Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000413-TA|BGIBMGA000413-PA|undefined
(216 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45041| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_11292| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08) 29 3.0
SB_55629| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_6832| Best HMM Match : HLH (HMM E-Value=2.4e-14) 29 3.9
SB_50789| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_24403| Best HMM Match : BRF1 (HMM E-Value=1.2) 28 5.2
SB_10921| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_28844| Best HMM Match : SpoVT_AbrB (HMM E-Value=4.7) 28 6.8
SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 27 9.0
SB_4922| Best HMM Match : CXC (HMM E-Value=0.013) 27 9.0
>SB_45041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1278
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 151 QDETWINEGHAPKKAWIDQTVSSSRQAFLDGLTTG-LKQPLGKGKRLIISH 200
Q E W+ EG + +++ + + +AFL ++ G + + + KG RL I H
Sbjct: 307 QLEVWVKEGKLKNRETVEEGLENVAKAFLSMMSGGNIGKQVVKGARLWIPH 357
>SB_11292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1529
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Query: 9 CYIVPYKRYGSSTKHV--KPNLSPRKKRTRIALSVTEKVMIQNVYKHVFEEKAASLLPIE 66
C+++ + Y + KH+ K N++ R A V +HV E A +PIE
Sbjct: 1220 CWVMRLQPYNFTVKHIPGKENIADSLSRLTGAKGVCINTDADEYIRHVAEMAAPVAIPIE 1279
Query: 67 APEKKECV 74
E++ V
Sbjct: 1280 EIERESAV 1287
>SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08)
Length = 839
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/75 (25%), Positives = 33/75 (44%)
Query: 133 SDTFEKLKSIERKEGIYYQDETWINEGHAPKKAWIDQTVSSSRQAFLDGLTTGLKQPLGK 192
+D FEKL+ I G Q E A K+ V A LD ++ + +
Sbjct: 71 ADAFEKLRGIAEARGELRQFRRVTREATAIKEPSYQPLVKQVTLATLDSISVEVLSNQVQ 130
Query: 193 GKRLIISHIGGEEGL 207
G++++ + + GE+ L
Sbjct: 131 GEKVLTNQVQGEKVL 145
>SB_55629| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 322
Score = 29.1 bits (62), Expect = 3.0
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 11 IVPYKRYGSSTKHVKPNLSPRKKR-TRIALSVTEKVMIQNVYKHVFEEKAASLLPIEAPE 69
+VP YG S K+ + +L +KK TR + +K QN + +F+ L +A
Sbjct: 249 LVPTLEYGQSLKYTEKDLLDKKKNDTRDEKAFRDKQKTQNANQTLFK------LAQQAQL 302
Query: 70 KKECVSKTADISGIGVT 86
K +S A + G G T
Sbjct: 303 YKAKLSTDASLDGTGAT 319
>SB_6832| Best HMM Match : HLH (HMM E-Value=2.4e-14)
Length = 189
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/98 (18%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Query: 26 PNLSPRKKRTRIALSVTEKVMIQNVYKHVFEEKAASLLPIEAPEKKECVSKTADISGIGV 85
P L+ ++ R+A + E+ +Q + ++ ++ L+P+ EKK ++T ++ + +
Sbjct: 55 PRLTGVSRQRRLA-NTRERHRVQVLNAYI--DRLRHLIPLFPGEKKPSKTETVHLAALYI 111
Query: 86 TSVYSVLKEHKENEQFKSPEKRGPKHSFKDKLDDFTFA 123
+ +++ ++ G D DFTF+
Sbjct: 112 EHMTEIIQNTEKPPSVSDASSPGTTSDLDDLETDFTFS 149
>SB_50789| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 777
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/55 (25%), Positives = 29/55 (52%)
Query: 1 MEIVVFICCYIVPYKRYGSSTKHVKPNLSPRKKRTRIALSVTEKVMIQNVYKHVF 55
+ +++ I CY R ++V +L+ R +R+ + LSV E + + ++ VF
Sbjct: 309 LPMLLIIFCYTAVSLRVRKHRRNVTSSLNVRNQRSELRLSVEEVKITRTLFTLVF 363
>SB_24403| Best HMM Match : BRF1 (HMM E-Value=1.2)
Length = 623
Score = 28.3 bits (60), Expect = 5.2
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 66 EAPEKKECVSKTADISGIGVTSVYSVLKEHKENEQFKSP-EKRGPKHSFKDKL 117
E + EC+S+ ++ +G++SV S KE N K P PK S D L
Sbjct: 242 EGSDSDECISQEDMLAKLGLSSVKSKKKESMSNGVDKRPLIPHKPKESIVDFL 294
>SB_10921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 28.3 bits (60), Expect = 5.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 143 ERKEGIYYQDETWINEGHAPKKAW 166
E+K G + Q++ W+N H P +W
Sbjct: 9 EQKNGKFSQNKVWLNFAHPPFASW 32
>SB_28844| Best HMM Match : SpoVT_AbrB (HMM E-Value=4.7)
Length = 592
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/66 (22%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 109 PKHSFKDKLDDFTFAAIRTLFDGASDTFEKLKSIERKEGIYYQDETWINEGHAPKKAWID 168
P KD D+ ++ + DG T+E+ K ++ ++G + T + A K+ +ID
Sbjct: 151 PDSFIKDNTDEQVLEILKKIGDGEEITYEQWKRVQDEDG---KHRTKLINTKASKEDFID 207
Query: 169 QTVSSS 174
+ +++
Sbjct: 208 KVTAAT 213
>SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1805
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 86 TSVYSVLKEHKENEQFKSPEKRGPKH 111
T V ++KEH ++E+F+ PE R H
Sbjct: 585 TLVEKLIKEHNKHEKFQIPEFRSQAH 610
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 11 IVPYKRYGSSTKHVKPNLSPRKKRTR 36
I+ + +ST HV+ LSPRK++++
Sbjct: 350 IIAMETENTSTSHVRQKLSPRKRKSK 375
>SB_4922| Best HMM Match : CXC (HMM E-Value=0.013)
Length = 600
Score = 27.5 bits (58), Expect = 9.0
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 11 IVPYKRYGSSTKHVKPNLSPRKKRTRIALSVTEKVMIQNVYKHVFEEKAASLLPIEAPEK 70
+VPY R ST +K LS R AL VT + +N ++ S LP+ P+K
Sbjct: 405 VVPYHRVKLSTSTLKDKLSMFDPRFA-ALMVTPIQVDEN-------KRLTSQLPVRTPQK 456
Query: 71 KECVS 75
K +S
Sbjct: 457 KRVLS 461
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.134 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,334,645
Number of Sequences: 59808
Number of extensions: 304720
Number of successful extensions: 833
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 827
Number of HSP's gapped (non-prelim): 13
length of query: 216
length of database: 16,821,457
effective HSP length: 79
effective length of query: 137
effective length of database: 12,096,625
effective search space: 1657237625
effective search space used: 1657237625
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 58 (27.5 bits)
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