Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000413-TA|BGIBMGA000413-PA|undefined
(216 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 33 0.21
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 33 0.21
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 33 0.21
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 33 0.21
Z80223-5|CAB02321.1| 153|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z22176-2|CAD91716.1| 626|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z22176-11|CAA80141.1| 784|Caenorhabditis elegans Hypothetical p... 29 3.4
X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin pr... 29 3.4
AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin ... 29 3.4
AC006701-4|AAK68403.2| 606|Caenorhabditis elegans Hypothetical ... 29 3.4
Z35597-3|CAA84646.2| 498|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z77132-5|CAB00863.2| 1423|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z69793-3|CAA93672.2| 709|Caenorhabditis elegans Hypothetical pr... 28 5.9
AF040654-1|AAK21448.1| 1236|Caenorhabditis elegans Hypothetical ... 28 5.9
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 32.7 bits (71), Expect = 0.21
Identities = 33/122 (27%), Positives = 48/122 (39%), Gaps = 3/122 (2%)
Query: 25 KPNLSPRKKRTRIALSVTEKVMIQNVYKHVFEEKAASLLPIEAPEKKECVSKTADISGIG 84
KP SP KK S+TE++ V K EK P +K++ K A +
Sbjct: 1538 KPK-SPTKKDKSPEKSITEEIK-SPVKKEKSPEKVEEK-PASPTKKEKSPEKPASPTKKS 1594
Query: 85 VTSVYSVLKEHKENEQFKSPEKRGPKHSFKDKLDDFTFAAIRTLFDGASDTFEKLKSIER 144
V S K+ K E+ E + PK +K DD + + E +KS +
Sbjct: 1595 ENEVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKKEKSPEKSATEDVKSPTK 1654
Query: 145 KE 146
KE
Sbjct: 1655 KE 1656
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 32.7 bits (71), Expect = 0.21
Identities = 33/122 (27%), Positives = 48/122 (39%), Gaps = 3/122 (2%)
Query: 25 KPNLSPRKKRTRIALSVTEKVMIQNVYKHVFEEKAASLLPIEAPEKKECVSKTADISGIG 84
KP SP KK S+TE++ V K EK P +K++ K A +
Sbjct: 1538 KPK-SPTKKDKSPEKSITEEIK-SPVKKEKSPEKVEEK-PASPTKKEKSPEKPASPTKKS 1594
Query: 85 VTSVYSVLKEHKENEQFKSPEKRGPKHSFKDKLDDFTFAAIRTLFDGASDTFEKLKSIER 144
V S K+ K E+ E + PK +K DD + + E +KS +
Sbjct: 1595 ENEVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKKEKSPEKSATEDVKSPTK 1654
Query: 145 KE 146
KE
Sbjct: 1655 KE 1656
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 32.7 bits (71), Expect = 0.21
Identities = 33/122 (27%), Positives = 48/122 (39%), Gaps = 3/122 (2%)
Query: 25 KPNLSPRKKRTRIALSVTEKVMIQNVYKHVFEEKAASLLPIEAPEKKECVSKTADISGIG 84
KP SP KK S+TE++ V K EK P +K++ K A +
Sbjct: 1538 KPK-SPTKKDKSPEKSITEEIK-SPVKKEKSPEKVEEK-PASPTKKEKSPEKPASPTKKS 1594
Query: 85 VTSVYSVLKEHKENEQFKSPEKRGPKHSFKDKLDDFTFAAIRTLFDGASDTFEKLKSIER 144
V S K+ K E+ E + PK +K DD + + E +KS +
Sbjct: 1595 ENEVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKKEKSPEKSATEDVKSPTK 1654
Query: 145 KE 146
KE
Sbjct: 1655 KE 1656
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 32.7 bits (71), Expect = 0.21
Identities = 33/122 (27%), Positives = 48/122 (39%), Gaps = 3/122 (2%)
Query: 25 KPNLSPRKKRTRIALSVTEKVMIQNVYKHVFEEKAASLLPIEAPEKKECVSKTADISGIG 84
KP SP KK S+TE++ V K EK P +K++ K A +
Sbjct: 1538 KPK-SPTKKDKSPEKSITEEIK-SPVKKEKSPEKVEEK-PASPTKKEKSPEKPASPTKKS 1594
Query: 85 VTSVYSVLKEHKENEQFKSPEKRGPKHSFKDKLDDFTFAAIRTLFDGASDTFEKLKSIER 144
V S K+ K E+ E + PK +K DD + + E +KS +
Sbjct: 1595 ENEVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKKEKSPEKSATEDVKSPTK 1654
Query: 145 KE 146
KE
Sbjct: 1655 KE 1656
>Z80223-5|CAB02321.1| 153|Caenorhabditis elegans Hypothetical
protein F26D10.12 protein.
