BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA000413-TA|BGIBMGA000413-PA|undefined (216 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_45041| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7 SB_11292| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7 SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08) 29 3.0 SB_55629| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0 SB_6832| Best HMM Match : HLH (HMM E-Value=2.4e-14) 29 3.9 SB_50789| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2 SB_24403| Best HMM Match : BRF1 (HMM E-Value=1.2) 28 5.2 SB_10921| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2 SB_28844| Best HMM Match : SpoVT_AbrB (HMM E-Value=4.7) 28 6.8 SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8 SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 27 9.0 SB_4922| Best HMM Match : CXC (HMM E-Value=0.013) 27 9.0 >SB_45041| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1278 Score = 29.9 bits (64), Expect = 1.7 Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 151 QDETWINEGHAPKKAWIDQTVSSSRQAFLDGLTTG-LKQPLGKGKRLIISH 200 Q E W+ EG + +++ + + +AFL ++ G + + + KG RL I H Sbjct: 307 QLEVWVKEGKLKNRETVEEGLENVAKAFLSMMSGGNIGKQVVKGARLWIPH 357 >SB_11292| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1529 Score = 29.9 bits (64), Expect = 1.7 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 2/68 (2%) Query: 9 CYIVPYKRYGSSTKHV--KPNLSPRKKRTRIALSVTEKVMIQNVYKHVFEEKAASLLPIE 66 C+++ + Y + KH+ K N++ R A V +HV E A +PIE Sbjct: 1220 CWVMRLQPYNFTVKHIPGKENIADSLSRLTGAKGVCINTDADEYIRHVAEMAAPVAIPIE 1279 Query: 67 APEKKECV 74 E++ V Sbjct: 1280 EIERESAV 1287 >SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08) Length = 839 Score = 29.1 bits (62), Expect = 3.0 Identities = 19/75 (25%), Positives = 33/75 (44%) Query: 133 SDTFEKLKSIERKEGIYYQDETWINEGHAPKKAWIDQTVSSSRQAFLDGLTTGLKQPLGK 192 +D FEKL+ I G Q E A K+ V A LD ++ + + Sbjct: 71 ADAFEKLRGIAEARGELRQFRRVTREATAIKEPSYQPLVKQVTLATLDSISVEVLSNQVQ 130 Query: 193 GKRLIISHIGGEEGL 207 G++++ + + GE+ L Sbjct: 131 GEKVLTNQVQGEKVL 145 >SB_55629| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 322 Score = 29.1 bits (62), Expect = 3.0 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 7/77 (9%) Query: 11 IVPYKRYGSSTKHVKPNLSPRKKR-TRIALSVTEKVMIQNVYKHVFEEKAASLLPIEAPE 69 +VP YG S K+ + +L +KK TR + +K QN + +F+ L +A Sbjct: 249 LVPTLEYGQSLKYTEKDLLDKKKNDTRDEKAFRDKQKTQNANQTLFK------LAQQAQL 302 Query: 70 KKECVSKTADISGIGVT 86 K +S A + G G T Sbjct: 303 YKAKLSTDASLDGTGAT 319 >SB_6832| Best HMM Match : HLH (HMM E-Value=2.4e-14) Length = 189 Score = 28.7 bits (61), Expect = 3.9 Identities = 18/98 (18%), Positives = 45/98 (45%), Gaps = 3/98 (3%) Query: 26 PNLSPRKKRTRIALSVTEKVMIQNVYKHVFEEKAASLLPIEAPEKKECVSKTADISGIGV 85 P L+ ++ R+A + E+ +Q + ++ ++ L+P+ EKK ++T ++ + + Sbjct: 55 PRLTGVSRQRRLA-NTRERHRVQVLNAYI--DRLRHLIPLFPGEKKPSKTETVHLAALYI 111 Query: 86 TSVYSVLKEHKENEQFKSPEKRGPKHSFKDKLDDFTFA 123 + +++ ++ G D DFTF+ Sbjct: 112 