GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000413-TA|BGIBMGA000413-PA|undefined
         (216 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    23   2.4  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    22   4.3  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    22   4.3  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    22   4.3  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   5.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.5  

>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/33 (27%), Positives = 16/33 (48%)

Query: 84  GVTSVYSVLKEHKENEQFKSPEKRGPKHSFKDK 116
           G T V    K H+  E + +P+K  P +   ++
Sbjct: 85  GCTVVIGTFKVHRLEEYYPNPDKFDPDNFLPER 117


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 7/20 (35%), Positives = 13/20 (65%)

Query: 139 LKSIERKEGIYYQDETWINE 158
           + S  + EG+Y+ DE + N+
Sbjct: 316 IASFTKSEGLYHLDEVYNNQ 335


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 7/20 (35%), Positives = 13/20 (65%)

Query: 139 LKSIERKEGIYYQDETWINE 158
           + S  + EG+Y+ DE + N+
Sbjct: 316 IASFTKSEGLYHLDEVYNNQ 335


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 7/20 (35%), Positives = 13/20 (65%)

Query: 139 LKSIERKEGIYYQDETWINE 158
           + S  + EG+Y+ DE + N+
Sbjct: 316 IASFTKSEGLYHLDEVYNNQ 335


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 11/49 (22%), Positives = 23/49 (46%)

Query: 45  VMIQNVYKHVFEEKAASLLPIEAPEKKECVSKTADISGIGVTSVYSVLK 93
           V  QN Y+H  EE    ++      + +C  +   I+ I + +V  +++
Sbjct: 323 VYFQNEYEHPSEEDVKRIINQPMDGEDQCDVRFRHITEITILTVQLIVE 371


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/21 (42%), Positives = 14/21 (66%)

Query: 83  IGVTSVYSVLKEHKENEQFKS 103
           I  T V+SVLK++   +Q K+
Sbjct: 351 INYTLVFSVLKQYVMQQQVKN 371


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)

Query: 96  KENEQFKSPEKRGP 109
           K+NE+  SP++R P
Sbjct: 691 KQNEKSPSPQQRSP 704


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.316    0.134    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,125
Number of Sequences: 317
Number of extensions: 2023
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 216
length of database: 114,650
effective HSP length: 54
effective length of query: 162
effective length of database: 97,532
effective search space: 15800184
effective search space used: 15800184
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 41 (20.6 bits)