GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000414-TA|BGIBMGA000414-PA|IPR000637|HMG-I and HMG-Y,
DNA-binding, IPR001965|Zinc finger, PHD-type, IPR011011|Zinc finger,
FYVE/PHD-type, IPR010993|Sterile alpha motif homology
         (454 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    26   2.4  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    26   2.4  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   4.2  
AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.    25   5.6  
AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    25   5.6  
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    24   9.8  

>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 25.8 bits (54), Expect = 2.4
 Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)

Query: 78  PADHDVDSSDSFRFESNADSNTKMTSSANSSCRSSPQ 114
           PA+   DSS S    S++DS++  +SS++SS  SS +
Sbjct: 358 PANETDDSSSS-SSSSSSDSDSDSSSSSDSSSSSSEE 393


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 25.8 bits (54), Expect = 2.4
 Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)

Query: 78  PADHDVDSSDSFRFESNADSNTKMTSSANSSCRSSPQ 114
           PA+   DSS S    S++DS++  +SS++SS  SS +
Sbjct: 358 PANETDDSSSS-SSSSSSDSDSDSSSSSDSSSSSSEE 393


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 25.0 bits (52), Expect = 4.2
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 73  NLALGPADHDVDSSDSFRFESNADSNTKMTSSANSSCRS 111
           N A+   +H+   SD +R  + AD+ T +  ++  +C S
Sbjct: 562 NYAVETIEHNAQVSDHYRHRAYADTVTGLHETSGYTCIS 600


>AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.
          Length = 332

 Score = 24.6 bits (51), Expect = 5.6
 Identities = 11/23 (47%), Positives = 14/23 (60%)

Query: 191 DDAPLSESQFSLDGSGDEIDQED 213
           +D     SQ S DGS D +D+ED
Sbjct: 35  NDGSFEASQKSSDGSLDPLDEED 57


>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 24.6 bits (51), Expect = 5.6
 Identities = 10/32 (31%), Positives = 19/32 (59%)

Query: 190 KDDAPLSESQFSLDGSGDEIDQEDSLPHEESG 221
           K +AP+ +++  L  +GDE+ ++   P  E G
Sbjct: 42  KPEAPVDDAEQPLPPNGDELPEDAPEPVPEDG 73


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
           protein.
          Length = 1322

 Score = 23.8 bits (49), Expect = 9.8
 Identities = 16/53 (30%), Positives = 20/53 (37%), Gaps = 6/53 (11%)

Query: 329 TVIGSPAIIPRSFDYSGQNSPNVDPFLKPH------ELDRAPSKLSMDTPIDP 375
           T   SPA  P      G N P+  P + PH           P+  +  TP DP
Sbjct: 676 TTTASPAPAPAIRSRFGDNRPSWRPLIVPHATTTKTPTTTPPATTTSTTPRDP 728


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.315    0.130    0.396 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 484,595
Number of Sequences: 2123
Number of extensions: 21642
Number of successful extensions: 36
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 32
Number of HSP's gapped (non-prelim): 9
length of query: 454
length of database: 516,269
effective HSP length: 66
effective length of query: 388
effective length of database: 376,151
effective search space: 145946588
effective search space used: 145946588
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 49 (23.8 bits)