Length = 153
Score = 29.5 bits (63), Expect = 1.9
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 99 EQFKSPEKRGPKHSFKDKLDDFTFAAIRTLFDGASDTFEKLKSIERKEGIYYQDETWINE 158
E K+ EKRG K D D F F A+R LF T+ + + E E +Y E +N
Sbjct: 52 ESVKNCEKRGAKLFHFD--DSFEFEAVRNLFPDYYFTWMQAEVEEELEWLYEPYEEKMNG 109
Query: 159 GHAPKK 164
++ K
Sbjct: 110 KNSAAK 115
>Z22176-2|CAD91716.1| 626|Caenorhabditis elegans Hypothetical
protein ZK1098.2 protein.
Length = 626
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 166 WIDQTVSSSRQAFLDGLTTGLKQPLGKGKRLIISHIGGEEGLVEDSLLIF 215
WI +T+ +LD + LK P+ KG +I G + ++D+ IF
Sbjct: 171 WIRKTMKEKSCQYLDNIGAELKDPVSKGDACLILDYGRQ---LDDTFSIF 217
>Z22176-11|CAA80141.1| 784|Caenorhabditis elegans Hypothetical
protein ZK1098.3 protein.
Length = 784
Score = 28.7 bits (61), Expect = 3.4
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 55 FEEKAASLLPIEAPEKKECVSKTADISGIGVTSVY-SVLKEHKENEQFKSPEKRGPKHSF 113
+ +K A L ++ P+ +E + + IS V + S ++E+ EN++FK + KH
Sbjct: 132 YYQKKAGLACVKEPKNEEYLLQIFKISKEFVIDLRKSKVQEYLENQKFKEAAEIVMKH-- 189
Query: 114 KDKLDDFTFAAI 125
+ +DD++F I
Sbjct: 190 -EVVDDYSFEQI 200
>X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin
protein.
Length = 395
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 132 ASDTFEKLKSIERKEGIYYQDETWINEGHAPKKA 165
A++TF+KLK++E+++ +ET E A KKA
Sbjct: 338 AAETFDKLKTVEKEKKEKADEETRKAEEEARKKA 371
>AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin
protein 1 protein.
Length = 395
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 132 ASDTFEKLKSIERKEGIYYQDETWINEGHAPKKA 165
A++TF+KLK++E+++ +ET E A KKA
Sbjct: 338 AAETFDKLKTVEKEKKEKADEETRKAEEEARKKA 371
>AC006701-4|AAK68403.2| 606|Caenorhabditis elegans Hypothetical
protein Y104H12D.3 protein.
Length = 606
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 23 HVKPNLSPRKKRTRIALSVTEKVMIQNVYKHVFEEKAASLLPIEAPEKKECVSKTA 78
HV P LSP R I+LS+ E + V H E+ ++ +++ E E + TA
Sbjct: 468 HVDPLLSPAAARVPISLSMCE----EGVLDHFLEDLEMAICNLKSMEPAEKLGTTA 519
>Z35597-3|CAA84646.2| 498|Caenorhabditis elegans Hypothetical
protein C36E8.3 protein.
Length = 498
Score = 28.3 bits (60), Expect = 4.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 149 YYQDETWINEGHAPKKAWID 168
YYQ ET++ +G KK WI+
Sbjct: 106 YYQAETFVGDGETLKKYWIN 125
>Z77132-5|CAB00863.2| 1423|Caenorhabditis elegans Hypothetical protein
F54D1.6 protein.
Length = 1423
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 3 IVVFICCYIVPYKRYGSSTKHVKPNLSPRKKRT 35
I++F+CC+IV K+ G + + +++ R T
Sbjct: 1337 ILIFLCCWIVKQKKKGEAAERRGYDMASRSSMT 1369
>Z69793-3|CAA93672.2| 709|Caenorhabditis elegans Hypothetical
protein R03A10.3 protein.
Length = 709
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 91 VLKEHKENEQFKSPEKRGPKHSFKDKLDD 119
V++ + ++EQF++P+K+GP +F K D
Sbjct: 313 VVEIYSQSEQFENPDKQGPIVAFNLKRPD 341
>AF040654-1|AAK21448.1| 1236|Caenorhabditis elegans Hypothetical
protein R06B10.1 protein.
Length = 1236
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 13 PYKRYGSSTKHVKPNLSPRKKRTRIALSVTEKVMIQNVYKHVFEEKAASLLPIEAPEKKE 72
P GSS K NL+ R + ++ SV + MI + ++ ++ SL+ P +E
Sbjct: 75 PLNSTGSSIKEFHHNLTRRATKEELSKSVNQMHMISRIINGIYLQQ--SLVNNTIP-SEE 131
Query: 73 CVSKTADISGIGVTSVYSV 91
+S+ +I + + + +
Sbjct: 132 LISELLNIGSLTTSQIVGI 150
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.316 0.134 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,478,944
Number of Sequences: 27539
Number of extensions: 232238
Number of successful extensions: 648
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 642
Number of HSP's gapped (non-prelim): 14
length of query: 216
length of database: 12,573,161
effective HSP length: 79
effective length of query: 137
effective length of database: 10,397,580
effective search space: 1424468460
effective search space used: 1424468460
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 58 (27.5 bits)
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