Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000411-TA|BGIBMGA000411-PA|IPR013818|Lipase, N-terminal,
IPR002197|Helix-turn-helix, Fis-type, IPR000734|Lipase
(251 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_26408| Best HMM Match : Lipase (HMM E-Value=0) 46 2e-05
SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41) 46 2e-05
SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07) 36 0.024
SB_30050| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52
SB_50451| Best HMM Match : Avirulence (HMM E-Value=0.14) 31 0.91
SB_2178| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_14689| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_46414| Best HMM Match : Extensin_2 (HMM E-Value=0.31) 28 8.5
SB_24285| Best HMM Match : Glyco_transf_10 (HMM E-Value=6e-31) 28 8.5
>SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 940
Score = 49.2 bits (112), Expect = 3e-06
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 36 GQSVANIRLVGV-MTAHLI----HNIYKFNLKLGRITGLDPAAPYFSRTVTLVRLDRSDA 90
G + A+ LVG + AH+ I K KL RITGLDPA+ +F VRLD SDA
Sbjct: 683 GNTPASFYLVGFSLGAHISGYVGRRIAKTGQKLNRITGLDPASIHFVNAHVDVRLDPSDA 742
Query: 91 KYVDIIHSN 99
+VD++H++
Sbjct: 743 DFVDVMHTD 751
>SB_26408| Best HMM Match : Lipase (HMM E-Value=0)
Length = 714
Score = 46.4 bits (105), Expect = 2e-05
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 11/85 (12%)
Query: 36 GQSVANIRLVGV-MTAHLIHNIYKFNLKLGR----ITGLDPAAPYFSRTVTLVRLDRSDA 90
G+ +A + ++G AH+ + + K GR IT LDPAA +F + VRLD SDA
Sbjct: 185 GRKLAYVHVIGFSFGAHVAGYVGRRMKKRGRMIDRITALDPAAMWFHKHHEDVRLDTSDA 244
Query: 91 KYVDIIHSNAMPLYFSGFGISEPIG 115
+VD+IH++A +GI+ IG
Sbjct: 245 LFVDVIHTSA------DYGITSTIG 263
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/32 (56%), Positives = 23/32 (71%)
Query: 22 VIIVDWRGGSQPPYGQSVANIRLVGVMTAHLI 53
VIIVDW G+ P+ ++VAN RLVG TA L+
Sbjct: 146 VIIVDWMRGAWFPFTRAVANTRLVGAQTARLL 177
>SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)
Length = 291
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/53 (49%), Positives = 33/53 (62%), Gaps = 6/53 (11%)
Query: 63 LGRITGLDPAAPYFSRTVTLVRLDRSDAKYVDIIHSNAMPLYFSGFGISEPIG 115
L RITGLDPA F VRLDR DA++VD+IH++ + FGI+ P G
Sbjct: 199 LDRITGLDPATLMFKGEAPDVRLDRLDAQFVDVIHTSYV------FGITAPHG 245
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 22 VIIVDWRGGSQPPYGQSVANIRLVGVMTAHLIHNI 56
VIIVDW G++ PY ++VAN RLVG A + I
Sbjct: 127 VIIVDWIRGAKIPYVRAVANTRLVGAQVAAFMKTI 161
>SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07)
Length = 408
Score = 36.3 bits (80), Expect = 0.024
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 69 LDPAAPYFSRTVTLVRLDRSDAKYVDIIHSN 99
LDPA YF VRLD SDA++VD++H++
Sbjct: 2 LDPAGLYFVNEHVDVRLDPSDAEFVDVMHTD 32
>SB_30050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 31.9 bits (69), Expect = 0.52
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 4 IENLANALLDIDGNESATVIIVDWRGGSQPPYGQSVANIRLVG 46
+ ++ ALL D V+I DW G+ Y Q+ AN RLVG
Sbjct: 120 VGHMRQALLQKD---DVNVVITDWGPGADGMYWQATANTRLVG 159
>SB_50451| Best HMM Match : Avirulence (HMM E-Value=0.14)
Length = 1085
Score = 31.1 bits (67), Expect = 0.91
Identities = 23/113 (20%), Positives = 43/113 (38%), Gaps = 5/113 (4%)
Query: 125 YYKPGEIETKMLAFQDAGNPPLYVIVEWKYEASLFNPMTWRLIKSPSIFIEYIKLSSIEY 184
YY+P E + ++L + V W + + P+ + PS +++ +
Sbjct: 225 YYRPLEQQQQLLLPSPGTTTTTTITVPWNNNNNYYRPLEQQQQLLPSPGTSTTTTTTVPW 284
Query: 185 -NTEKYYKPGEIETKMLAFQDAGNPPLYVIVEWKYEASLFNPM--TWRLIKSP 234
N YY+P +E + L G V W + P+ +L+ SP
Sbjct: 285 NNNNNYYRP--LEQQQLLLPSPGTTTTTTTVPWNNNNYYYRPLEQQQQLLASP 335
>SB_2178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 53
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 22 VIIVDWRGGSQPPYGQSVANIRL 44
VIIVDW G+ P+ ++VAN RL
Sbjct: 31 VIIVDWMRGAWFPFTRAVANTRL 53
>SB_14689| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1900
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 156 ASLFNPMTWRLIKSPSIFIEYIKLSSIEYNTEKYYKPGEIETKMLAFQDAGNP 208
A +FN MT + K PS+ +E I IEY E+ K +I+ + GNP
Sbjct: 98 AGVFNMMTKLVEKMPSV-VERILDQCIEYEGEETNKDFKIKYDLSVLLCKGNP 149
>SB_46414| Best HMM Match : Extensin_2 (HMM E-Value=0.31)
Length = 469
Score = 27.9 bits (59), Expect = 8.5
Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 9/93 (9%)
Query: 109 GISEPIGVPGGDCELKYYKPGEIETKMLAFQDAGNPPLYVIVEWKYEASLFNPMTWRLIK 168
G +P P G+ + +YY G ++++ F +GNP WK S + I
Sbjct: 28 GNPQPRYYPSGNPQSRYYPSGNLQSR---FYPSGNPQSRYYPSWK---STVQELPLLEIH 81
Query: 169 SPSIFIEYIK---LSSIEYNTEKYYKPGEIETK 198
SP I + I ++ + +YY G +++
Sbjct: 82 SPGITLLEIHSPGITPLGNPQSRYYPSGNSQSR 114
>SB_24285| Best HMM Match : Glyco_transf_10 (HMM E-Value=6e-31)
Length = 414
Score = 27.9 bits (59), Expect = 8.5
Identities = 19/84 (22%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 166 LIKSPSIFIEYIKLSSIEYNTEKYYKPGEIETKMLAFQDAGNPPLYVIVEWKYEASLFNP 225
L++ + + + ++Y TEKY+KP +ET + G ++V Y N
Sbjct: 278 LLRRYKFRLSFENKNCVDYITEKYWKP--LETGNIPIVLGGANYSEMVVPGSY----INA 331
Query: 226 MTWRLIKSPSIFIEYIKLSSIEYN 249
+ + +K+ + +I+Y+ + YN
Sbjct: 332 LDFPSVKALAEYIKYLDKNDTAYN 355
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.139 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,774,697
Number of Sequences: 59808
Number of extensions: 345343
Number of successful extensions: 471
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 462
Number of HSP's gapped (non-prelim): 14
length of query: 251
length of database: 16,821,457
effective HSP length: 80
effective length of query: 171
effective length of database: 12,036,817
effective search space: 2058295707
effective search space used: 2058295707
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 59 (27.9 bits)
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