GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000410-TA|BGIBMGA000410-PA|undefined
         (519 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.         27   1.6  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          25   3.7  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   4.9  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    24   8.6  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    24   8.6  

>AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.
          Length = 304

 Score = 26.6 bits (56), Expect = 1.6
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 448 GNENSVKKFSNVEETEMKLANKEGTADDFDR 478
           G   SV K  + +  E K+A  EGT DD++R
Sbjct: 120 GAPRSVVKAKHPKSQERKVAYGEGTDDDYNR 150


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 25.4 bits (53), Expect = 3.7
 Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 2/42 (4%)

Query: 383 FNENTFYASTSYYESAIKPSELTVTNISKSNVTNNALKEISN 424
           ++E TF+ S SYYE  ++  E    + S+ ++T +   + SN
Sbjct: 307 YHEPTFWCSISYYELNLRVGE--TFHASQPSITVDGFTDPSN 346


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 25.0 bits (52), Expect = 4.9
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 224 DISFEESAHDQSQADSESSSHPDAQATWSIVEETNAQQAVRDGCIKLQTNEIQ 276
           D S   S+   S +DS+SSS  D+ ++ S  E  N + +  +   K Q  E++
Sbjct: 363 DDSSSSSSSSSSDSDSDSSSSSDSSSSSSEEEAENFKISTAEQ-YKKQAKEVE 414


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 8.6
 Identities = 9/16 (56%), Positives = 12/16 (75%)

Query: 239 SESSSHPDAQATWSIV 254
           S +S+HP A+  WSIV
Sbjct: 120 SIASAHPSAEMNWSIV 135


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 24.2 bits (50), Expect = 8.6
 Identities = 13/35 (37%), Positives = 19/35 (54%)

Query: 224 DISFEESAHDQSQADSESSSHPDAQATWSIVEETN 258
           D S   S+   S +DS+SSS  D+ ++ S  E  N
Sbjct: 363 DDSSSSSSSSSSDSDSDSSSSSDSSSSSSEEEAEN 397


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.312    0.126    0.361 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 466,155
Number of Sequences: 2123
Number of extensions: 17032
Number of successful extensions: 35
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 31
Number of HSP's gapped (non-prelim): 5
length of query: 519
length of database: 516,269
effective HSP length: 67
effective length of query: 452
effective length of database: 374,028
effective search space: 169060656
effective search space used: 169060656
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 50 (24.2 bits)