 281
C +C KP N R ++C C +HI CL + I +++ W C C
Sbjct: 100 CGIC--SKPVRINQRGIQCDFCDIWSHIRCLNMNTIIYDALANSSCVWVCCACGMPNFSS 157
Query: 282 ETNDAGVLTVCS 293
D+ + CS
Sbjct: 158 SLLDSFAMVQCS 169
>SB_55826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1199
Score = 30.3 bits (65), Expect = 3.4
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Query: 299 YHALCHAPQIPDRLKAWDQ-WECNNC 323
YH LCH P IP + D+ W C C
Sbjct: 44 YHQLCHDPSIPAKAVEPDEPWMCRYC 69
>SB_7039| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 577
Score = 30.3 bits (65), Expect = 3.4
Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Query: 216 PHEESGGVCSVCLVQKPRGSNDRLVECRDCSNKAHISCLQSGSNILKPRPDNTWQCPHC 274
P ES +C VC Q+PR + C +++ I CL+ I CP C
Sbjct: 71 PSGESCVICPVCYAQRPR---SLFPDISTCEHRSCIECLRQYMTIEINESRVNLTCPEC 126
>SB_54400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 723
Score = 30.3 bits (65), Expect = 3.4
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 5/54 (9%)
Query: 224 CSVCLVQKPRGSNDRLVECRDCSNKAHISCLQSGSNILKPRPDN---TWQCPHC 274
C VC KP SN +EC C H C+ + + +N TW C C
Sbjct: 18 CGVCA--KPVKSNQAGIECEQCLLWYHKKCIYQTTKSYEALQNNSKLTWICSSC 69
>SB_37260| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 818
Score = 30.3 bits (65), Expect = 3.4
Identities = 29/90 (32%), Positives = 36/90 (40%), Gaps = 3/90 (3%)
Query: 140 AVRVGERRKMAKKVFDPSDNNVPSKRKRGRPVGSLNKSTIKKRLMVAGHIKDDAPLSESQ 199
A R G +R+ + V DPS VP K + N S + G DD+ S+
Sbjct: 295 ANRAGHKREFIEPVLDPSPLKVP-KLAASFFMEKTNMSYNNHDRVDEGIEDDDSDDSDDD 353
Query: 200 FSLDGSGDEIDQEDSLPHEESGG--VCSVC 227
S D E ED P SG VCS C
Sbjct: 354 DSDDDDDSEDVDEDMHPPVLSGKKYVCSTC 383
>SB_29231| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2271
Score = 29.9 bits (64), Expect = 4.5
Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Query: 223 VCSVCLVQKPRGSNDRLVECRDCSNKAHISCLQSGSNILKPRPDNTWQCPHCKTCV 278
+C VC K S + +EC +C H C++ + K N C TC+
Sbjct: 1455 LCGVC--GKGCRSTQKAIECEECEKWFHAKCVRISNMEFKDYAKNPSLYWACSTCI 1508
>SB_54962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2211
Score = 29.9 bits (64), Expect = 4.5
Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Query: 223 VCSVCLVQKPRGSNDRLVECRDCSNKAHISCLQSGSNILKPRPDNTWQCPHCKTCV 278
+C VC K S + +EC +C H C++ + K N C TC+
Sbjct: 105 LCGVC--GKGCRSTQKAIECEECEKWFHAKCVRISNMEFKDYAKNPSLYWACSTCI 158
>SB_31839| Best HMM Match : Exo_endo_phos (HMM E-Value=1.3e-11)
Length = 887
Score = 29.9 bits (64), Expect = 4.5
Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Query: 223 VCSVCLVQKPRGSNDRLVECRDCSNKAHISCLQSGSNILKPRPDNTWQCPHCKTCV 278
+C VC K S + +EC +C H C++ + K N C TC+
Sbjct: 115 LCGVC--GKGCRSTQKAIECEECEKWFHAKCVRISNMEFKDYAKNPSLYWACSTCI 168
>SB_1597| Best HMM Match : PHD (HMM E-Value=1.4e-05)
Length = 763
Score = 29.9 bits (64), Expect = 4.5
Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Query: 223 VCSVCLVQKPRGSNDRLVECRDCSNKAHISCLQSGSNILKPRPDNTWQCPHCKTCV 278
+C VC K S + +EC +C H C++ + K N C TC+
Sbjct: 690 LCGVC--GKGCRSTQKAIECEECEKWFHAKCVRISNMEFKDYAKNPSLYWACSTCI 743
>SB_19393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1660
Score = 29.5 bits (63), Expect = 5.9
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 144 GERRKMAKKVFDPSDNNVPSKRKRGRPVGSLNKSTIKKRLMVAGHIKDDAPLSESQFSLD 203
G ++ +KK D S ++ +R + + N+ + R ++GH + AP Q +
Sbjct: 1531 GYPKQDSKKKADTSPSSRTDERTKNFMTSAGNQLD-EGRPRISGHAVN-APRDSGQGGIL 1588
Query: 204 GSGDEIDQEDSLPHEESGGVCS 225
+G+E D P +E G VC+
Sbjct: 1589 KTGNETQLSDGRPVKEKGSVCN 1610
>SB_43994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 403
Score = 29.5 bits (63), Expect = 5.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 156 PSDNNVPSKRKRGRPVGSLNKSTIKKRLMVAGH 188
P + + P+K KRGRP GS NK R + H
Sbjct: 324 PQEPSDPNKPKRGRPKGSKNKPKDPLRFTGSSH 356
>SB_9001| Best HMM Match : PHD (HMM E-Value=0.00096)
Length = 345
Score = 29.5 bits (63), Expect = 5.9
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 228 LVQKPRGSNDRLVECRDCSNKAHISCLQSGSNILKPRPDNT--WQCPHC 274
L +KP SN R ++C C+ H C+ + +++ W CP C
Sbjct: 100 LCKKPVKSNQRGLQCDSCNIWNHAKCMDISIPSYESLANSSCLWLCPKC 148
>SB_6668| Best HMM Match : PHD (HMM E-Value=0.00096)
Length = 210
Score = 29.5 bits (63), Expect = 5.9
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 228 LVQKPRGSNDRLVECRDCSNKAHISCLQSGSNILKPRPDNT--WQCPHC 274
L +KP SN R ++C C+ H C+ + +++ W CP C
Sbjct: 100 LCKKPVKSNQRGLQCDSCNIWNHAKCMDISIPSYESLANSSCLWLCPKC 148
>SB_21040| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 29.1 bits (62), Expect = 7.8
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 42 SDQESKYSKKQLENIVNKELSSGSLVKLPNGNLALGPADHDVDSSDSFRFESN 94
S+Q+ K+S K +ENIV K + S K G AL D ++SD F+S+
Sbjct: 41 SEQKQKFSTKTVENIV-KHGEATSTEKATRGVAALEECDGQ-EASDEDEFKSD 91
>SB_19322| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4994
Score = 29.1 bits (62), Expect = 7.8
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 354 FLKPHELDRAPSKLSMDTPIDPSIPDITHWNTDDVFEY 391
++ H+L + SKL +D I P I + +WN+ ++ Y
Sbjct: 739 YMNRHQLKKTSSKLKVDAAISPGI-TMLNWNSLNIENY 775
>SB_15137| Best HMM Match : SRCR (HMM E-Value=4.9e-28)
Length = 327
Score = 29.1 bits (62), Expect = 7.8
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 84 DSSDSFRFESNADSNTK-MTSSANSSCRSSPQXXXXXXXXXXXXXXXXHSNNTTRS 138
+S++S R +N+ SN+ TS++N+S +S +SNN+TR+
Sbjct: 146 NSNNSTRNNNNSTSNSNNSTSNSNNSTSNSNNSSNNNNSTSNSNNSTSNSNNSTRN 201
>SB_13533| Best HMM Match : C1_4 (HMM E-Value=0.66)
Length = 146
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Query: 265 PDNTWQCPHCKTCVICCETNDAGVLTVCSVCSDAYHALCHAPQI 308
PD CP C C C N V ++C +CS + P I
Sbjct: 93 PDVWSMCPMCGQCARCV-VNVPDVWSMCPMCSQCARCVARLPLI 135
>SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43)
Length = 1806
Score = 29.1 bits (62), Expect = 7.8
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 142 RVGERRKMAKKVFDPSDNNVPSKRKRGRPVGSLNKSTIKKRLMVAGHIKDDAPLSES 198
R K+AKK S N SK + G P KST K R + D+P+ ES
Sbjct: 1354 RKRREEKLAKKESSKSSNKRKSKERSGNPSFKRIKSTTKGR---ETEVTKDSPVVES 1407
>SB_45285| Best HMM Match : AT_hook (HMM E-Value=0.13)
Length = 440
Score = 29.1 bits (62), Expect = 7.8
Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 3/92 (3%)
Query: 79 ADHDVDSSDSFRFESNADSNTKMTSSANSSCRSSPQXXXXXXXXXXXXXXXXHSNNTTRS 138
+D D D SD ++ S+ S+ S S+P +N+ +
Sbjct: 276 SDDDSDISDVSSVHTSDLSSFDEDLSSESDNESTPGAKEESMPQDRSKPRTNKTNDIKKQ 335
Query: 139 TAVRVGERRKMAKKVFDPSDNNVPSKRKRGRP 170
GE K++K PS ++ KR+RGRP
Sbjct: 336 AH---GEMNKVSKHATKPSGDSDSLKRRRGRP 364
>SB_40323| Best HMM Match : zf-C3HC4 (HMM E-Value=0.42)
Length = 495
Score = 29.1 bits (62), Expect = 7.8
Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Query: 276 TCVICCETNDAGVLTVCSVCSDAYHALC 303
TCV+CCE +D ++ + C H +C
Sbjct: 12 TCVVCCEVDDE-LMELLPCCKQPCHYIC 38
>SB_28309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 29.1 bits (62), Expect = 7.8
Identities = 11/36 (30%), Positives = 24/36 (66%)
Query: 134 NTTRSTAVRVGERRKMAKKVFDPSDNNVPSKRKRGR 169
+T ++ +R+GE+ K+ + DP+ N+P+ R+R +
Sbjct: 454 STIKTMDIRLGEKDKVECYLEDPTSENLPTFRERAK 489
>SB_12852| Best HMM Match : Mic1 (HMM E-Value=0.32)
Length = 1077
Score = 29.1 bits (62), Expect = 7.8
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 3 AAIATSERRIITSAIATLIYQDQSYLENGIAFDDLIKAASDQESKYSKKQLENIVNKELS 62
A++AT + T+ IA + Q +E+G+ DD+ A ++ SK S+K + N+ K +
Sbjct: 821 ASVATGQG---TNVIAQGVKQTSKVIESGV--DDVGSAVANGASKASRKTVSNVAFKAAA 875
Query: 63 SGSLV 67
V
Sbjct: 876 KAGAV 880
>SB_6963| Best HMM Match : PHD (HMM E-Value=0.054)
Length = 146
Score = 29.1 bits (62), Expect = 7.8
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 5/48 (10%)
Query: 256 SGSNILKPRPDNTWQCPHCKTCVICCETNDAGVLTVCSVCSDAYHALC 303
SG L P P + C C VIC N G+ C C YH C
Sbjct: 82 SGDIPLNPGPTYRYPCGACSKPVIC---NQKGI--QCDYCDAWYHTKC 124
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.130 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,021,111
Number of Sequences: 59808
Number of extensions: 749254
Number of successful extensions: 2413
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 2319
Number of HSP's gapped (non-prelim): 131
length of query: 454
length of database: 16,821,457
effective HSP length: 84
effective length of query: 370
effective length of database: 11,797,585
effective search space: 4365106450
effective search space used: 4365106450
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 62 (29.1 bits)
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