EHMTEIIQNTEKPPSVSDASSPGTTSDLDDLETDFTFS 149 >SB_50789| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 777 Score = 28.3 bits (60), Expect = 5.2 Identities = 14/55 (25%), Positives = 29/55 (52%) Query: 1 MEIVVFICCYIVPYKRYGSSTKHVKPNLSPRKKRTRIALSVTEKVMIQNVYKHVF 55 + +++ I CY R ++V +L+ R +R+ + LSV E + + ++ VF Sbjct: 309 LPMLLIIFCYTAVSLRVRKHRRNVTSSLNVRNQRSELRLSVEEVKITRTLFTLVF 363 >SB_24403| Best HMM Match : BRF1 (HMM E-Value=1.2) Length = 623 Score = 28.3 bits (60), Expect = 5.2 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 66 EAPEKKECVSKTADISGIGVTSVYSVLKEHKENEQFKSP-EKRGPKHSFKDKL 117 E + EC+S+ ++ +G++SV S KE N K P PK S D L Sbjct: 242 EGSDSDECISQEDMLAKLGLSSVKSKKKESMSNGVDKRPLIPHKPKESIVDFL 294 >SB_10921| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 93 Score = 28.3 bits (60), Expect = 5.2 Identities = 9/24 (37%), Positives = 15/24 (62%) Query: 143 ERKEGIYYQDETWINEGHAPKKAW 166 E+K G + Q++ W+N H P +W Sbjct: 9 EQKNGKFSQNKVWLNFAHPPFASW 32 >SB_28844| Best HMM Match : SpoVT_AbrB (HMM E-Value=4.7) Length = 592 Score = 27.9 bits (59), Expect = 6.8 Identities = 15/66 (22%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Query: 109 PKHSFKDKLDDFTFAAIRTLFDGASDTFEKLKSIERKEGIYYQDETWINEGHAPKKAWID 168 P KD D+ ++ + DG T+E+ K ++ ++G + T + A K+ +ID Sbjct: 151 PDSFIKDNTDEQVLEILKKIGDGEEITYEQWKRVQDEDG---KHRTKLINTKASKEDFID 207 Query: 169 QTVSSS 174 + +++ Sbjct: 208 KVTAAT 213 >SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1805 Score = 27.9 bits (59), Expect = 6.8 Identities = 11/26 (42%), Positives = 17/26 (65%) Query: 86 TSVYSVLKEHKENEQFKSPEKRGPKH 111 T V ++KEH ++E+F+ PE R H Sbjct: 585 TLVEKLIKEHNKHEKFQIPEFRSQAH 610 >SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 375 Score = 27.5 bits (58), Expect = 9.0 Identities = 10/26 (38%), Positives = 18/26 (69%) Query: 11 IVPYKRYGSSTKHVKPNLSPRKKRTR 36 I+ + +ST HV+ LSPRK++++ Sbjct: 350 IIAMETENTSTSHVRQKLSPRKRKSK 375 >SB_4922| Best HMM Match : CXC (HMM E-Value=0.013) Length = 600 Score = 27.5 bits (58), Expect = 9.0 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 8/65 (12%) Query: 11 IVPYKRYGSSTKHVKPNLSPRKKRTRIALSVTEKVMIQNVYKHVFEEKAASLLPIEAPEK 70 +VPY R ST +K LS R AL VT + +N ++ S LP+ P+K Sbjct: 405 VVPYHRVKLSTSTLKDKLSMFDPRFA-ALMVTPIQVDEN-------KRLTSQLPVRTPQK 456 Query: 71 KECVS 75 K +S Sbjct: 457 KRVLS 461 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.316 0.134 0.387 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 7,334,645 Number of Sequences: 59808 Number of extensions: 304720 Number of successful extensions: 833 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 827 Number of HSP's gapped (non-prelim): 13 length of query: 216 length of database: 16,821,457 effective HSP length: 79 effective length of query: 137 effective length of database: 12,096,625 effective search space: 1657237625 effective search space used: 1657237625 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.6 bits) S2: 58 (27.5 bits)
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