Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000410-TA|BGIBMGA000410-PA|undefined
(519 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_58681| Best HMM Match : MAP65_ASE1 (HMM E-Value=3.3e-26) 35 0.14
SB_25374| Best HMM Match : DUF1087 (HMM E-Value=3.2) 32 0.97
SB_22450| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.9
SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.2
SB_56825| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.9
SB_5063| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.9
SB_35933| Best HMM Match : CIMR (HMM E-Value=6.3e-14) 29 9.1
SB_3188| Best HMM Match : Hyd_WA (HMM E-Value=2e-13) 29 9.1
>SB_58681| Best HMM Match : MAP65_ASE1 (HMM E-Value=3.3e-26)
Length = 631
Score = 35.1 bits (77), Expect = 0.14
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 338 HKKIDFNNVD-LKFLTENVSQYGRATNDVT-KVGDDCSTSFKRVDSGFNENTFYASTSYY 395
H ++ N+D LK L + Q RA + K+ DDC + +K+++ +E A T+ +
Sbjct: 155 HFELSAVNLDALKVLQLELEQQQRANCETAAKLLDDCKSLWKKLE--VDEEEQEAFTAKW 212
Query: 396 ESAIKPSELTVTNISKSNVTNNALKEIS---NVHWMRVDSGFKDE 437
+ KPS + N+ + TN+ LKE + NV D KDE
Sbjct: 213 KG-FKPSTIAALNLLANQQTNSELKEYNSKKNVTENVSDPTMKDE 256
>SB_25374| Best HMM Match : DUF1087 (HMM E-Value=3.2)
Length = 144
Score = 32.3 bits (70), Expect = 0.97
Identities = 28/143 (19%), Positives = 61/143 (42%), Gaps = 4/143 (2%)
Query: 371 DCSTSFKRVDSGFNENTFYASTSYYESAIKPSELTVTNISKSNVTNNALKEISNVHWMRV 430
D S + N N+ ++ S S+ + ++ S S+ +N+ + N + ++
Sbjct: 4 DSDNSDSDTSNSDNSNSDNLNSDNLNSDKLKSDNSNSDNSNSDNSNSDKLKSDNSNSEKL 63
Query: 431 DSGFKDENSADSIQFYPGNENSVKKFSNVEETEMKLANKEGTADDFDRFLVQSCNKDAMS 490
+S D N+++S N NS N ++KL N + D+ + + N D ++
Sbjct: 64 NSNNSDSNNSNSDNSNSDNSNS----DNSNSDKLKLVNSNPDNSNSDKLKLVNSNSDKLN 119
Query: 491 MSDIFTDDMTFNCNFSSTPSKNK 513
+ +D+ + + S + NK
Sbjct: 120 SDNSNSDNSNSDNSNSDNSNSNK 142
>SB_22450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2806
Score = 30.3 bits (65), Expect = 3.9
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 345 NVDLKFLTENVSQYGRATNDVTKVGDDCSTSF---KRVDSGFNENTFYASTSYYESAIKP 401
N DL ++T + ++G N ST+ R D+G E T+ T Y E ++KP
Sbjct: 928 NPDLFYMTTHQREFG-GDNGAPAANARPSTAKIFPSRDDAG--ETTY--QTEYCEKSVKP 982
Query: 402 SELTVTNISKSNVTNN 417
+E+T S N NN
Sbjct: 983 NEMTRVGTSSGNRRNN 998
>SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1584
Score = 29.9 bits (64), Expect = 5.2
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Query: 225 ISFEESAHDQSQADSESSSHPDAQATWSIVEETNAQQAVR--DGCIKLQTNEIQSSTRXX 282
+SF+ S+ DQS ++ +S P QA + E + QA+R G + + E+QS +
Sbjct: 923 LSFQ-SSKDQSFTFNDQTSQPGEQAPYLPASEQPSNQALRAPQGAVSYASPEVQSEDQQA 981
Query: 283 XXXXXXXLDDTPIKG 297
L + G
Sbjct: 982 SQQDQQVLSSYSVPG 996
>SB_56825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 298
Score = 29.5 bits (63), Expect = 6.9
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 436 DENSADSIQFYPGNENSVKKFSNVEETEMKLANKEGTADDFDRFL 480
++NS DS Q GN+N K S+ + + L +KE D++ L
Sbjct: 100 NKNSIDSEQDSAGNDNDKKAMSDKTDKDSLLRSKERKGADYENSL 144
>SB_5063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 29.5 bits (63), Expect = 6.9
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 5/108 (4%)
Query: 369 GDDCSTSFKRVDSGFNENTFYASTSYYESAIKPSELTVTNISKSNVTNNALKEISNVHWM 428
G +T F R + F+ T + Y +S I+PS+ + + I V + ++ S +H
Sbjct: 24 GPGPTTEFFR-SAWFDRKTIASIEIYLKSEIRPSQQSKSEIRARIVNKSVIRRTSKIH-Q 81
Query: 429 RVDSGFKDENSADSIQF-YPGNENSVKK--FSNVEETEMKLANKEGTA 473
+ FK N S+ F PG+ + + EE LA + T+
Sbjct: 82 SSEIIFKICNPLTSVYFLLPGSAELTNEDVEKDAEENARHLAGDDRTS 129
>SB_35933| Best HMM Match : CIMR (HMM E-Value=6.3e-14)
Length = 644
Score = 29.1 bits (62), Expect = 9.1
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 395 YESAIKPSELTVTNISKS-NVTNNALKEISNVHWMRVDSGFKDENSADSIQFYPGNENSV 453
Y AI TVTN K+ N N +I+N+H S + +S F GN NS
Sbjct: 150 YACAINDVNQTVTNDCKATNPVTNYQFDINNLHCGDKSSSCQLLSSDPKFHFNAGNTNSQ 209
Query: 454 KKFSN 458
+F++
Sbjct: 210 IRFAD 214
>SB_3188| Best HMM Match : Hyd_WA (HMM E-Value=2e-13)
Length = 1389
Score = 29.1 bits (62), Expect = 9.1
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 405 TVTNISKSNVTNNALKEISNVHWMRVDSGFKDE-NSAD 441
TV N NV++N +EIS++ +DSG K E NS D
Sbjct: 382 TVPNCVNKNVSDNITEEISDIS-SELDSGSKSEPNSGD 418
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.312 0.126 0.361
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,761,660
Number of Sequences: 59808
Number of extensions: 604682
Number of successful extensions: 1256
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1254
Number of HSP's gapped (non-prelim): 8
length of query: 519
length of database: 16,821,457
effective HSP length: 85
effective length of query: 434
effective length of database: 11,737,777
effective search space: 5094195218
effective search space used: 5094195218
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 62 (29.1 bits)
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