Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000410-TA|BGIBMGA000410-PA|undefined
         (519 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    25   1.7  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    25   1.7  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    25   1.7  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    25   1.7  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    25   1.7  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   9.0  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    22   9.0  

>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 348 LKFLTENVSQYGRATNDVTKVGDDCSTSF 376
           LKF+ + +  +G   + +T  GD  S +F
Sbjct: 176 LKFIKKYIQHFGGTPDSITLFGDGTSVNF 204


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 348 LKFLTENVSQYGRATNDVTKVGDDCSTSF 376
           LKF+ + +  +G   + +T  GD  S +F
Sbjct: 176 LKFIKKYIQHFGGTPDSITLFGDGTSVNF 204


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 348 LKFLTENVSQYGRATNDVTKVGDDCSTSF 376
           LKF+ + +  +G   + +T  GD  S +F
Sbjct: 176 LKFIKKYIQHFGGTPDSITLFGDGTSVNF 204


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 348 LKFLTENVSQYGRATNDVTKVGDDCSTSF 376
           LKF+ + +  +G   + +T  GD  S +F
Sbjct: 176 LKFIKKYIQHFGGTPDSITLFGDGTSANF 204


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 348 LKFLTENVSQYGRATNDVTKVGDDCSTSF 376
           LKF+ + +  +G   + +T  GD  S +F
Sbjct: 176 LKFIKKYIQHFGGTPDSITLFGDGTSVNF 204


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 7/35 (20%), Positives = 18/35 (51%)

Query: 218 KLDFSMDISFEESAHDQSQADSESSSHPDAQATWS 252
           +  FS  + +  + H+++Q+      HP++ +  S
Sbjct: 78  RFKFSSSVGWSPAGHEEAQSPHRIYMHPESPSKGS 112


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 9/30 (30%), Positives = 17/30 (56%)

Query: 346 VDLKFLTENVSQYGRATNDVTKVGDDCSTS 375
           +DLK++ EN+  +    N+VT  G+    +
Sbjct: 167 LDLKWVQENIIHFCGDPNNVTIFGESAGAA 196


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.312    0.126    0.361 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,321
Number of Sequences: 317
Number of extensions: 4063
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 7
length of query: 519
length of database: 114,650
effective HSP length: 60
effective length of query: 459
effective length of database: 95,630
effective search space: 43894170
effective search space used: 43894170
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 45 (22.2 bits)