GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000413-TA|BGIBMGA000413-PA|undefined
         (216 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    28   0.19 
AY062203-1|AAL58564.1|  149|Anopheles gambiae cytochrome P450 CY...    27   0.57 
DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.       24   4.0  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   5.3  
AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450 CY...    23   7.0  
AY062205-1|AAL58566.1|  154|Anopheles gambiae cytochrome P450 CY...    23   9.3  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   9.3  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 28.3 bits (60), Expect = 0.19
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 74  VSKTADISGIGVTSVYSVLKEHKENEQFKSPEKRGPKHSFKDKL 117
           VS T D     VT++   +K+HKE    +S E +   H  +DKL
Sbjct: 855 VSGTTDEMTAAVTALKQQIKQHKEKMNSQSKELKAKYHQ-RDKL 897


>AY062203-1|AAL58564.1|  149|Anopheles gambiae cytochrome P450
           CYP4C25 protein.
          Length = 149

 Score = 26.6 bits (56), Expect = 0.57
 Identities = 14/49 (28%), Positives = 23/49 (46%)

Query: 63  LPIEAPEKKECVSKTADISGIGVTSVYSVLKEHKENEQFKSPEKRGPKH 111
           +P+ A    E V     +   G T++  V + H+  E F +P+K  P H
Sbjct: 75  VPLIARRLTEDVDIDGYVLPAGTTAMIVVYQLHRNPEVFPNPDKFNPDH 123


>DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.
          Length = 595

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 11/82 (13%)

Query: 12  VPYKRYGSSTKHVKPNLSPRKKRTRIALSVTEKVMIQNVYKHVFEEKAASLLPIEAPEKK 71
           +PYK   S+   + PN S R K  ++   +T +V+     K + E  A     I  P  K
Sbjct: 292 IPYKHNVSTMYVIMPNNSNRAKLQQLIPKLTSEVV-----KDLIENMAIKTSIILFP--K 344

Query: 72  ECVSKTADISGI----GVTSVY 89
             +S T D+  +    GV+S++
Sbjct: 345 MHISNTMDLKRVLQQLGVSSLF 366


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse
          transcriptase protein.
          Length = 1222

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 7/10 (70%), Positives = 9/10 (90%)

Query: 4  VVFICCYIVP 13
          V+FICCY+ P
Sbjct: 83 VLFICCYVSP 92


>AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450
           CYP6M4 protein.
          Length = 424

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 12/41 (29%), Positives = 18/41 (43%)

Query: 70  KKECVSKTADISGIGVTSVYSVLKEHKENEQFKSPEKRGPK 110
           K   V  T  +   G + +  VL  H + E F  PE+  P+
Sbjct: 319 KDYIVPGTTSVLEAGTSVMIPVLGIHHDPEHFPEPERFDPE 359


>AY062205-1|AAL58566.1|  154|Anopheles gambiae cytochrome P450
           CYP4C26 protein.
          Length = 154

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 8/26 (30%), Positives = 15/26 (57%)

Query: 84  GVTSVYSVLKEHKENEQFKSPEKRGP 109
           G T++  V + H++   F +P+K  P
Sbjct: 96  GTTAMIVVYELHRDTSVFSNPDKFNP 121


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 13/47 (27%), Positives = 22/47 (46%)

Query: 27  NLSPRKKRTRIALSVTEKVMIQNVYKHVFEEKAASLLPIEAPEKKEC 73
           NL+  K  T++ L   EK+  + +      +++ S L I   E K C
Sbjct: 451 NLATLKDETKVLLEEKEKLQTELIELKRAVDESKSALSIAESELKIC 497


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.134    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,548
Number of Sequences: 2123
Number of extensions: 8149
Number of successful extensions: 68
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61
Number of HSP's gapped (non-prelim): 7
length of query: 216
length of database: 516,269
effective HSP length: 61
effective length of query: 155
effective length of database: 386,766
effective search space: 59948730
effective search space used: 59948730
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 46 (22.6 bits)