Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000411-TA|BGIBMGA000411-PA|IPR013818|Lipase, N-terminal,
IPR002197|Helix-turn-helix, Fis-type, IPR000734|Lipase
(251 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical pr... 29 4.2
AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal t... 29 4.2
AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal t... 29 4.2
AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein ... 29 4.2
Z81035-9|CAB02734.1| 628|Caenorhabditis elegans Hypothetical pr... 28 7.3
U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical pr... 27 9.6
AF125952-7|AAD14695.1| 352|Caenorhabditis elegans Seven tm rece... 27 9.6
AF045638-5|AAC02562.3| 544|Caenorhabditis elegans Hypothetical ... 27 9.6
AC006722-13|AAK68415.2| 352|Caenorhabditis elegans Hypothetical... 27 9.6
>Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical
protein W09D6.6 protein.
Length = 801
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Query: 180 SSIEYNTEKYYKPGEIETKMLAFQDAGNPPLYVIVEWKYEASL 222
S I Y T KYY G E ++ F++A Y + EWK +ASL
Sbjct: 415 SLINYETVKYY--GNEEFEVNRFKNAIES--YQVTEWKTQASL 453
>AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Query: 180 SSIEYNTEKYYKPGEIETKMLAFQDAGNPPLYVIVEWKYEASL 222
S I Y T KYY G E ++ F++A Y + EWK +ASL
Sbjct: 415 SLINYETVKYY--GNEEFEVNRFKNAIES--YQVTEWKTQASL 453
>AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Query: 180 SSIEYNTEKYYKPGEIETKMLAFQDAGNPPLYVIVEWKYEASL 222
S I Y T KYY G E ++ F++A Y + EWK +ASL
Sbjct: 415 SLINYETVKYY--GNEEFEVNRFKNAIES--YQVTEWKTQASL 453
>AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein
protein.
Length = 801
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Query: 180 SSIEYNTEKYYKPGEIETKMLAFQDAGNPPLYVIVEWKYEASL 222
S I Y T KYY G E ++ F++A Y + EWK +ASL
Sbjct: 415 SLINYETVKYY--GNEEFEVNRFKNAIES--YQVTEWKTQASL 453
>Z81035-9|CAB02734.1| 628|Caenorhabditis elegans Hypothetical
protein C15H11.3 protein.
Length = 628
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 28 RGGSQPPYGQSVANIRLVGVMTAHLIH 54
RGGS +GQS A+I GV A +++
Sbjct: 74 RGGSSRGFGQSAASIANTGVRNADIVY 100
>U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical
protein C56E6.6 protein.
Length = 1102
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 41 NIRLVGVMTAHLIHNIYKFNLKLGRITGLDPAAPYFSRTVTLVRLDRSDAKYVD 94
NIR + MT + N+ +L RI + P+A Y + ++ LD ++ +D
Sbjct: 475 NIRTITSMTFSNLRNLRYLDLSHNRIIKILPSALYQLPALDVLHLDHNNLNEID 528
>AF125952-7|AAD14695.1| 352|Caenorhabditis elegans Seven tm
receptor protein 258 protein.
Length = 352
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Query: 18 ESATVIIVDWRGGSQPPYGQSVANIRLVGVMTAHL----IHNIYKF 59
ESA +II++WR P Y N+ +G + +H IY++
Sbjct: 67 ESAFLIIMNWRESIFPKYAACTLNLLFIGFFGMSVAILALHFIYRY 112
>AF045638-5|AAC02562.3| 544|Caenorhabditis elegans Hypothetical
protein C35B1.2a protein.
Length = 544
Score = 27.5 bits (58), Expect = 9.6
Identities = 20/90 (22%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Query: 104 YFSGFGISEPIGVPGGDCELKY-----YKPGE--IETKMLAFQDAGNPPLYVIVEWKYEA 156
Y G G + P+ D LK+ + E I ++ ++ G P + E + E
Sbjct: 213 YVLGVGRARPLMTQKNDHNLKHIFISGFDKDEHMIPYVVICYEWMGQPHPLTVYEDQTEK 272
Query: 157 SLFNPMTWRLIKSPSIFIEYIKLSSIEYNT 186
F MTW+ +P + + +YN+
Sbjct: 273 QAFEQMTWKKCSNPEDQVPILARHGCDYNS 302
>AC006722-13|AAK68415.2| 352|Caenorhabditis elegans Hypothetical
protein Y19D10A.2 protein.
Length = 352
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Query: 18 ESATVIIVDWRGGSQPPYGQSVANIRLVGVMTAHL----IHNIYKF 59
ESA +II++WR P Y N+ +G + +H IY++
Sbjct: 67 ESAFLIIMNWRESIFPKYAACTLNLLFIGFFGMSVAILALHFIYRY 112
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.139 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,666,298
Number of Sequences: 27539
Number of extensions: 287932
Number of successful extensions: 478
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 475
Number of HSP's gapped (non-prelim): 14
length of query: 251
length of database: 12,573,161
effective HSP length: 80
effective length of query: 171
effective length of database: 10,370,041
effective search space: 1773277011
effective search space used: 1773277011
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 58 (27.5 bits)
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